EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023726 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 843 bases
Position: chr1:1106607-1107449
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030202	Ribosomal_L28	PF00830.19	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036698	-	792	-	ENSCINP00000030202	263 (aa)	-	H2XKM0

Gene Model

Click here to download ENSCING00000023726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023726	-	93	46.586	ENSG00000086504	MRPL28	99	47.534	Homo_sapiens
ENSCING00000023726	-	95	43.478	ENSAPOG00000016883	mrpl28	97	43.478	Acanthochromis_polyacanthus
ENSCING00000023726	-	100	44.030	ENSAMEG00000007031	MRPL28	100	44.030	Ailuropoda_melanoleuca
ENSCING00000023726	-	93	44.269	ENSACIG00000005641	mrpl28	97	44.269	Amphilophus_citrinellus
ENSCING00000023726	-	95	42.126	ENSAOCG00000024148	mrpl28	95	44.248	Amphiprion_ocellaris
ENSCING00000023726	-	95	41.897	ENSAPEG00000010705	mrpl28	97	41.897	Amphiprion_percula
ENSCING00000023726	-	92	44.400	ENSATEG00000013085	mrpl28	96	44.400	Anabas_testudineus
ENSCING00000023726	-	51	55.474	ENSAPLG00000006257	MRPL28	96	55.474	Anas_platyrhynchos
ENSCING00000023726	-	93	43.651	ENSACAG00000015301	MRPL28	95	43.651	Anolis_carolinensis
ENSCING00000023726	-	93	46.586	ENSANAG00000022423	MRPL28	93	46.586	Aotus_nancymaae
ENSCING00000023726	-	93	41.502	ENSACLG00000017376	mrpl28	97	41.502	Astatotilapia_calliptera
ENSCING00000023726	-	95	44.922	ENSAMXG00000001999	mrpl28	98	44.922	Astyanax_mexicanus
ENSCING00000023726	-	98	46.565	ENSBTAG00000016581	MRPL28	91	46.565	Bos_taurus
ENSCING00000023726	-	97	44.487	ENSCAFG00000019682	MRPL28	99	45.076	Canis_familiaris
ENSCING00000023726	-	97	45.247	ENSCAFG00020009225	MRPL28	99	45.247	Canis_lupus_dingo
ENSCING00000023726	-	98	45.420	ENSCHIG00000016968	MRPL28	98	45.420	Capra_hircus
ENSCING00000023726	-	91	46.058	ENSTSYG00000032509	MRPL28	88	48.848	Carlito_syrichta
ENSCING00000023726	-	59	54.717	ENSCAPG00000011681	MRPL28	97	54.717	Cavia_aperea
ENSCING00000023726	-	97	47.529	ENSCPOG00000007176	MRPL28	98	47.529	Cavia_porcellus
ENSCING00000023726	-	97	44.867	ENSCCAG00000030887	MRPL28	99	44.867	Cebus_capucinus
ENSCING00000023726	-	97	45.769	ENSCATG00000040016	MRPL28	97	45.769	Cercocebus_atys
ENSCING00000023726	-	97	47.909	ENSCLAG00000014858	MRPL28	98	47.909	Chinchilla_lanigera
ENSCING00000023726	-	97	46.212	ENSCSAG00000012838	MRPL28	99	46.212	Chlorocebus_sabaeus
ENSCING00000023726	-	97	44.828	ENSCPBG00000026390	MRPL28	99	44.828	Chrysemys_picta_bellii
ENSCING00000023726	-	94	66.541	ENSCSAVG00000003761	-	95	66.541	Ciona_savignyi
ENSCING00000023726	-	97	44.867	ENSCANG00000033941	MRPL28	99	44.867	Colobus_angolensis_palliatus
ENSCING00000023726	-	98	45.802	ENSCGRG00001012825	Mrpl28	97	45.802	Cricetulus_griseus_chok1gshd
ENSCING00000023726	-	98	45.802	ENSCGRG00000014549	Mrpl28	97	45.802	Cricetulus_griseus_crigri
ENSCING00000023726	-	96	45.385	ENSCSEG00000008095	mrpl28	99	45.385	Cynoglossus_semilaevis
