EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024077 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 12810 bases
Position: chr3:658589-671398
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032566	Ribosomal_L7Ae	PF01248.26	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000037003	-	3150	-	ENSCINP00000032566	1004 (aa)	-	H2XSD2

Gene Model

Click here to download ENSCING00000024077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024077	-	99	33.271	ENSG00000138593	SECISBP2L	97	38.437	Homo_sapiens
ENSCING00000024077	-	86	34.828	ENSAPOG00000015429	SECISBP2L	82	34.894	Acanthochromis_polyacanthus
ENSCING00000024077	-	88	35.214	ENSAMEG00000001504	SECISBP2L	95	32.775	Ailuropoda_melanoleuca
ENSCING00000024077	-	76	41.176	ENSACIG00000020051	SECISBP2L	84	38.305	Amphilophus_citrinellus
ENSCING00000024077	-	86	35.124	ENSAOCG00000017002	SECISBP2L	82	35.363	Amphiprion_ocellaris
ENSCING00000024077	-	88	34.659	ENSAPEG00000024840	SECISBP2L	82	35.363	Amphiprion_percula
ENSCING00000024077	-	83	34.442	ENSATEG00000018252	SECISBP2L	82	34.764	Anabas_testudineus
ENSCING00000024077	-	99	33.971	ENSAPLG00000004694	SECISBP2L	95	33.606	Anas_platyrhynchos
ENSCING00000024077	-	97	34.095	ENSACAG00000006021	SECISBP2L	94	34.063	Anolis_carolinensis
ENSCING00000024077	-	99	33.333	ENSANAG00000027892	SECISBP2L	95	32.682	Aotus_nancymaae
ENSCING00000024077	-	84	34.322	ENSACLG00000017020	SECISBP2L	82	34.512	Astatotilapia_calliptera
ENSCING00000024077	-	86	34.505	ENSAMXG00000037811	SECISBP2L	79	37.600	Astyanax_mexicanus
ENSCING00000024077	-	99	34.133	ENSBTAG00000046553	SECISBP2L	95	33.801	Bos_taurus
ENSCING00000024077	-	99	33.240	ENSCJAG00000001637	SECISBP2L	95	33.210	Callithrix_jacchus
ENSCING00000024077	-	88	35.460	ENSCAFG00000014822	SECISBP2L	95	32.807	Canis_familiaris
ENSCING00000024077	-	99	34.164	ENSCHIG00000017527	SECISBP2L	94	34.114	Capra_hircus
ENSCING00000024077	-	100	33.053	ENSTSYG00000004333	SECISBP2L	95	32.243	Carlito_syrichta
ENSCING00000024077	-	83	34.792	ENSCAPG00000011554	SECISBP2L	79	34.812	Cavia_aperea
ENSCING00000024077	-	84	35.307	ENSCPOG00000003442	SECISBP2L	80	35.262	Cavia_porcellus
ENSCING00000024077	-	99	33.146	ENSCCAG00000030509	SECISBP2L	95	33.055	Cebus_capucinus
ENSCING00000024077	-	99	33.271	ENSCATG00000033967	SECISBP2L	95	33.240	Cercocebus_atys
ENSCING00000024077	-	86	35.294	ENSCLAG00000017094	SECISBP2L	93	33.176	Chinchilla_lanigera
ENSCING00000024077	-	99	33.085	ENSCSAG00000010632	SECISBP2L	95	33.054	Chlorocebus_sabaeus
ENSCING00000024077	-	68	40.155	ENSCHOG00000009317	SECISBP2L	65	40.106	Choloepus_hoffmanni
ENSCING00000024077	-	83	35.456	ENSCPBG00000024750	SECISBP2L	93	33.013	Chrysemys_picta_bellii
ENSCING00000024077	-	99	33.395	ENSCANG00000029294	SECISBP2L	95	33.147	Colobus_angolensis_palliatus
ENSCING00000024077	-	99	32.685	ENSCGRG00001018900	Secisbp2l	78	34.871	Cricetulus_griseus_chok1gshd
ENSCING00000024077	-	99	32.929	ENSCGRG00000011372	Secisbp2l	78	34.871	Cricetulus_griseus_crigri
ENSCING00000024077	-	83	34.952	ENSCVAG00000010490	SECISBP2L	74	44.492	Cyprinodon_variegatus
