EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023561 (Gene tree)
Gene ID: 100175042
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 621 bases
Position: chr1:8670696-8671316
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032282	Ribosomal_L22	PF00237.19	3.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032525	-	621	-	ENSCINP00000032282	206 (aa)	-	H2XRJ8

Gene Model

Click here to download ENSCING00000023561's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023561	-	79	38.272	ENSG00000082515	MRPL22	100	37.302	Homo_sapiens
ENSCING00000023561	-	82	34.524	ENSAPOG00000017519	mrpl22	79	34.756	Acanthochromis_polyacanthus
ENSCING00000023561	-	78	38.125	ENSAMEG00000016612	MRPL22	76	38.125	Ailuropoda_melanoleuca
ENSCING00000023561	-	82	34.524	ENSACIG00000013362	mrpl22	73	34.524	Amphilophus_citrinellus
ENSCING00000023561	-	82	33.929	ENSAOCG00000012679	mrpl22	88	33.929	Amphiprion_ocellaris
ENSCING00000023561	-	78	35.000	ENSAPEG00000006345	mrpl22	77	35.000	Amphiprion_percula
ENSCING00000023561	-	82	35.882	ENSATEG00000013930	mrpl22	86	35.882	Anabas_testudineus
ENSCING00000023561	-	84	36.994	ENSACAG00000003875	MRPL22	86	36.994	Anolis_carolinensis
ENSCING00000023561	-	77	36.709	ENSANAG00000022815	-	88	40.449	Aotus_nancymaae
ENSCING00000023561	-	77	37.975	ENSANAG00000032976	-	76	37.654	Aotus_nancymaae
ENSCING00000023561	-	82	36.310	ENSACLG00000024902	mrpl22	81	36.310	Astatotilapia_calliptera
ENSCING00000023561	-	98	32.367	ENSAMXG00000006753	mrpl22	99	32.367	Astyanax_mexicanus
ENSCING00000023561	-	79	39.506	ENSBTAG00000019457	MRPL22	79	39.506	Bos_taurus
ENSCING00000023561	-	79	38.272	ENSCJAG00000007325	MRPL22	81	38.272	Callithrix_jacchus
ENSCING00000023561	-	77	38.608	ENSCAFG00000017605	MRPL22	88	38.608	Canis_familiaris
ENSCING00000023561	-	77	38.608	ENSCAFG00020023930	MRPL22	78	38.608	Canis_lupus_dingo
ENSCING00000023561	-	79	39.506	ENSCHIG00000020523	MRPL22	77	39.506	Capra_hircus
ENSCING00000023561	-	77	38.608	ENSTSYG00000010589	-	77	38.608	Carlito_syrichta
ENSCING00000023561	-	79	37.037	ENSCAPG00000008613	MRPL22	95	35.795	Cavia_aperea
ENSCING00000023561	-	79	37.037	ENSCPOG00000006767	MRPL22	77	37.037	Cavia_porcellus
ENSCING00000023561	-	77	37.975	ENSCCAG00000000038	MRPL22	76	37.654	Cebus_capucinus
ENSCING00000023561	-	77	38.608	ENSCATG00000038763	MRPL22	77	38.608	Cercocebus_atys
ENSCING00000023561	-	77	37.342	ENSCLAG00000011777	MRPL22	77	37.342	Chinchilla_lanigera
ENSCING00000023561	-	77	38.608	ENSCSAG00000010752	MRPL22	77	38.608	Chlorocebus_sabaeus
ENSCING00000023561	-	80	37.576	ENSCPBG00000002068	MRPL22	74	37.576	Chrysemys_picta_bellii
ENSCING00000023561	-	77	37.975	ENSCANG00000039732	MRPL22	77	37.975	Colobus_angolensis_palliatus
ENSCING00000023561	-	87	34.444	ENSCGRG00001019966	Mrpl22	87	34.444	Cricetulus_griseus_chok1gshd
ENSCING00000023561	-	78	35.625	ENSCGRG00000005024	Mrpl22	78	35.625	Cricetulus_griseus_crigri
ENSCING00000023561	-	82	37.500	ENSCSEG00000020463	mrpl22	73	37.500	Cynoglossus_semilaevis
ENSCING00000023561	-	79	36.420	ENSCVAG00000021059	mrpl22	83	36.420	Cyprinodon_variegatus