ENSCING00000023726	-	95	43.874	ENSCVAG00000005123	mrpl28	97	43.874	Cyprinodon_variegatus
ENSCING00000023726	-	93	44.130	ENSDARG00000057805	mrpl28	95	44.130	Danio_rerio
ENSCING00000023726	-	62	51.829	ENSDORG00000024147	Mrpl28	100	51.829	Dipodomys_ordii
ENSCING00000023726	-	92	45.267	ENSEBUG00000004106	mrpl28	94	45.267	Eptatretus_burgeri
ENSCING00000023726	-	97	45.594	ENSEASG00005018175	MRPL28	97	45.594	Equus_asinus_asinus
ENSCING00000023726	-	97	45.211	ENSECAG00000022663	MRPL28	97	45.211	Equus_caballus
ENSCING00000023726	-	97	44.444	ENSEEUG00000006626	MRPL28	90	44.444	Erinaceus_europaeus
ENSCING00000023726	-	94	45.238	ENSELUG00000014104	mrpl28	96	45.238	Esox_lucius
ENSCING00000023726	-	97	47.148	ENSFCAG00000041050	MRPL28	99	47.148	Felis_catus
ENSCING00000023726	-	57	50.658	ENSFALG00000004103	MRPL28	98	50.658	Ficedula_albicollis
ENSCING00000023726	-	96	45.769	ENSFDAG00000011002	MRPL28	97	45.769	Fukomys_damarensis
ENSCING00000023726	-	95	42.913	ENSFHEG00000006545	mrpl28	97	42.913	Fundulus_heteroclitus
ENSCING00000023726	-	96	42.471	ENSGMOG00000010597	mrpl28	97	42.471	Gadus_morhua
ENSCING00000023726	-	92	43.320	ENSGALG00000007473	MRPL28	94	43.320	Gallus_gallus
ENSCING00000023726	-	95	44.664	ENSGAFG00000012123	mrpl28	97	44.664	Gambusia_affinis
ENSCING00000023726	-	97	43.130	ENSGACG00000009641	mrpl28	99	43.130	Gasterosteus_aculeatus
ENSCING00000023726	-	92	45.161	ENSGAGG00000023391	MRPL28	94	45.161	Gopherus_agassizii
ENSCING00000023726	-	99	45.113	ENSGGOG00000006668	MRPL28	99	45.113	Gorilla_gorilla
ENSCING00000023726	-	83	43.805	ENSHBUG00000002357	mrpl28	94	43.805	Haplochromis_burtoni
ENSCING00000023726	-	97	46.768	ENSHGLG00000003807	MRPL28	98	46.768	Heterocephalus_glaber_female
ENSCING00000023726	-	97	46.768	ENSHGLG00100012704	MRPL28	98	46.768	Heterocephalus_glaber_male
ENSCING00000023726	-	96	43.846	ENSHCOG00000000219	mrpl28	99	43.846	Hippocampus_comes
ENSCING00000023726	-	94	44.048	ENSIPUG00000015984	mrpl28	96	44.048	Ictalurus_punctatus
ENSCING00000023726	-	100	46.642	ENSSTOG00000012316	MRPL28	98	46.642	Ictidomys_tridecemlineatus
ENSCING00000023726	-	98	46.565	ENSJJAG00000008947	Mrpl28	97	46.565	Jaculus_jaculus
ENSCING00000023726	-	95	45.059	ENSKMAG00000021277	mrpl28	97	45.059	Kryptolebias_marmoratus
ENSCING00000023726	-	88	41.841	ENSLBEG00000020499	mrpl28	90	41.841	Labrus_bergylta
ENSCING00000023726	-	93	37.786	ENSLACG00000009989	MRPL28	95	37.786	Latimeria_chalumnae
ENSCING00000023726	-	95	44.314	ENSLOCG00000014850	mrpl28	98	44.314	Lepisosteus_oculatus
ENSCING00000023726	-	97	46.008	ENSLAFG00000010776	MRPL28	100	46.008	Loxodonta_africana
ENSCING00000023726	-	97	46.008	ENSMFAG00000006698	MRPL28	99	46.008	Macaca_fascicularis
ENSCING00000023726	-	97	46.008	ENSMMUG00000000609	MRPL28	99	46.008	Macaca_mulatta
ENSCING00000023726	-	97	46.008	ENSMNEG00000027279	MRPL28	99	46.008	Macaca_nemestrina
ENSCING00000023726	-	97	46.008	ENSMLEG00000002439	MRPL28	99	46.008	Mandrillus_leucophaeus
