EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023441 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1191 bases
Position: chr11:2589742-2590932
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030728	NOB1_Zn_bind	PF08772.11	7.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033248	-	1191	-	ENSCINP00000030728	397 (aa)	-	H2XM46

Gene Model

Click here to download ENSCING00000023441's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023441	-	99	49.034	ENSG00000141101	NOB1	99	49.034	Homo_sapiens
ENSCING00000023441	-	84	47.701	ENSAPOG00000008241	nob1	94	46.348	Acanthochromis_polyacanthus
ENSCING00000023441	-	99	48.916	ENSAMEG00000006706	NOB1	98	46.868	Ailuropoda_melanoleuca
ENSCING00000023441	-	99	47.525	ENSACIG00000001503	nob1	99	47.561	Amphilophus_citrinellus
ENSCING00000023441	-	99	48.615	ENSAOCG00000006533	nob1	99	49.254	Amphiprion_ocellaris
ENSCING00000023441	-	99	49.370	ENSAPEG00000000032	-	99	48.775	Amphiprion_percula
ENSCING00000023441	-	99	49.370	ENSAPEG00000000029	nob1	99	48.775	Amphiprion_percula
ENSCING00000023441	-	99	46.898	ENSATEG00000014585	nob1	99	47.395	Anabas_testudineus
ENSCING00000023441	-	99	48.325	ENSACAG00000003697	NOB1	86	48.009	Anolis_carolinensis
ENSCING00000023441	-	99	49.760	ENSANAG00000036611	NOB1	99	47.775	Aotus_nancymaae
ENSCING00000023441	-	91	56.459	ENSACLG00000024897	nob1	99	44.676	Astatotilapia_calliptera
ENSCING00000023441	-	94	43.458	ENSAMXG00000003642	nob1	99	44.186	Astyanax_mexicanus
ENSCING00000023441	-	99	49.880	ENSBTAG00000020633	NOB1	99	48.357	Bos_taurus
ENSCING00000023441	-	98	31.841	WBGene00021843	Y54E10BR.4	97	32.918	Caenorhabditis_elegans
ENSCING00000023441	-	99	48.792	ENSCJAG00000015230	NOB1	99	48.936	Callithrix_jacchus
ENSCING00000023441	-	99	48.434	ENSCAFG00000020251	NOB1	99	47.100	Canis_familiaris
ENSCING00000023441	-	99	48.434	ENSCAFG00020020297	NOB1	99	47.100	Canis_lupus_dingo
ENSCING00000023441	-	99	50.246	ENSCHIG00000027022	NOB1	99	50.123	Capra_hircus
ENSCING00000023441	-	99	48.434	ENSTSYG00000003084	NOB1	99	48.792	Carlito_syrichta
ENSCING00000023441	-	83	47.977	ENSCAPG00000015542	NOB1	100	47.977	Cavia_aperea
ENSCING00000023441	-	99	48.544	ENSCPOG00000022538	NOB1	99	48.900	Cavia_porcellus
ENSCING00000023441	-	99	47.722	ENSCCAG00000023773	NOB1	99	47.887	Cebus_capucinus
ENSCING00000023441	-	99	48.551	ENSCATG00000039487	NOB1	99	48.551	Cercocebus_atys
ENSCING00000023441	-	83	46.491	ENSCLAG00000005926	NOB1	100	46.491	Chinchilla_lanigera
ENSCING00000023441	-	99	48.551	ENSCSAG00000004158	NOB1	99	48.551	Chlorocebus_sabaeus
ENSCING00000023441	-	99	45.585	ENSCHOG00000011047	NOB1	99	45.585	Choloepus_hoffmanni
ENSCING00000023441	-	99	49.751	ENSCPBG00000027035	NOB1	91	49.751	Chrysemys_picta_bellii
ENSCING00000023441	-	99	72.482	ENSCSAVG00000009081	-	99	72.549	Ciona_savignyi
ENSCING00000023441	-	99	49.383	ENSCGRG00001009255	Nob1	94	49.877	Cricetulus_griseus_chok1gshd
ENSCING00000023441	-	99	49.383	ENSCGRG00000010869	Nob1	99	49.877	Cricetulus_griseus_crigri