ENSCING00000023561	-	78	33.750	ENSDARG00000109961	mrpl22	76	33.750	Danio_rerio
ENSCING00000023561	-	79	38.889	ENSDNOG00000012823	MRPL22	76	38.889	Dasypus_novemcinctus
ENSCING00000023561	-	83	31.638	FBgn0030786	mRpL22	74	31.638	Drosophila_melanogaster
ENSCING00000023561	-	62	39.062	ENSETEG00000008723	MRPL22	65	39.041	Echinops_telfairi
ENSCING00000023561	-	85	37.288	ENSEBUG00000015942	mrpl22	89	37.288	Eptatretus_burgeri
ENSCING00000023561	-	77	39.241	ENSEASG00005001016	MRPL22	76	39.241	Equus_asinus_asinus
ENSCING00000023561	-	77	39.873	ENSECAG00000018172	MRPL22	76	39.873	Equus_caballus
ENSCING00000023561	-	62	36.719	ENSEEUG00000009272	MRPL22	70	38.571	Erinaceus_europaeus
ENSCING00000023561	-	80	34.146	ENSELUG00000001259	mrpl22	83	34.146	Esox_lucius
ENSCING00000023561	-	77	38.608	ENSFCAG00000036527	MRPL22	75	38.608	Felis_catus
ENSCING00000023561	-	77	39.241	ENSFALG00000008367	MRPL22	74	39.241	Ficedula_albicollis
ENSCING00000023561	-	77	38.608	ENSFDAG00000007547	MRPL22	75	38.608	Fukomys_damarensis
ENSCING00000023561	-	82	36.905	ENSFHEG00000016348	mrpl22	80	36.905	Fundulus_heteroclitus
ENSCING00000023561	-	80	35.976	ENSGMOG00000013690	mrpl22	89	35.976	Gadus_morhua
ENSCING00000023561	-	85	36.364	ENSGALG00000003919	MRPL22	85	36.364	Gallus_gallus
ENSCING00000023561	-	79	37.037	ENSGAFG00000011440	mrpl22	77	37.037	Gambusia_affinis
ENSCING00000023561	-	82	37.059	ENSGACG00000020826	mrpl22	80	37.059	Gasterosteus_aculeatus
ENSCING00000023561	-	79	38.272	ENSGGOG00000042383	MRPL22	79	38.272	Gorilla_gorilla
ENSCING00000023561	-	82	36.310	ENSHBUG00000000840	mrpl22	81	36.310	Haplochromis_burtoni
ENSCING00000023561	-	77	37.342	ENSHGLG00000018496	MRPL22	77	37.342	Heterocephalus_glaber_female
ENSCING00000023561	-	77	37.342	ENSHGLG00100014119	MRPL22	75	37.342	Heterocephalus_glaber_male
ENSCING00000023561	-	82	35.119	ENSHCOG00000019038	mrpl22	80	35.119	Hippocampus_comes
ENSCING00000023561	-	79	36.420	ENSIPUG00000006432	mrpl22	78	36.420	Ictalurus_punctatus
ENSCING00000023561	-	77	38.608	ENSSTOG00000005822	MRPL22	81	38.608	Ictidomys_tridecemlineatus
ENSCING00000023561	-	77	37.342	ENSJJAG00000019238	Mrpl22	84	37.342	Jaculus_jaculus
ENSCING00000023561	-	81	36.747	ENSKMAG00000003611	mrpl22	79	36.747	Kryptolebias_marmoratus
ENSCING00000023561	-	82	33.929	ENSLBEG00000009644	mrpl22	82	33.929	Labrus_bergylta
ENSCING00000023561	-	79	37.037	ENSLACG00000003356	MRPL22	81	37.037	Latimeria_chalumnae
ENSCING00000023561	-	72	33.784	ENSLOCG00000012398	mrpl22	71	33.784	Lepisosteus_oculatus
ENSCING00000023561	-	79	37.654	ENSLAFG00000009866	MRPL22	90	37.654	Loxodonta_africana
ENSCING00000023561	-	77	38.608	ENSMFAG00000001423	MRPL22	77	38.608	Macaca_fascicularis
ENSCING00000023561	-	77	39.241	ENSMMUG00000021229	MRPL22	77	39.241	Macaca_mulatta
ENSCING00000023561	-	77	38.608	ENSMNEG00000029769	MRPL22	77	38.608	Macaca_nemestrina
ENSCING00000023561	-	77	38.608	ENSMLEG00000041525	MRPL22	77	38.608	Mandrillus_leucophaeus
ENSCING00000023561	-	80	36.364	ENSMAMG00000021842	mrpl22	84	36.364	Mastacembelus_armatus
ENSCING00000023561	-	82	36.310	ENSMZEG00005011987	mrpl22	81	36.310	Maylandia_zebra