ENSCING00000023726	-	96	44.015	ENSMAMG00000011487	mrpl28	99	44.015	Mastacembelus_armatus
ENSCING00000023726	-	93	41.502	ENSMZEG00005016524	mrpl28	97	41.502	Maylandia_zebra
ENSCING00000023726	-	98	45.038	ENSMAUG00000003487	Mrpl28	97	45.038	Mesocricetus_auratus
ENSCING00000023726	-	89	45.833	ENSMICG00000031344	MRPL28	100	43.657	Microcebus_murinus
ENSCING00000023726	-	100	45.896	ENSMOCG00000014836	Mrpl28	99	45.896	Microtus_ochrogaster
ENSCING00000023726	-	93	45.783	ENSMMOG00000012412	mrpl28	95	45.783	Mola_mola
ENSCING00000023726	-	97	44.867	ENSMODG00000016666	MRPL28	100	44.867	Monodelphis_domestica
ENSCING00000023726	-	94	46.614	ENSMALG00000011904	mrpl28	96	46.614	Monopterus_albus
ENSCING00000023726	-	97	46.743	MGP_CAROLIEiJ_G0021273	Mrpl28	97	46.743	Mus_caroli
ENSCING00000023726	-	97	46.743	ENSMUSG00000024181	Mrpl28	97	46.743	Mus_musculus
ENSCING00000023726	-	97	46.388	MGP_PahariEiJ_G0023591	Mrpl28	98	46.388	Mus_pahari
ENSCING00000023726	-	97	46.743	MGP_SPRETEiJ_G0022184	Mrpl28	97	46.743	Mus_spretus
ENSCING00000023726	-	99	44.569	ENSMPUG00000016020	MRPL28	99	44.569	Mustela_putorius_furo
ENSCING00000023726	-	100	45.896	ENSMLUG00000010009	MRPL28	100	45.896	Myotis_lucifugus
ENSCING00000023726	-	84	47.137	ENSNGAG00000016312	Mrpl28	94	47.137	Nannospalax_galili
ENSCING00000023726	-	93	41.897	ENSNBRG00000005544	mrpl28	97	41.897	Neolamprologus_brichardi
ENSCING00000023726	-	98	45.420	ENSNLEG00000031011	MRPL28	98	45.420	Nomascus_leucogenys
ENSCING00000023726	-	97	45.594	ENSMEUG00000000407	MRPL28	98	45.594	Notamacropus_eugenii
ENSCING00000023726	-	97	47.529	ENSODEG00000015538	MRPL28	98	47.529	Octodon_degus
ENSCING00000023726	-	93	43.083	ENSONIG00000005965	mrpl28	97	43.083	Oreochromis_niloticus
ENSCING00000023726	-	95	45.850	ENSORLG00000006806	mrpl28	97	45.850	Oryzias_latipes
ENSCING00000023726	-	95	45.850	ENSORLG00020002937	mrpl28	97	45.850	Oryzias_latipes_hni
ENSCING00000023726	-	95	45.455	ENSORLG00015005123	mrpl28	97	45.455	Oryzias_latipes_hsok
ENSCING00000023726	-	95	45.059	ENSOMEG00000013553	mrpl28	97	45.059	Oryzias_melastigma
ENSCING00000023726	-	90	47.737	ENSOGAG00000014941	MRPL28	96	47.244	Otolemur_garnettii
ENSCING00000023726	-	98	45.802	ENSOARG00000011786	MRPL28	98	45.802	Ovis_aries
ENSCING00000023726	-	90	46.502	ENSPPAG00000034473	MRPL28	99	45.113	Pan_paniscus
ENSCING00000023726	-	97	47.148	ENSPPRG00000002937	MRPL28	99	47.148	Panthera_pardus
ENSCING00000023726	-	97	47.148	ENSPTIG00000017626	MRPL28	99	47.148	Panthera_tigris_altaica
ENSCING00000023726	-	90	46.914	ENSPTRG00000047553	MRPL28	99	45.489	Pan_troglodytes
ENSCING00000023726	-	97	46.008	ENSPANG00000018773	MRPL28	99	46.008	Papio_anubis
ENSCING00000023726	-	96	44.615	ENSPKIG00000010370	mrpl28	99	44.615	Paramormyrops_kingsleyae
ENSCING00000023726	-	92	45.968	ENSPSIG00000011177	MRPL28	97	45.968	Pelodiscus_sinensis
ENSCING00000023726	-	94	45.020	ENSPMGG00000014190	mrpl28	96	45.020	Periophthalmus_magnuspinnatus
ENSCING00000023726	-	100	44.776	ENSPEMG00000019054	Mrpl28	99	44.776	Peromyscus_maniculatus_bairdii
