EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023871 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 591 bases
Position: chr14:2428869-2429459
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032214	UPF0086	PF01868.16	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033820	-	591	-	ENSCINP00000032214	197 (aa)	-	H2XRD0

Gene Model

Click here to download ENSCING00000023871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023871	-	96	32.000	ENSG00000105171	POP4	93	40.449	Homo_sapiens
ENSCING00000023871	-	94	32.984	ENSAMEG00000018329	-	84	32.984	Ailuropoda_melanoleuca
ENSCING00000023871	-	94	32.474	ENSAMEG00000003172	-	84	32.292	Ailuropoda_melanoleuca
ENSCING00000023871	-	95	31.282	ENSACIG00000008358	pop4	58	35.772	Amphilophus_citrinellus
ENSCING00000023871	-	96	31.122	ENSAOCG00000010116	pop4	59	37.398	Amphiprion_ocellaris
ENSCING00000023871	-	96	31.633	ENSAPEG00000002829	pop4	51	38.211	Amphiprion_percula
ENSCING00000023871	-	95	32.990	ENSATEG00000013028	pop4	86	32.990	Anabas_testudineus
ENSCING00000023871	-	62	37.398	ENSAPLG00000014051	POP4	59	37.398	Anas_platyrhynchos
ENSCING00000023871	-	94	32.984	ENSANAG00000020295	POP4	84	34.555	Aotus_nancymaae
ENSCING00000023871	-	95	30.412	ENSACLG00000000526	pop4	55	34.959	Astatotilapia_calliptera
ENSCING00000023871	-	93	30.526	ENSAMXG00000002899	pop4	84	32.632	Astyanax_mexicanus
ENSCING00000023871	-	94	32.461	ENSBTAG00000002223	POP4	84	32.984	Bos_taurus
ENSCING00000023871	-	94	33.333	ENSCJAG00000046750	POP4	84	34.031	Callithrix_jacchus
ENSCING00000023871	-	63	37.097	ENSCAFG00000007630	POP4	68	37.097	Canis_familiaris
ENSCING00000023871	-	94	32.984	ENSCHIG00000016743	POP4	84	33.508	Capra_hircus
ENSCING00000023871	-	94	31.414	ENSTSYG00000003488	POP4	84	34.031	Carlito_syrichta
ENSCING00000023871	-	98	33.166	ENSCPOG00000002992	POP4	88	33.166	Cavia_porcellus
ENSCING00000023871	-	63	34.677	ENSCCAG00000034244	-	55	34.677	Cebus_capucinus
ENSCING00000023871	-	94	32.461	ENSCCAG00000020285	-	84	34.031	Cebus_capucinus
ENSCING00000023871	-	94	32.461	ENSCATG00000036022	POP4	93	40.449	Cercocebus_atys
ENSCING00000023871	-	94	31.250	ENSCLAG00000013162	POP4	85	32.812	Chinchilla_lanigera
ENSCING00000023871	-	94	31.937	ENSCSAG00000004868	POP4	85	34.031	Chlorocebus_sabaeus
ENSCING00000023871	-	94	30.570	ENSCPBG00000016132	POP4	84	31.414	Chrysemys_picta_bellii
ENSCING00000023871	-	94	31.937	ENSCANG00000005924	POP4	92	34.031	Colobus_angolensis_palliatus
ENSCING00000023871	-	94	32.632	ENSCGRG00001017185	Pop4	84	34.043	Cricetulus_griseus_chok1gshd
ENSCING00000023871	-	94	32.632	ENSCGRG00000008155	Pop4	84	34.043	Cricetulus_griseus_crigri
ENSCING00000023871	-	88	33.143	ENSCSEG00000002946	pop4	55	36.585	Cynoglossus_semilaevis
