EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023796 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2880 bases
Position: chr3:5071347-5074226
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018216	Aconitase	PF00330.20	8.4e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018216	-	1236	-	ENSCINP00000018216	347 (aa)	-	F6PL99

Gene Model

Click here to download ENSCING00000023796's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00020	Citrate cycle (TCA cycle)	KEGG
cin00630	Glyoxylate and dicarboxylate metabolism	KEGG
cin01100	Metabolic pathways	KEGG
cin01200	Carbon metabolism	KEGG
cin01210	2-Oxocarboxylic acid metabolism	KEGG
cin01230	Biosynthesis of amino acids	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023796	-	79	70.182	ENSACAG00000013398	-	100	70.182	Anolis_carolinensis
ENSCING00000023796	-	95	71.646	ENSEBUG00000009201	aco2	55	71.646	Eptatretus_burgeri
ENSCING00000023796	-	97	71.045	ENSJJAG00000014029	Aco2	51	71.045	Jaculus_jaculus
ENSCING00000023796	-	95	75.684	ENSKMAG00000021995	aco2	68	75.684	Kryptolebias_marmoratus
ENSCING00000023796	-	99	75.072	ENSMUSG00000022477	Aco2	96	83.422	Mus_musculus
ENSCING00000023796	-	99	70.811	ENSRBIG00000035174	ACO2	51	70.811	Rhinopithecus_bieti
ENSCING00000023796	-	99	74.203	ENSSBOG00000021699	-	54	74.203	Saimiri_boliviensis_boliviensis