ENSCING00000023441	-	90	45.758	ENSCSEG00000019657	nob1	95	45.361	Cynoglossus_semilaevis
ENSCING00000023441	-	99	43.864	ENSDARG00000016080	nob1	99	44.545	Danio_rerio
ENSCING00000023441	-	99	49.153	ENSDNOG00000041643	NOB1	99	49.395	Dasypus_novemcinctus
ENSCING00000023441	-	99	49.510	ENSDORG00000000483	Nob1	99	49.881	Dipodomys_ordii
ENSCING00000023441	-	84	42.927	FBgn0030177	CG2972	74	43.939	Drosophila_melanogaster
ENSCING00000023441	-	57	46.639	ENSETEG00000000011	-	58	46.218	Echinops_telfairi
ENSCING00000023441	-	99	45.729	ENSEBUG00000004464	nob1	98	44.975	Eptatretus_burgeri
ENSCING00000023441	-	99	49.640	ENSEASG00005021356	NOB1	83	49.065	Equus_asinus_asinus
ENSCING00000023441	-	99	49.038	ENSECAG00000023748	NOB1	80	48.478	Equus_caballus
ENSCING00000023441	-	62	39.928	ENSEEUG00000014384	NOB1	59	39.700	Erinaceus_europaeus
ENSCING00000023441	-	100	43.243	ENSELUG00000016199	nob1	99	43.311	Esox_lucius
ENSCING00000023441	-	99	50.121	ENSFCAG00000002958	NOB1	99	49.637	Felis_catus
ENSCING00000023441	-	52	56.561	ENSFALG00000002747	NOB1	86	56.757	Ficedula_albicollis
ENSCING00000023441	-	99	48.905	ENSFDAG00000009239	NOB1	99	49.633	Fukomys_damarensis
ENSCING00000023441	-	52	55.769	ENSFHEG00000007657	nob1	69	48.352	Fundulus_heteroclitus
ENSCING00000023441	-	99	48.477	ENSGMOG00000010638	nob1	98	48.622	Gadus_morhua
ENSCING00000023441	-	99	44.159	ENSGALG00000000693	NOB1	99	45.794	Gallus_gallus
ENSCING00000023441	-	89	55.769	ENSGAFG00000006104	nob1	99	38.190	Gambusia_affinis
ENSCING00000023441	-	99	46.173	ENSGACG00000017552	nob1	99	47.160	Gasterosteus_aculeatus
ENSCING00000023441	-	99	48.166	ENSGAGG00000003902	NOB1	99	48.166	Gopherus_agassizii
ENSCING00000023441	-	99	49.275	ENSGGOG00000025456	NOB1	99	49.275	Gorilla_gorilla
ENSCING00000023441	-	100	45.966	ENSHBUG00000002580	nob1	99	46.715	Haplochromis_burtoni
ENSCING00000023441	-	99	48.681	ENSHGLG00000014260	NOB1	99	47.235	Heterocephalus_glaber_female
ENSCING00000023441	-	99	48.681	ENSHGLG00100013978	NOB1	99	47.786	Heterocephalus_glaber_male
ENSCING00000023441	-	99	43.810	ENSHCOG00000006699	nob1	99	44.787	Hippocampus_comes
ENSCING00000023441	-	86	50.962	ENSIPUG00000007579	nob1	72	51.429	Ictalurus_punctatus
ENSCING00000023441	-	99	50.369	ENSSTOG00000001204	NOB1	99	49.877	Ictidomys_tridecemlineatus
ENSCING00000023441	-	99	48.184	ENSJJAG00000015543	Nob1	99	48.578	Jaculus_jaculus
ENSCING00000023441	-	99	44.686	ENSKMAG00000018220	nob1	99	44.340	Kryptolebias_marmoratus
ENSCING00000023441	-	99	47.512	ENSLBEG00000026375	nob1	99	48.259	Labrus_bergylta
ENSCING00000023441	-	99	46.032	ENSLACG00000006973	NOB1	99	45.395	Latimeria_chalumnae
ENSCING00000023441	-	91	56.872	ENSLOCG00000001411	nob1	99	44.469	Lepisosteus_oculatus
ENSCING00000023441	-	99	47.952	ENSLAFG00000008978	NOB1	99	48.193	Loxodonta_africana
ENSCING00000023441	-	99	48.668	ENSMFAG00000030131	NOB1	99	48.668	Macaca_fascicularis
ENSCING00000023441	-	99	48.551	ENSMMUG00000006506	NOB1	99	48.551	Macaca_mulatta
ENSCING00000023441	-	99	48.551	ENSMNEG00000028829	NOB1	99	44.203	Macaca_nemestrina