ENSCING00000024077	-	85	35.575	ENSDNOG00000035508	SECISBP2L	94	33.022	Dasypus_novemcinctus
ENSCING00000024077	-	86	35.363	ENSDORG00000008662	Secisbp2l	94	33.148	Dipodomys_ordii
ENSCING00000024077	-	72	42.581	ENSETEG00000019519	SECISBP2L	84	36.278	Echinops_telfairi
ENSCING00000024077	-	99	33.955	ENSEASG00005016797	SECISBP2L	95	33.924	Equus_asinus_asinus
ENSCING00000024077	-	94	41.960	ENSECAG00000011253	SECISBP2L	89	40.955	Equus_caballus
ENSCING00000024077	-	75	33.174	ENSEEUG00000012692	SECISBP2L	56	36.407	Erinaceus_europaeus
ENSCING00000024077	-	84	34.088	ENSELUG00000004052	SECISBP2L	70	43.548	Esox_lucius
ENSCING00000024077	-	99	33.799	ENSFCAG00000022355	SECISBP2L	95	33.364	Felis_catus
ENSCING00000024077	-	96	33.043	ENSFALG00000011503	SECISBP2L	93	32.852	Ficedula_albicollis
ENSCING00000024077	-	86	35.768	ENSFDAG00000016793	SECISBP2L	96	36.133	Fukomys_damarensis
ENSCING00000024077	-	83	34.416	ENSFHEG00000002604	SECISBP2L	91	32.881	Fundulus_heteroclitus
ENSCING00000024077	-	81	34.061	ENSGMOG00000014876	SECISBP2L	82	34.498	Gadus_morhua
ENSCING00000024077	-	87	34.677	ENSGALG00000041362	SECISBP2L	84	35.028	Gallus_gallus
ENSCING00000024077	-	83	34.755	ENSGAFG00000005460	SECISBP2L	79	34.727	Gambusia_affinis
ENSCING00000024077	-	86	34.029	ENSGACG00000016786	SECISBP2L	84	34.395	Gasterosteus_aculeatus
ENSCING00000024077	-	81	35.476	ENSGAGG00000008607	SECISBP2L	79	35.355	Gopherus_agassizii
ENSCING00000024077	-	99	33.271	ENSGGOG00000007289	SECISBP2L	95	33.333	Gorilla_gorilla
ENSCING00000024077	-	84	34.428	ENSHBUG00000012549	SECISBP2L	82	34.620	Haplochromis_burtoni
ENSCING00000024077	-	84	35.126	ENSHGLG00000010779	SECISBP2L	94	32.963	Heterocephalus_glaber_female
ENSCING00000024077	-	83	34.611	ENSHGLG00100015772	SECISBP2L	95	32.437	Heterocephalus_glaber_male
ENSCING00000024077	-	82	33.621	ENSHCOG00000001763	SECISBP2L	91	37.656	Hippocampus_comes
ENSCING00000024077	-	86	35.275	ENSSTOG00000005317	SECISBP2L	95	33.086	Ictidomys_tridecemlineatus
ENSCING00000024077	-	88	34.932	ENSJJAG00000014644	-	95	32.545	Jaculus_jaculus
ENSCING00000024077	-	83	34.468	ENSLBEG00000005166	SECISBP2L	81	34.574	Labrus_bergylta
ENSCING00000024077	-	83	35.785	ENSLACG00000012542	SECISBP2L	96	33.149	Latimeria_chalumnae
ENSCING00000024077	-	83	35.519	ENSLOCG00000013180	SECISBP2L	96	34.230	Lepisosteus_oculatus
ENSCING00000024077	-	99	33.489	ENSLAFG00000006484	SECISBP2L	97	32.928	Loxodonta_africana
ENSCING00000024077	-	99	33.271	ENSMFAG00000001802	SECISBP2L	95	33.240	Macaca_fascicularis
ENSCING00000024077	-	99	33.271	ENSMMUG00000009837	SECISBP2L	95	33.240	Macaca_mulatta
ENSCING00000024077	-	99	33.271	ENSMNEG00000032007	SECISBP2L	95	33.240	Macaca_nemestrina
ENSCING00000024077	-	99	33.426	ENSMLEG00000040214	SECISBP2L	95	33.084	Mandrillus_leucophaeus
ENSCING00000024077	-	82	35.028	ENSMAMG00000011674	SECISBP2L	73	44.708	Mastacembelus_armatus
ENSCING00000024077	-	84	34.322	ENSMZEG00005012079	SECISBP2L	82	34.512	Maylandia_zebra
ENSCING00000024077	-	99	33.242	ENSMGAG00000007165	SECISBP2L	95	32.849	Meleagris_gallopavo
