EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023381 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2260 bases
Position: chrHT000075.1:323440-325699
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014454	RNA_pol_Rpb2_7	PF04560.20	1.2e-35	1	1
ENSCINP00000014454	RNA_pol_Rpb2_6	PF00562.28	2.3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014454	-	1014	-	ENSCINP00000014454	205 (aa)	-	F6ZVH0

Gene Model

Click here to download ENSCING00000023381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023381	-	97	48.259	ENSGAFG00000016488	-	63	48.259	Gambusia_affinis
ENSCING00000023381	-	98	79.500	ENSHBUG00000008882	polr3b	61	79.500	Haplochromis_burtoni
ENSCING00000023381	-	100	82.927	ENSOMEG00000010619	polr3b	60	82.927	Oryzias_melastigma
ENSCING00000023381	-	100	82.439	ENSPMGG00000013671	polr3b	60	82.439	Periophthalmus_magnuspinnatus
ENSCING00000023381	-	100	81.951	ENSSPUG00000004905	-	60	81.951	Sphenodon_punctatus
ENSCING00000023381	-	100	82.439	ENSSPAG00000008909	polr3b	60	82.439	Stegastes_partitus
ENSCING00000023381	-	97	48.259	ENSXCOG00000014654	-	63	48.259	Xiphophorus_couchianus