ENSCING00000023871	-	94	30.208	ENSDARG00000101472	pop4	84	31.414	Danio_rerio
ENSCING00000023871	-	94	31.937	ENSDNOG00000047663	POP4	74	33.508	Dasypus_novemcinctus
ENSCING00000023871	-	75	30.719	ENSDORG00000008577	Pop4	85	31.373	Dipodomys_ordii
ENSCING00000023871	-	94	31.373	ENSEBUG00000010447	pop4	77	30.732	Eptatretus_burgeri
ENSCING00000023871	-	94	30.481	ENSEBUG00000008575	pop4	84	30.481	Eptatretus_burgeri
ENSCING00000023871	-	93	33.862	ENSELUG00000019812	pop4	84	32.258	Esox_lucius
ENSCING00000023871	-	94	33.508	ENSFCAG00000001619	POP4	84	33.508	Felis_catus
ENSCING00000023871	-	95	30.729	ENSFALG00000000206	POP4	84	31.443	Ficedula_albicollis
ENSCING00000023871	-	94	34.375	ENSFDAG00000017859	POP4	85	34.375	Fukomys_damarensis
ENSCING00000023871	-	80	30.488	ENSFHEG00000012745	pop4	55	33.333	Fundulus_heteroclitus
ENSCING00000023871	-	72	34.752	ENSGALG00000041972	POP4	51	36.585	Gallus_gallus
ENSCING00000023871	-	62	33.333	ENSGACG00000014510	pop4	66	33.333	Gasterosteus_aculeatus
ENSCING00000023871	-	94	30.890	ENSGAGG00000024544	POP4	67	30.890	Gopherus_agassizii
ENSCING00000023871	-	94	32.461	ENSGGOG00000038346	POP4	84	34.031	Gorilla_gorilla
ENSCING00000023871	-	95	30.412	ENSHBUG00000021821	pop4	55	34.959	Haplochromis_burtoni
ENSCING00000023871	-	94	34.375	ENSHGLG00000015798	POP4	85	34.375	Heterocephalus_glaber_female
ENSCING00000023871	-	94	34.375	ENSHGLG00100009737	POP4	85	34.375	Heterocephalus_glaber_male
ENSCING00000023871	-	95	33.503	ENSHCOG00000020937	pop4	85	33.503	Hippocampus_comes
ENSCING00000023871	-	94	32.461	ENSIPUG00000013652	pop4	84	31.937	Ictalurus_punctatus
ENSCING00000023871	-	97	31.980	ENSSTOG00000011016	POP4	87	33.503	Ictidomys_tridecemlineatus
ENSCING00000023871	-	94	32.461	ENSJJAG00000013376	Pop4	84	35.079	Jaculus_jaculus
ENSCING00000023871	-	95	32.474	ENSKMAG00000012250	pop4	85	32.474	Kryptolebias_marmoratus
ENSCING00000023871	-	62	36.585	ENSLBEG00000014139	pop4	55	36.585	Labrus_bergylta
ENSCING00000023871	-	62	36.585	ENSLBEG00000018846	-	55	36.585	Labrus_bergylta
ENSCING00000023871	-	62	36.585	ENSLACG00000008581	POP4	55	36.585	Latimeria_chalumnae
ENSCING00000023871	-	94	32.461	ENSLOCG00000005597	pop4	84	32.461	Lepisosteus_oculatus
ENSCING00000023871	-	94	34.031	ENSLAFG00000000084	POP4	84	35.602	Loxodonta_africana
ENSCING00000023871	-	94	31.937	ENSMFAG00000029606	POP4	84	34.031	Macaca_fascicularis
ENSCING00000023871	-	94	32.984	ENSMMUG00000017424	POP4	84	32.984	Macaca_mulatta
ENSCING00000023871	-	94	33.508	ENSMNEG00000031374	POP4	84	33.508	Macaca_nemestrina
ENSCING00000023871	-	94	32.984	ENSMLEG00000043454	POP4	84	32.984	Mandrillus_leucophaeus
