EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023888 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1412 bases
Position: chr11:4072544-4073955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034919	Methyltr_RsmB-F	PF01189.17	2.9e-34	1	1
ENSCINP00000034919	Methyltransf_31	PF13847.6	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000035718	-	1269	-	ENSCINP00000034919	423 (aa)	-	H2XZ35

Gene Model

Click here to download ENSCING00000023888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023888	-	95	43.932	ENSG00000130305	NSUN5	98	44.104	Homo_sapiens
ENSCING00000023888	-	97	44.893	ENSAPOG00000016848	nsun5	96	44.893	Acanthochromis_polyacanthus
ENSCING00000023888	-	97	43.192	ENSAMEG00000011119	NSUN5	91	43.192	Ailuropoda_melanoleuca
ENSCING00000023888	-	97	46.318	ENSACIG00000001153	nsun5	85	46.318	Amphilophus_citrinellus
ENSCING00000023888	-	97	44.656	ENSAOCG00000019331	nsun5	83	44.656	Amphiprion_ocellaris
ENSCING00000023888	-	97	44.656	ENSAPEG00000013003	nsun5	83	44.656	Amphiprion_percula
ENSCING00000023888	-	97	45.755	ENSATEG00000010576	nsun5	83	45.755	Anabas_testudineus
ENSCING00000023888	-	57	50.826	ENSAPLG00000008049	NSUN5	84	50.826	Anas_platyrhynchos
ENSCING00000023888	-	98	42.991	ENSACAG00000000193	NSUN5	93	43.224	Anolis_carolinensis
ENSCING00000023888	-	95	44.231	ENSANAG00000029059	NSUN5	91	44.159	Aotus_nancymaae
ENSCING00000023888	-	99	45.349	ENSACLG00000021086	nsun5	85	45.349	Astatotilapia_calliptera
ENSCING00000023888	-	98	43.198	ENSAMXG00000016626	nsun5	91	43.198	Astyanax_mexicanus
ENSCING00000023888	-	97	44.941	ENSBTAG00000017941	NSUN5	91	45.176	Bos_taurus
ENSCING00000023888	-	97	37.788	WBGene00013151	nsun-5	98	43.706	Caenorhabditis_elegans
ENSCING00000023888	-	95	44.417	ENSCJAG00000016968	NSUN5	91	44.340	Callithrix_jacchus
ENSCING00000023888	-	97	44.601	ENSCAFG00000013197	NSUN5	90	44.366	Canis_familiaris
ENSCING00000023888	-	97	44.601	ENSCAFG00020012547	NSUN5	90	44.366	Canis_lupus_dingo
ENSCING00000023888	-	97	44.366	ENSCHIG00000012082	NSUN5	91	44.601	Capra_hircus
ENSCING00000023888	-	92	44.307	ENSTSYG00000036549	NSUN5	90	44.307	Carlito_syrichta
ENSCING00000023888	-	77	47.041	ENSCAPG00000013989	NSUN5	90	47.042	Cavia_aperea
ENSCING00000023888	-	95	46.024	ENSCPOG00000023149	NSUN5	92	46.009	Cavia_porcellus
ENSCING00000023888	-	95	44.794	ENSCCAG00000021042	NSUN5	91	44.706	Cebus_capucinus
ENSCING00000023888	-	97	44.104	ENSCATG00000015253	NSUN5	91	44.104	Cercocebus_atys
ENSCING00000023888	-	98	43.953	ENSCLAG00000005624	NSUN5	95	43.953	Chinchilla_lanigera
ENSCING00000023888	-	97	44.340	ENSCSAG00000018161	NSUN5	91	44.340	Chlorocebus_sabaeus