ENSCING00000023561	-	83	37.791	ENSMGAG00000005605	MRPL22	82	37.791	Meleagris_gallopavo
ENSCING00000023561	-	64	34.848	ENSMAUG00000021980	Mrpl22	97	34.848	Mesocricetus_auratus
ENSCING00000023561	-	79	39.506	ENSMICG00000029267	MRPL22	76	39.506	Microcebus_murinus
ENSCING00000023561	-	97	33.500	ENSMOCG00000021016	Mrpl22	97	33.500	Microtus_ochrogaster
ENSCING00000023561	-	82	35.119	ENSMMOG00000013411	mrpl22	84	35.119	Mola_mola
ENSCING00000023561	-	79	37.037	ENSMODG00000008561	MRPL22	76	37.037	Monodelphis_domestica
ENSCING00000023561	-	79	37.654	ENSMALG00000019455	mrpl22	81	37.654	Monopterus_albus
ENSCING00000023561	-	77	38.608	MGP_CAROLIEiJ_G0016386	Mrpl22	87	36.111	Mus_caroli
ENSCING00000023561	-	77	38.608	ENSMUSG00000020514	Mrpl22	87	36.111	Mus_musculus
ENSCING00000023561	-	87	32.222	MGP_PahariEiJ_G0017521	Mrpl22	86	32.222	Mus_pahari
ENSCING00000023561	-	87	37.017	MGP_SPRETEiJ_G0017228	Mrpl22	87	37.017	Mus_spretus
ENSCING00000023561	-	77	39.241	ENSMPUG00000013533	MRPL22	75	39.241	Mustela_putorius_furo
ENSCING00000023561	-	77	38.608	ENSMLUG00000016853	MRPL22	76	38.608	Myotis_lucifugus
ENSCING00000023561	-	86	33.146	ENSNGAG00000000923	Mrpl22	92	34.463	Nannospalax_galili
ENSCING00000023561	-	82	36.310	ENSNBRG00000015114	mrpl22	80	36.310	Neolamprologus_brichardi
ENSCING00000023561	-	77	38.608	ENSNLEG00000029916	MRPL22	79	38.272	Nomascus_leucogenys
ENSCING00000023561	-	79	38.889	ENSOPRG00000013118	MRPL22	79	38.889	Ochotona_princeps
ENSCING00000023561	-	82	36.310	ENSONIG00000016439	mrpl22	81	36.310	Oreochromis_niloticus
ENSCING00000023561	-	79	37.037	ENSOANG00000005091	MRPL22	83	37.037	Ornithorhynchus_anatinus
ENSCING00000023561	-	77	40.506	ENSOCUG00000011189	MRPL22	70	40.506	Oryctolagus_cuniculus
ENSCING00000023561	-	80	35.366	ENSORLG00000022618	mrpl22	79	35.366	Oryzias_latipes
ENSCING00000023561	-	78	35.625	ENSORLG00020007188	mrpl22	68	35.625	Oryzias_latipes_hni
ENSCING00000023561	-	80	35.366	ENSORLG00015000806	mrpl22	79	35.366	Oryzias_latipes_hsok
ENSCING00000023561	-	56	36.522	ENSOMEG00000023447	-	74	36.522	Oryzias_melastigma
ENSCING00000023561	-	80	34.756	ENSOMEG00000023099	mrpl22	80	33.929	Oryzias_melastigma
ENSCING00000023561	-	92	35.025	ENSOGAG00000016777	MRPL22	97	35.025	Otolemur_garnettii
ENSCING00000023561	-	79	40.491	ENSOARG00000010435	MRPL22	81	40.491	Ovis_aries
ENSCING00000023561	-	79	38.272	ENSPPAG00000027082	MRPL22	79	38.272	Pan_paniscus
ENSCING00000023561	-	77	38.608	ENSPPRG00000004926	MRPL22	75	38.608	Panthera_pardus
ENSCING00000023561	-	77	38.608	ENSPTIG00000014937	MRPL22	75	38.608	Panthera_tigris_altaica
ENSCING00000023561	-	79	38.272	ENSPTRG00000051589	MRPL22	79	38.272	Pan_troglodytes
ENSCING00000023561	-	77	39.241	ENSPANG00000007037	MRPL22	77	39.241	Papio_anubis
ENSCING00000023561	-	82	35.714	ENSPKIG00000009864	mrpl22	81	35.714	Paramormyrops_kingsleyae
ENSCING00000023561	-	83	37.791	ENSPSIG00000003917	MRPL22	94	37.500	Pelodiscus_sinensis
ENSCING00000023561	-	79	37.037	ENSPMGG00000024128	mrpl22	74	37.037	Periophthalmus_magnuspinnatus
ENSCING00000023561	-	96	33.668	ENSPEMG00000021188	Mrpl22	97	33.668	Peromyscus_maniculatus_bairdii
