EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023719 (Gene tree)
Gene ID: 100169983
Gene Symbol: zf(c2h2)-82
Alias: Ci-ZF(C2H2)-82
Full Name: zinc finger protein ZF(C2H2)-82
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 708 bases
Position: chr6:2021235-2021942
Accession: 100169983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035205	zf-C2H2	PF00096.26	6.2e-28	1	5
ENSCINP00000035205	zf-C2H2	PF00096.26	6.2e-28	2	5
ENSCINP00000035205	zf-C2H2	PF00096.26	6.2e-28	3	5
ENSCINP00000035205	zf-C2H2	PF00096.26	6.2e-28	4	5
ENSCINP00000035205	zf-C2H2	PF00096.26	6.2e-28	5	5
ENSCINP00000035205	zf-met	PF12874.7	1.8e-12	1	2
ENSCINP00000035205	zf-met	PF12874.7	1.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000037035	-	708	-	ENSCINP00000035205	236 (aa)	XP_018667710	Q1RLE9

Gene Model

Click here to download ENSCING00000023719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023719	zf(c2h2)-82	90	33.846	ENSCING00000004359	zf(c2h2)-145	95	33.846	Ciona_intestinalis
ENSCING00000023719	zf(c2h2)-82	92	34.132	FBgn0285971	prg	51	34.132	Drosophila_melanogaster
ENSCING00000023719	zf(c2h2)-82	92	30.827	FBgn0051388	CG31388	52	30.827	Drosophila_melanogaster
ENSCING00000023719	zf(c2h2)-82	94	33.505	FBgn0030010	CG10959	52	33.333	Drosophila_melanogaster
ENSCING00000023719	zf(c2h2)-82	90	36.628	ENSFHEG00000000789	-	55	36.628	Fundulus_heteroclitus
ENSCING00000023719	zf(c2h2)-82	89	47.222	ENSHBUG00000004077	-	95	47.222	Haplochromis_burtoni
ENSCING00000023719	zf(c2h2)-82	99	36.842	ENSKMAG00000008319	-	73	36.842	Kryptolebias_marmoratus
ENSCING00000023719	zf(c2h2)-82	92	34.559	ENSPMGG00000015225	-	54	34.559	Periophthalmus_magnuspinnatus
ENSCING00000023719	zf(c2h2)-82	94	40.000	ENSPMEG00000014769	-	51	40.000	Poecilia_mexicana