ENSCING00000023726	-	94	45.418	ENSPMAG00000004202	mrpl28	95	45.418	Petromyzon_marinus
ENSCING00000023726	-	97	46.360	ENSPCIG00000000377	MRPL28	89	46.360	Phascolarctos_cinereus
ENSCING00000023726	-	95	45.059	ENSPFOG00000009485	mrpl28	97	45.059	Poecilia_formosa
ENSCING00000023726	-	95	44.664	ENSPLAG00000020059	mrpl28	97	44.664	Poecilia_latipinna
ENSCING00000023726	-	95	44.664	ENSPMEG00000012919	mrpl28	97	44.664	Poecilia_mexicana
ENSCING00000023726	-	95	45.059	ENSPREG00000022968	mrpl28	97	45.059	Poecilia_reticulata
ENSCING00000023726	-	84	47.577	ENSPPYG00000006906	MRPL28	99	47.577	Pongo_abelii
ENSCING00000023726	-	90	47.737	ENSPCAG00000011480	MRPL28	97	47.126	Procavia_capensis
ENSCING00000023726	-	90	46.058	ENSPCOG00000021895	MRPL28	99	44.867	Propithecus_coquereli
ENSCING00000023726	-	100	41.791	ENSPVAG00000000551	MRPL28	100	41.791	Pteropus_vampyrus
ENSCING00000023726	-	83	43.805	ENSPNYG00000005347	mrpl28	94	43.805	Pundamilia_nyererei
ENSCING00000023726	-	94	43.651	ENSPNAG00000009296	mrpl28	96	43.651	Pygocentrus_nattereri
ENSCING00000023726	-	98	46.067	ENSRNOG00000042720	Mrpl28	100	46.067	Rattus_norvegicus
ENSCING00000023726	-	99	44.737	ENSRBIG00000029953	MRPL28	99	44.737	Rhinopithecus_bieti
ENSCING00000023726	-	99	44.361	ENSRROG00000042756	MRPL28	99	44.361	Rhinopithecus_roxellana
ENSCING00000023726	-	96	45.560	ENSSBOG00000019789	MRPL28	99	45.560	Saimiri_boliviensis_boliviensis
ENSCING00000023726	-	97	46.008	ENSSHAG00000007606	MRPL28	100	46.008	Sarcophilus_harrisii
ENSCING00000023726	-	96	45.349	ENSSFOG00015006866	mrpl28	99	45.349	Scleropages_formosus
ENSCING00000023726	-	92	43.426	ENSSMAG00000013912	mrpl28	96	43.426	Scophthalmus_maximus
ENSCING00000023726	-	88	45.339	ENSSDUG00000005764	mrpl28	90	45.339	Seriola_dumerili
ENSCING00000023726	-	88	44.915	ENSSLDG00000000409	mrpl28	90	44.915	Seriola_lalandi_dorsalis
ENSCING00000023726	-	59	43.312	ENSSARG00000006277	-	99	43.312	Sorex_araneus
ENSCING00000023726	-	93	46.185	ENSSPUG00000015322	MRPL28	95	46.185	Sphenodon_punctatus
ENSCING00000023726	-	95	42.292	ENSSPAG00000011153	mrpl28	97	42.292	Stegastes_partitus
ENSCING00000023726	-	90	45.679	ENSSSCG00000007984	MRPL28	100	44.403	Sus_scrofa
ENSCING00000023726	-	94	44.622	ENSTRUG00000019877	mrpl28	96	44.622	Takifugu_rubripes
ENSCING00000023726	-	94	44.223	ENSTNIG00000007746	mrpl28	96	44.223	Tetraodon_nigroviridis
ENSCING00000023726	-	70	49.730	ENSTNIG00000002347	-	76	49.730	Tetraodon_nigroviridis
ENSCING00000023726	-	100	45.149	ENSUAMG00000015724	MRPL28	96	45.149	Ursus_americanus
ENSCING00000023726	-	100	45.149	ENSUMAG00000021029	MRPL28	100	45.149	Ursus_maritimus
ENSCING00000023726	-	60	47.191	ENSVVUG00000013414	MRPL28	63	47.191	Vulpes_vulpes
ENSCING00000023726	-	93	46.185	ENSXETG00000011564	mrpl28	94	46.185	Xenopus_tropicalis
ENSCING00000023726	-	94	44.223	ENSXCOG00000012655	mrpl28	96	44.223	Xiphophorus_couchianus
ENSCING00000023726	-	94	44.223	ENSXMAG00000004293	mrpl28	96	44.223	Xiphophorus_maculatus