ENSCING00000023888	-	56	37.975	ENSCHOG00000013725	-	77	38.800	Choloepus_hoffmanni
ENSCING00000023888	-	86	42.895	ENSCPBG00000009699	NSUN5	88	42.895	Chrysemys_picta_bellii
ENSCING00000023888	-	97	63.171	ENSCSAVG00000006814	-	99	63.171	Ciona_savignyi
ENSCING00000023888	-	95	43.932	ENSCANG00000043217	NSUN5	91	44.104	Colobus_angolensis_palliatus
ENSCING00000023888	-	97	44.235	ENSCGRG00001006270	Nsun5	91	44.235	Cricetulus_griseus_chok1gshd
ENSCING00000023888	-	77	44.807	ENSCGRG00000006943	Nsun5	87	45.198	Cricetulus_griseus_crigri
ENSCING00000023888	-	99	45.747	ENSCSEG00000000376	nsun5	97	46.318	Cynoglossus_semilaevis
ENSCING00000023888	-	97	46.209	ENSCVAG00000001813	nsun5	83	46.209	Cyprinodon_variegatus
ENSCING00000023888	-	98	45.047	ENSDARG00000043209	nsun5	95	45.047	Danio_rerio
ENSCING00000023888	-	95	43.584	ENSDNOG00000000305	NSUN5	90	43.632	Dasypus_novemcinctus
ENSCING00000023888	-	97	43.529	ENSDORG00000010530	Nsun5	90	43.529	Dipodomys_ordii
ENSCING00000023888	-	97	30.000	FBgn0259704	Nsun5	96	30.000	Drosophila_melanogaster
ENSCING00000023888	-	84	43.514	ENSETEG00000000934	NSUN5	89	43.784	Echinops_telfairi
ENSCING00000023888	-	83	42.742	ENSEBUG00000006181	nsun5	84	42.742	Eptatretus_burgeri
ENSCING00000023888	-	95	42.961	ENSEASG00005016116	NSUN5	91	42.925	Equus_asinus_asinus
ENSCING00000023888	-	97	42.925	ENSECAG00000012138	NSUN5	91	42.925	Equus_caballus
ENSCING00000023888	-	95	40.580	ENSEEUG00000004861	NSUN5	93	40.610	Erinaceus_europaeus
ENSCING00000023888	-	100	45.035	ENSELUG00000013971	nsun5	79	45.035	Esox_lucius
ENSCING00000023888	-	97	43.427	ENSFCAG00000012667	NSUN5	90	43.662	Felis_catus
ENSCING00000023888	-	92	43.176	ENSFALG00000013697	NSUN5	89	43.176	Ficedula_albicollis
ENSCING00000023888	-	97	44.836	ENSFDAG00000009683	NSUN5	91	44.836	Fukomys_damarensis
ENSCING00000023888	-	97	45.131	ENSFHEG00000022931	nsun5	84	45.131	Fundulus_heteroclitus
ENSCING00000023888	-	97	45.843	ENSGMOG00000005869	nsun5	99	45.843	Gadus_morhua
ENSCING00000023888	-	97	44.471	ENSGALG00000000891	NSUN5	90	44.471	Gallus_gallus
ENSCING00000023888	-	97	44.153	ENSGAFG00000019082	nsun5	84	45.346	Gambusia_affinis
ENSCING00000023888	-	97	45.606	ENSGACG00000006042	nsun5	95	45.606	Gasterosteus_aculeatus
ENSCING00000023888	-	86	42.627	ENSGAGG00000017057	NSUN5	88	42.627	Gopherus_agassizii
ENSCING00000023888	-	95	43.689	ENSGGOG00000043878	-	91	43.868	Gorilla_gorilla
ENSCING00000023888	-	97	42.689	ENSGGOG00000011730	-	90	42.689	Gorilla_gorilla
ENSCING00000023888	-	97	45.368	ENSHBUG00000007202	nsun5	84	45.368	Haplochromis_burtoni