ENSCING00000023871	-	81	33.735	ENSMAMG00000011716	pop4	85	31.959	Mastacembelus_armatus
ENSCING00000023871	-	95	30.412	ENSMZEG00005002360	pop4	55	34.959	Maylandia_zebra
ENSCING00000023871	-	72	35.461	ENSMGAG00000005337	POP4	54	37.398	Meleagris_gallopavo
ENSCING00000023871	-	94	30.890	ENSMAUG00000020110	Pop4	84	34.555	Mesocricetus_auratus
ENSCING00000023871	-	94	32.461	ENSMICG00000035730	POP4	83	32.461	Microcebus_murinus
ENSCING00000023871	-	59	36.207	ENSMMOG00000015321	pop4	52	36.842	Mola_mola
ENSCING00000023871	-	95	30.653	ENSMODG00000029406	POP4	81	32.474	Monodelphis_domestica
ENSCING00000023871	-	66	35.766	ENSMALG00000012571	pop4	62	35.766	Monopterus_albus
ENSCING00000023871	-	94	32.487	MGP_CAROLIEiJ_G0029600	Pop4	84	32.461	Mus_caroli
ENSCING00000023871	-	94	32.984	ENSMUSG00000030423	Pop4	84	31.937	Mus_musculus
ENSCING00000023871	-	94	31.795	MGP_SPRETEiJ_G0030699	Pop4	84	33.508	Mus_spretus
ENSCING00000023871	-	94	32.984	ENSMPUG00000008041	-	84	32.984	Mustela_putorius_furo
ENSCING00000023871	-	94	30.052	ENSMPUG00000008063	-	84	31.383	Mustela_putorius_furo
ENSCING00000023871	-	94	34.031	ENSOPRG00000004736	POP4	93	34.031	Ochotona_princeps
ENSCING00000023871	-	94	33.333	ENSODEG00000013025	POP4	88	33.333	Octodon_degus
ENSCING00000023871	-	95	31.795	ENSONIG00000003458	pop4	54	35.772	Oreochromis_niloticus
ENSCING00000023871	-	94	32.461	ENSOCUG00000015974	POP4	84	34.031	Oryctolagus_cuniculus
ENSCING00000023871	-	95	30.928	ENSORLG00000020317	pop4	55	35.772	Oryzias_latipes
ENSCING00000023871	-	95	30.928	ENSORLG00015011624	pop4	55	35.772	Oryzias_latipes_hsok
ENSCING00000023871	-	96	30.102	ENSOMEG00000002538	pop4	55	36.585	Oryzias_melastigma
ENSCING00000023871	-	97	30.542	ENSOGAG00000011168	POP4	87	32.323	Otolemur_garnettii
ENSCING00000023871	-	94	32.984	ENSOARG00000004041	POP4	84	33.508	Ovis_aries
ENSCING00000023871	-	96	32.000	ENSPPAG00000040372	POP4	88	33.500	Pan_paniscus
ENSCING00000023871	-	94	33.508	ENSPPRG00000010502	POP4	84	33.508	Panthera_pardus
ENSCING00000023871	-	94	33.508	ENSPTIG00000016598	POP4	84	33.508	Panthera_tigris_altaica
ENSCING00000023871	-	96	32.000	ENSPTRG00000010779	POP4	88	33.500	Pan_troglodytes
ENSCING00000023871	-	94	31.937	ENSPANG00000008546	POP4	84	34.031	Papio_anubis
ENSCING00000023871	-	96	33.000	ENSPSIG00000015690	POP4	96	31.000	Pelodiscus_sinensis
ENSCING00000023871	-	72	36.111	ENSPMGG00000008608	pop4	57	37.500	Periophthalmus_magnuspinnatus
ENSCING00000023871	-	97	30.392	ENSPEMG00000014034	-	89	32.828	Peromyscus_maniculatus_bairdii
ENSCING00000023871	-	62	40.310	ENSPMAG00000006265	pop4	62	40.310	Petromyzon_marinus
ENSCING00000023871	-	94	34.031	ENSPCIG00000024738	POP4	80	34.031	Phascolarctos_cinereus