ENSCING00000023441	-	99	48.551	ENSMLEG00000032913	NOB1	99	48.551	Mandrillus_leucophaeus
ENSCING00000023441	-	52	56.459	ENSMZEG00005003827	-	63	56.459	Maylandia_zebra
ENSCING00000023441	-	100	47.619	ENSMZEG00005028346	nob1	99	47.750	Maylandia_zebra
ENSCING00000023441	-	52	61.905	ENSMGAG00000008675	NOB1	77	61.905	Meleagris_gallopavo
ENSCING00000023441	-	99	47.407	ENSMAUG00000013554	Nob1	99	47.420	Mesocricetus_auratus
ENSCING00000023441	-	99	50.121	ENSMICG00000012123	NOB1	99	49.292	Microcebus_murinus
ENSCING00000023441	-	99	48.900	ENSMOCG00000010370	Nob1	99	48.900	Microtus_ochrogaster
ENSCING00000023441	-	99	46.455	ENSMMOG00000002120	nob1	99	46.506	Mola_mola
ENSCING00000023441	-	99	46.948	ENSMODG00000002677	NOB1	99	46.714	Monodelphis_domestica
ENSCING00000023441	-	99	48.485	ENSMALG00000014580	nob1	99	48.615	Monopterus_albus
ENSCING00000023441	-	99	49.140	MGP_CAROLIEiJ_G0031536	Nob1	97	49.136	Mus_caroli
ENSCING00000023441	-	99	48.889	ENSMUSG00000003848	Nob1	99	48.894	Mus_musculus
ENSCING00000023441	-	99	48.905	MGP_PahariEiJ_G0023136	Nob1	99	48.219	Mus_pahari
ENSCING00000023441	-	99	49.024	MGP_SPRETEiJ_G0032654	Nob1	97	48.456	Mus_spretus
ENSCING00000023441	-	99	48.193	ENSMPUG00000007483	NOB1	91	48.434	Mustela_putorius_furo
ENSCING00000023441	-	99	48.426	ENSMLUG00000006667	NOB1	99	48.798	Myotis_lucifugus
ENSCING00000023441	-	99	49.510	ENSNGAG00000008627	Nob1	99	49.755	Nannospalax_galili
ENSCING00000023441	-	99	48.068	ENSNLEG00000005572	NOB1	99	48.068	Nomascus_leucogenys
ENSCING00000023441	-	77	47.095	ENSOPRG00000006721	NOB1	99	47.706	Ochotona_princeps
ENSCING00000023441	-	99	48.293	ENSODEG00000014376	NOB1	99	47.901	Octodon_degus
ENSCING00000023441	-	99	43.792	ENSONIG00000003319	nob1	99	43.805	Oreochromis_niloticus
ENSCING00000023441	-	84	47.354	ENSOCUG00000004400	NOB1	100	47.075	Oryctolagus_cuniculus
ENSCING00000023441	-	99	49.505	ENSORLG00000018862	nob1	99	49.628	Oryzias_latipes
ENSCING00000023441	-	99	49.752	ENSORLG00020014687	nob1	99	49.386	Oryzias_latipes_hni
ENSCING00000023441	-	99	48.872	ENSORLG00015012156	nob1	99	48.872	Oryzias_latipes_hsok
ENSCING00000023441	-	86	57.416	ENSOMEG00000022722	nob1	74	57.416	Oryzias_melastigma
ENSCING00000023441	-	99	44.417	ENSOGAG00000004590	NOB1	99	44.417	Otolemur_garnettii
ENSCING00000023441	-	99	49.758	ENSOARG00000003606	NOB1	99	48.916	Ovis_aries
ENSCING00000023441	-	97	44.584	ENSPPAG00000003317	-	100	45.088	Pan_paniscus
ENSCING00000023441	-	99	48.551	ENSPPAG00000040257	NOB1	99	48.551	Pan_paniscus
ENSCING00000023441	-	99	48.792	ENSPPRG00000016949	NOB1	99	48.792	Panthera_pardus
ENSCING00000023441	-	99	48.792	ENSPTIG00000011234	NOB1	99	48.349	Panthera_tigris_altaica
ENSCING00000023441	-	99	48.792	ENSPTRG00000008285	NOB1	99	48.792	Pan_troglodytes
ENSCING00000023441	-	99	48.551	ENSPANG00000015858	NOB1	99	48.551	Papio_anubis
ENSCING00000023441	-	99	44.917	ENSPKIG00000020293	nob1	99	44.240	Paramormyrops_kingsleyae
ENSCING00000023441	-	100	46.154	ENSPSIG00000012477	NOB1	99	45.392	Pelodiscus_sinensis