ENSCING00000023888	-	97	44.601	ENSHGLG00000018321	NSUN5	91	44.601	Heterocephalus_glaber_female
ENSCING00000023888	-	97	44.131	ENSHGLG00100003118	NSUN5	91	44.131	Heterocephalus_glaber_male
ENSCING00000023888	-	97	45.843	ENSHCOG00000002678	nsun5	96	45.843	Hippocampus_comes
ENSCING00000023888	-	98	44.444	ENSIPUG00000009246	NSUN5	88	44.444	Ictalurus_punctatus
ENSCING00000023888	-	88	44.271	ENSSTOG00000015023	NSUN5	89	44.271	Ictidomys_tridecemlineatus
ENSCING00000023888	-	97	44.836	ENSJJAG00000012146	Nsun5	90	44.836	Jaculus_jaculus
ENSCING00000023888	-	97	44.787	ENSKMAG00000011806	nsun5	96	45.972	Kryptolebias_marmoratus
ENSCING00000023888	-	97	44.418	ENSLBEG00000007743	nsun5	84	44.418	Labrus_bergylta
ENSCING00000023888	-	98	47.059	ENSLACG00000018926	NSUN5	90	46.853	Latimeria_chalumnae
ENSCING00000023888	-	98	43.396	ENSLOCG00000001105	nsun5	86	43.396	Lepisosteus_oculatus
ENSCING00000023888	-	98	43.427	ENSLAFG00000017255	NSUN5	91	43.427	Loxodonta_africana
ENSCING00000023888	-	100	42.568	ENSMFAG00000037773	NSUN5	94	42.568	Macaca_fascicularis
ENSCING00000023888	-	97	43.632	ENSMMUG00000022776	NSUN5	91	43.632	Macaca_mulatta
ENSCING00000023888	-	97	43.868	ENSMNEG00000032761	NSUN5	91	43.868	Macaca_nemestrina
ENSCING00000023888	-	97	44.104	ENSMLEG00000033115	NSUN5	91	44.104	Mandrillus_leucophaeus
ENSCING00000023888	-	97	45.131	ENSMAMG00000017048	nsun5	80	45.131	Mastacembelus_armatus
ENSCING00000023888	-	99	45.349	ENSMZEG00005020689	nsun5	85	45.349	Maylandia_zebra
ENSCING00000023888	-	68	46.758	ENSMGAG00000001654	NSUN5	85	46.758	Meleagris_gallopavo
ENSCING00000023888	-	97	44.000	ENSMAUG00000019013	Nsun5	91	44.000	Mesocricetus_auratus
ENSCING00000023888	-	95	43.584	ENSMICG00000035469	NSUN5	91	43.632	Microcebus_murinus
ENSCING00000023888	-	95	44.686	ENSMOCG00000021028	Nsun5	91	44.836	Microtus_ochrogaster
ENSCING00000023888	-	98	45.519	ENSMMOG00000021664	nsun5	90	48.980	Mola_mola
ENSCING00000023888	-	97	44.917	ENSMODG00000013753	NSUN5	92	44.917	Monodelphis_domestica
ENSCING00000023888	-	97	44.656	ENSMALG00000003855	nsun5	84	44.656	Monopterus_albus
ENSCING00000023888	-	95	44.068	MGP_CAROLIEiJ_G0027835	Nsun5	91	44.235	Mus_caroli
ENSCING00000023888	-	95	44.068	ENSMUSG00000000916	Nsun5	91	44.235	Mus_musculus
ENSCING00000023888	-	95	44.310	MGP_PahariEiJ_G0024415	Nsun5	91	44.471	Mus_pahari
ENSCING00000023888	-	95	44.552	MGP_SPRETEiJ_G0028834	Nsun5	91	44.706	Mus_spretus
ENSCING00000023888	-	97	43.632	ENSMPUG00000016038	NSUN5	89	43.632	Mustela_putorius_furo
ENSCING00000023888	-	95	43.961	ENSMLUG00000008380	NSUN5	90	44.000	Myotis_lucifugus