ENSCING00000023871	-	96	30.412	ENSPFOG00000000925	pop4	55	36.066	Poecilia_formosa
ENSCING00000023871	-	96	30.412	ENSPLAG00000003161	pop4	55	36.066	Poecilia_latipinna
ENSCING00000023871	-	96	30.412	ENSPMEG00000002475	pop4	55	36.066	Poecilia_mexicana
ENSCING00000023871	-	62	37.398	ENSPREG00000022403	pop4	53	37.398	Poecilia_reticulata
ENSCING00000023871	-	96	32.000	ENSPPYG00000009805	POP4	88	33.500	Pongo_abelii
ENSCING00000023871	-	96	32.000	ENSPCAG00000007737	POP4	88	32.000	Procavia_capensis
ENSCING00000023871	-	94	32.461	ENSPCOG00000018055	POP4	84	34.031	Propithecus_coquereli
ENSCING00000023871	-	94	34.031	ENSPVAG00000006069	POP4	84	34.031	Pteropus_vampyrus
ENSCING00000023871	-	95	30.928	ENSPNYG00000020038	pop4	55	34.959	Pundamilia_nyererei
ENSCING00000023871	-	93	31.579	ENSPNAG00000005591	pop4	84	32.105	Pygocentrus_nattereri
ENSCING00000023871	-	94	33.846	ENSRNOG00000027646	Pop4	84	33.508	Rattus_norvegicus
ENSCING00000023871	-	76	30.323	ENSRBIG00000044769	POP4	79	32.278	Rhinopithecus_bieti
ENSCING00000023871	-	94	31.937	ENSRROG00000028903	POP4	84	34.031	Rhinopithecus_roxellana
ENSCING00000023871	-	94	34.031	ENSSBOG00000032445	POP4	84	34.031	Saimiri_boliviensis_boliviensis
ENSCING00000023871	-	97	33.333	ENSSHAG00000016888	POP4	87	32.323	Sarcophilus_harrisii
ENSCING00000023871	-	95	33.505	ENSSFOG00015014556	pop4	84	32.984	Scleropages_formosus
ENSCING00000023871	-	94	30.366	ENSSMAG00000016611	pop4	57	36.585	Scophthalmus_maximus
ENSCING00000023871	-	95	31.443	ENSSDUG00000019865	pop4	76	31.443	Seriola_dumerili
ENSCING00000023871	-	95	34.000	ENSSLDG00000001763	pop4	82	31.959	Seriola_lalandi_dorsalis
ENSCING00000023871	-	94	30.102	ENSSARG00000004748	POP4	85	32.461	Sorex_araneus
ENSCING00000023871	-	95	31.959	ENSSPAG00000014364	pop4	85	31.959	Stegastes_partitus
ENSCING00000023871	-	94	33.508	ENSSSCG00000002854	POP4	84	33.508	Sus_scrofa
ENSCING00000023871	-	94	31.414	ENSTGUG00000008953	POP4	93	31.414	Taeniopygia_guttata
ENSCING00000023871	-	62	36.585	ENSTNIG00000006401	pop4	60	36.585	Tetraodon_nigroviridis
ENSCING00000023871	-	94	34.555	ENSTBEG00000002194	POP4	84	34.555	Tupaia_belangeri
ENSCING00000023871	-	94	30.890	ENSTTRG00000005882	POP4	84	32.984	Tursiops_truncatus
ENSCING00000023871	-	94	33.508	ENSUAMG00000003049	-	84	33.508	Ursus_americanus
ENSCING00000023871	-	94	33.508	ENSUMAG00000007522	-	84	33.508	Ursus_maritimus
ENSCING00000023871	-	94	33.508	ENSVVUG00000016876	-	65	33.508	Vulpes_vulpes
ENSCING00000023871	-	98	31.156	ENSXETG00000017598	pop4	88	31.472	Xenopus_tropicalis
ENSCING00000023871	-	62	36.585	ENSXCOG00000017695	pop4	52	36.585	Xiphophorus_couchianus
ENSCING00000023871	-	62	36.585	ENSXMAG00000013862	pop4	52	36.585	Xiphophorus_maculatus