ENSCING00000023441	-	99	47.716	ENSPMGG00000023476	nob1	99	46.734	Periophthalmus_magnuspinnatus
ENSCING00000023441	-	99	49.144	ENSPEMG00000010995	Nob1	99	47.887	Peromyscus_maniculatus_bairdii
ENSCING00000023441	-	51	59.024	ENSPCIG00000007274	-	80	59.223	Phascolarctos_cinereus
ENSCING00000023441	-	84	43.251	ENSPFOG00000000027	nob1	100	43.526	Poecilia_formosa
ENSCING00000023441	-	52	55.769	ENSPLAG00000011546	nob1	73	55.769	Poecilia_latipinna
ENSCING00000023441	-	91	55.288	ENSPMEG00000023435	nob1	99	45.700	Poecilia_mexicana
ENSCING00000023441	-	90	55.340	ENSPREG00000007675	nob1	78	55.340	Poecilia_reticulata
ENSCING00000023441	-	99	49.879	ENSPPYG00000007509	NOB1	99	49.637	Pongo_abelii
ENSCING00000023441	-	99	48.926	ENSPCAG00000001527	NOB1	99	48.449	Procavia_capensis
ENSCING00000023441	-	99	50.856	ENSPCOG00000025515	NOB1	99	51.100	Propithecus_coquereli
ENSCING00000023441	-	77	32.047	ENSPVAG00000013330	NOB1	78	30.994	Pteropus_vampyrus
ENSCING00000023441	-	91	55.981	ENSPNYG00000018449	nob1	99	46.867	Pundamilia_nyererei
ENSCING00000023441	-	98	41.190	ENSPNAG00000004244	nob1	99	41.190	Pygocentrus_nattereri
ENSCING00000023441	-	99	49.029	ENSRNOG00000021890	Nob1	99	49.165	Rattus_norvegicus
ENSCING00000023441	-	99	48.551	ENSRBIG00000019599	NOB1	99	48.792	Rhinopithecus_bieti
ENSCING00000023441	-	99	48.551	ENSRROG00000033419	NOB1	99	48.792	Rhinopithecus_roxellana
ENSCING00000023441	-	84	47.042	ENSSBOG00000029042	NOB1	90	46.049	Saimiri_boliviensis_boliviensis
ENSCING00000023441	-	99	47.743	ENSSHAG00000015387	NOB1	99	48.086	Sarcophilus_harrisii
ENSCING00000023441	-	99	44.647	ENSSFOG00015008503	nob1	99	44.647	Scleropages_formosus
ENSCING00000023441	-	99	47.215	ENSSMAG00000003064	nob1	99	46.682	Scophthalmus_maximus
ENSCING00000023441	-	99	47.585	ENSSDUG00000007307	nob1	99	47.700	Seriola_dumerili
ENSCING00000023441	-	70	58.480	ENSSLDG00000011459	-	95	57.803	Seriola_lalandi_dorsalis
ENSCING00000023441	-	87	45.504	ENSSPUG00000005621	NOB1	99	47.207	Sphenodon_punctatus
ENSCING00000023441	-	99	48.387	ENSSPAG00000022362	nob1	99	48.635	Stegastes_partitus
ENSCING00000023441	-	99	48.681	ENSSSCG00000002753	NOB1	99	48.349	Sus_scrofa
ENSCING00000023441	-	52	57.143	ENSTGUG00000008124	NOB1	93	57.143	Taeniopygia_guttata
ENSCING00000023441	-	92	53.363	ENSTRUG00000023145	nob1	99	44.368	Takifugu_rubripes
ENSCING00000023441	-	92	53.363	ENSTRUG00000004780	nob1	99	44.368	Takifugu_rubripes
ENSCING00000023441	-	99	44.146	ENSTNIG00000002552	nob1	99	45.036	Tetraodon_nigroviridis
ENSCING00000023441	-	52	57.971	ENSUAMG00000028135	NOB1	80	58.173	Ursus_americanus
ENSCING00000023441	-	99	47.711	ENSUMAG00000018658	NOB1	94	47.529	Ursus_maritimus
ENSCING00000023441	-	99	48.675	ENSVVUG00000017271	NOB1	99	47.765	Vulpes_vulpes
ENSCING00000023441	-	99	47.344	ENSXETG00000017874	nob1	98	47.344	Xenopus_tropicalis
ENSCING00000023441	-	84	45.970	ENSXCOG00000009734	nob1	100	45.858	Xiphophorus_couchianus
ENSCING00000023441	-	99	46.135	ENSXMAG00000017371	nob1	99	45.763	Xiphophorus_maculatus