ENSCING00000023888	-	95	44.794	ENSNGAG00000015157	Nsun5	91	44.941	Nannospalax_galili
ENSCING00000023888	-	99	45.116	ENSNBRG00000001723	nsun5	85	45.116	Neolamprologus_brichardi
ENSCING00000023888	-	95	39.552	ENSNLEG00000015518	-	89	39.855	Nomascus_leucogenys
ENSCING00000023888	-	97	36.879	ENSNLEG00000008648	-	90	36.879	Nomascus_leucogenys
ENSCING00000023888	-	97	44.076	ENSMEUG00000012463	NSUN5	98	44.076	Notamacropus_eugenii
ENSCING00000023888	-	98	43.427	ENSOPRG00000006191	NSUN5	90	43.427	Ochotona_princeps
ENSCING00000023888	-	97	44.366	ENSODEG00000015132	NSUN5	90	44.601	Octodon_degus
ENSCING00000023888	-	97	45.368	ENSONIG00000001912	nsun5	85	45.368	Oreochromis_niloticus
ENSCING00000023888	-	92	44.638	ENSOANG00000014405	-	90	44.638	Ornithorhynchus_anatinus
ENSCING00000023888	-	97	45.390	ENSORLG00000003480	nsun5	87	46.572	Oryzias_latipes
ENSCING00000023888	-	97	45.368	ENSORLG00020017611	nsun5	86	46.556	Oryzias_latipes_hni
ENSCING00000023888	-	89	44.935	ENSORLG00015009554	nsun5	55	46.234	Oryzias_latipes_hsok
ENSCING00000023888	-	99	44.342	ENSOMEG00000006110	nsun5	88	45.497	Oryzias_melastigma
ENSCING00000023888	-	97	44.471	ENSOGAG00000002362	NSUN5	91	44.471	Otolemur_garnettii
ENSCING00000023888	-	91	44.750	ENSOARG00000012934	NSUN5	90	45.000	Ovis_aries
ENSCING00000023888	-	95	43.341	ENSPPAG00000037296	NSUN5	98	40.189	Pan_paniscus
ENSCING00000023888	-	97	43.192	ENSPPRG00000014831	NSUN5	86	43.427	Panthera_pardus
ENSCING00000023888	-	97	41.080	ENSPTRG00000046760	-	90	41.920	Pan_troglodytes
ENSCING00000023888	-	95	43.689	ENSPTRG00000045195	-	91	43.868	Pan_troglodytes
ENSCING00000023888	-	95	43.689	ENSPTRG00000019268	NSUN5	90	43.868	Pan_troglodytes
ENSCING00000023888	-	97	40.845	ENSPTRG00000042795	-	90	41.686	Pan_troglodytes
ENSCING00000023888	-	97	44.104	ENSPANG00000018605	NSUN5	91	44.104	Papio_anubis
ENSCING00000023888	-	99	44.342	ENSPKIG00000010935	nsun5	87	45.047	Paramormyrops_kingsleyae
ENSCING00000023888	-	80	43.466	ENSPSIG00000007787	NSUN5	87	43.466	Pelodiscus_sinensis
ENSCING00000023888	-	97	43.333	ENSPMGG00000000744	nsun5	94	45.130	Periophthalmus_magnuspinnatus
ENSCING00000023888	-	95	44.552	ENSPEMG00000010466	Nsun5	91	44.706	Peromyscus_maniculatus_bairdii
ENSCING00000023888	-	99	43.548	ENSPCIG00000023276	NSUN5	94	43.548	Phascolarctos_cinereus
ENSCING00000023888	-	97	44.869	ENSPFOG00000006001	nsun5	84	44.869	Poecilia_formosa
ENSCING00000023888	-	97	44.869	ENSPLAG00000009355	nsun5	84	44.869	Poecilia_latipinna
ENSCING00000023888	-	97	43.914	ENSPMEG00000006237	nsun5	84	45.107	Poecilia_mexicana
ENSCING00000023888	-	97	45.107	ENSPREG00000000892	nsun5	97	45.107	Poecilia_reticulata