ENSCING00000023561	-	73	36.000	ENSPMAG00000004569	-	67	36.000	Petromyzon_marinus
ENSCING00000023561	-	79	37.423	ENSPCIG00000019225	MRPL22	77	37.423	Phascolarctos_cinereus
ENSCING00000023561	-	82	37.500	ENSPFOG00000011072	mrpl22	82	37.500	Poecilia_formosa
ENSCING00000023561	-	82	37.500	ENSPLAG00000019524	mrpl22	89	37.500	Poecilia_latipinna
ENSCING00000023561	-	82	37.500	ENSPLAG00000018181	MRPL22	89	37.500	Poecilia_latipinna
ENSCING00000023561	-	82	37.500	ENSPMEG00000003477	mrpl22	80	37.500	Poecilia_mexicana
ENSCING00000023561	-	82	36.905	ENSPREG00000013247	mrpl22	80	36.905	Poecilia_reticulata
ENSCING00000023561	-	77	37.975	ENSPPYG00000015979	MRPL22	75	37.975	Pongo_abelii
ENSCING00000023561	-	77	39.241	ENSPCOG00000014557	-	90	41.667	Propithecus_coquereli
ENSCING00000023561	-	77	39.241	ENSPCOG00000017467	-	75	39.241	Propithecus_coquereli
ENSCING00000023561	-	77	38.608	ENSPVAG00000002266	MRPL22	77	38.608	Pteropus_vampyrus
ENSCING00000023561	-	56	39.130	ENSPNYG00000013370	mrpl22	70	39.130	Pundamilia_nyererei
ENSCING00000023561	-	81	33.133	ENSPNAG00000016347	mrpl22	80	33.133	Pygocentrus_nattereri
ENSCING00000023561	-	87	36.464	ENSRNOG00000027039	Mrpl22	81	36.464	Rattus_norvegicus
ENSCING00000023561	-	77	38.608	ENSRBIG00000028736	MRPL22	77	38.608	Rhinopithecus_bieti
ENSCING00000023561	-	77	38.608	ENSRROG00000018436	MRPL22	77	38.608	Rhinopithecus_roxellana
ENSCING00000023561	-	77	38.608	ENSSBOG00000025661	MRPL22	79	38.272	Saimiri_boliviensis_boliviensis
ENSCING00000023561	-	81	34.940	ENSSFOG00015010743	mrpl22	79	34.940	Scleropages_formosus
ENSCING00000023561	-	79	30.811	ENSSMAG00000010168	mrpl22	81	30.811	Scophthalmus_maximus
ENSCING00000023561	-	82	35.294	ENSSDUG00000004500	mrpl22	81	35.294	Seriola_dumerili
ENSCING00000023561	-	82	34.706	ENSSLDG00000010893	mrpl22	81	34.706	Seriola_lalandi_dorsalis
ENSCING00000023561	-	79	35.802	ENSSPUG00000011965	MRPL22	77	35.802	Sphenodon_punctatus
ENSCING00000023561	-	82	34.706	ENSSPAG00000007693	mrpl22	83	34.706	Stegastes_partitus
ENSCING00000023561	-	79	38.889	ENSSSCG00000017065	MRPL22	77	38.889	Sus_scrofa
ENSCING00000023561	-	85	36.364	ENSTGUG00000000684	MRPL22	95	36.364	Taeniopygia_guttata
ENSCING00000023561	-	81	36.145	ENSTRUG00000019671	mrpl22	80	36.145	Takifugu_rubripes
ENSCING00000023561	-	80	33.537	ENSTNIG00000007624	mrpl22	80	33.537	Tetraodon_nigroviridis
ENSCING00000023561	-	64	32.824	ENSTBEG00000006861	MRPL22	63	33.566	Tupaia_belangeri
ENSCING00000023561	-	67	34.307	ENSTTRG00000015959	MRPL22	67	34.307	Tursiops_truncatus
ENSCING00000023561	-	67	38.686	ENSUAMG00000019225	MRPL22	97	38.686	Ursus_americanus
ENSCING00000023561	-	78	38.750	ENSUMAG00000002718	MRPL22	72	38.750	Ursus_maritimus
ENSCING00000023561	-	80	38.323	ENSVPAG00000001170	MRPL22	82	38.323	Vicugna_pacos
ENSCING00000023561	-	77	38.608	ENSVVUG00000004611	MRPL22	75	38.608	Vulpes_vulpes
ENSCING00000023561	-	79	35.802	ENSXETG00000019403	mrpl22	79	35.802	Xenopus_tropicalis
ENSCING00000023561	-	82	37.500	ENSXCOG00000018806	mrpl22	79	37.500	Xiphophorus_couchianus
ENSCING00000023561	-	82	37.500	ENSXMAG00000015564	mrpl22	83	37.500	Xiphophorus_maculatus