ENSCING00000023888	-	59	48.400	ENSPPYG00000017479	-	83	48.400	Pongo_abelii
ENSCING00000023888	-	83	40.984	ENSPPYG00000017508	-	99	41.270	Pongo_abelii
ENSCING00000023888	-	57	45.161	ENSPCAG00000010802	-	84	45.161	Procavia_capensis
ENSCING00000023888	-	95	44.068	ENSPCOG00000026928	NSUN5	91	44.104	Propithecus_coquereli
ENSCING00000023888	-	97	43.396	ENSPVAG00000012102	NSUN5	91	43.396	Pteropus_vampyrus
ENSCING00000023888	-	99	45.349	ENSPNYG00000009412	nsun5	85	45.349	Pundamilia_nyererei
ENSCING00000023888	-	100	44.064	ENSPNAG00000005627	nsun5	90	44.064	Pygocentrus_nattereri
ENSCING00000023888	-	97	44.917	ENSRNOG00000001450	Nsun5	93	44.917	Rattus_norvegicus
ENSCING00000023888	-	95	43.932	ENSRBIG00000031049	NSUN5	91	44.104	Rhinopithecus_bieti
ENSCING00000023888	-	95	43.932	ENSRROG00000041917	NSUN5	91	44.104	Rhinopithecus_roxellana
ENSCING00000023888	-	91	32.743	YNL022C	-	91	34.076	Saccharomyces_cerevisiae
ENSCING00000023888	-	72	46.519	ENSSBOG00000028211	NSUN5	98	45.897	Saimiri_boliviensis_boliviensis
ENSCING00000023888	-	97	41.371	ENSSHAG00000015172	NSUN5	92	41.371	Sarcophilus_harrisii
ENSCING00000023888	-	98	44.811	ENSSFOG00015004641	nsun5	87	44.811	Scleropages_formosus
ENSCING00000023888	-	98	43.499	ENSSMAG00000014614	nsun5	85	43.499	Scophthalmus_maximus
ENSCING00000023888	-	97	46.081	ENSSDUG00000015935	nsun5	96	45.843	Seriola_dumerili
ENSCING00000023888	-	97	46.318	ENSSLDG00000023045	nsun5	96	45.107	Seriola_lalandi_dorsalis
ENSCING00000023888	-	86	44.236	ENSSPUG00000000580	NSUN5	97	44.236	Sphenodon_punctatus
ENSCING00000023888	-	97	45.843	ENSSPAG00000002242	nsun5	84	45.843	Stegastes_partitus
ENSCING00000023888	-	95	43.099	ENSSSCG00000007704	NSUN5	91	43.059	Sus_scrofa
ENSCING00000023888	-	97	42.925	ENSTGUG00000003110	NSUN5	91	42.925	Taeniopygia_guttata
ENSCING00000023888	-	99	46.047	ENSTRUG00000017748	nsun5	85	46.047	Takifugu_rubripes
ENSCING00000023888	-	97	45.107	ENSTNIG00000012017	nsun5	86	45.107	Tetraodon_nigroviridis
ENSCING00000023888	-	77	44.807	ENSUAMG00000016585	NSUN5	72	45.198	Ursus_americanus
ENSCING00000023888	-	85	41.645	ENSUMAG00000013592	NSUN5	87	40.625	Ursus_maritimus
ENSCING00000023888	-	64	40.625	ENSVPAG00000007305	NSUN5	100	42.857	Vicugna_pacos
ENSCING00000023888	-	97	44.000	ENSVVUG00000024659	NSUN5	90	43.765	Vulpes_vulpes
ENSCING00000023888	-	98	43.953	ENSXETG00000010332	nsun5	87	43.953	Xenopus_tropicalis
ENSCING00000023888	-	97	45.585	ENSXCOG00000003176	nsun5	85	45.585	Xiphophorus_couchianus
ENSCING00000023888	-	97	43.541	ENSXMAG00000019220	nsun5	84	44.737	Xiphophorus_maculatus