ENSCING00000024077	-	84	35.084	ENSMAUG00000012011	Secisbp2l	85	34.413	Mesocricetus_auratus
ENSCING00000024077	-	99	33.364	ENSMICG00000013007	SECISBP2L	95	32.963	Microcebus_murinus
ENSCING00000024077	-	99	32.995	ENSMOCG00000014560	Secisbp2l	95	32.653	Microtus_ochrogaster
ENSCING00000024077	-	84	35.816	ENSMODG00000002516	SECISBP2L	94	32.964	Monodelphis_domestica
ENSCING00000024077	-	83	34.375	ENSMALG00000012480	SECISBP2L	82	34.657	Monopterus_albus
ENSCING00000024077	-	84	34.577	MGP_CAROLIEiJ_G0024231	Secisbp2l	99	39.535	Mus_caroli
ENSCING00000024077	-	84	34.797	ENSMUSG00000035093	Secisbp2l	98	39.535	Mus_musculus
ENSCING00000024077	-	84	34.361	MGP_PahariEiJ_G0025677	Secisbp2l	99	39.535	Mus_pahari
ENSCING00000024077	-	84	34.468	MGP_SPRETEiJ_G0025151	Secisbp2l	99	39.535	Mus_spretus
ENSCING00000024077	-	89	35.421	ENSMPUG00000012321	SECISBP2L	95	33.025	Mustela_putorius_furo
ENSCING00000024077	-	99	33.830	ENSMLUG00000012918	SECISBP2L	94	33.209	Myotis_lucifugus
ENSCING00000024077	-	85	36.048	ENSNGAG00000019213	Secisbp2l	95	33.550	Nannospalax_galili
ENSCING00000024077	-	84	34.319	ENSNBRG00000022500	SECISBP2L	82	34.509	Neolamprologus_brichardi
ENSCING00000024077	-	99	33.581	ENSNLEG00000006102	SECISBP2L	95	33.457	Nomascus_leucogenys
ENSCING00000024077	-	69	68.293	ENSMEUG00000003127	SECISBP2L	65	68.293	Notamacropus_eugenii
ENSCING00000024077	-	69	42.585	ENSOPRG00000010893	SECISBP2L	81	36.776	Ochotona_princeps
ENSCING00000024077	-	84	35.301	ENSODEG00000007846	SECISBP2L	96	32.649	Octodon_degus
ENSCING00000024077	-	82	33.869	ENSONIG00000013343	SECISBP2L	84	34.047	Oreochromis_niloticus
ENSCING00000024077	-	88	35.183	ENSOCUG00000006443	SECISBP2L	95	33.209	Oryctolagus_cuniculus
ENSCING00000024077	-	87	34.211	ENSORLG00000002324	SECISBP2L	81	34.641	Oryzias_latipes
ENSCING00000024077	-	86	34.358	ENSORLG00020021894	SECISBP2L	81	34.863	Oryzias_latipes_hni
ENSCING00000024077	-	86	34.113	ENSORLG00015021578	SECISBP2L	81	33.871	Oryzias_latipes_hsok
ENSCING00000024077	-	71	42.857	ENSOMEG00000009535	SECISBP2L	72	43.545	Oryzias_melastigma
ENSCING00000024077	-	99	33.240	ENSOGAG00000013280	SECISBP2L	95	32.840	Otolemur_garnettii
ENSCING00000024077	-	99	34.158	ENSOARG00000021008	SECISBP2L	95	34.108	Ovis_aries
ENSCING00000024077	-	88	35.226	ENSPPAG00000036433	SECISBP2L	95	33.426	Pan_paniscus
ENSCING00000024077	-	99	33.704	ENSPPRG00000020790	SECISBP2L	95	33.456	Panthera_pardus
ENSCING00000024077	-	99	33.704	ENSPTIG00000020397	SECISBP2L	95	33.456	Panthera_tigris_altaica
ENSCING00000024077	-	99	33.271	ENSPTRG00000007050	SECISBP2L	95	33.333	Pan_troglodytes
ENSCING00000024077	-	99	33.271	ENSPANG00000017735	SECISBP2L	95	33.240	Papio_anubis
ENSCING00000024077	-	87	35.431	ENSPKIG00000020244	SECISBP2L	81	36.090	Paramormyrops_kingsleyae
ENSCING00000024077	-	83	35.762	ENSPSIG00000011270	SECISBP2L	94	32.961	Pelodiscus_sinensis
ENSCING00000024077	-	97	31.363	ENSPMGG00000023554	SECISBP2L	93	31.973	Periophthalmus_magnuspinnatus
ENSCING00000024077	-	84	34.868	ENSPEMG00000010577	Secisbp2l	95	32.629	Peromyscus_maniculatus_bairdii
ENSCING00000024077	-	70	55.459	ENSPCIG00000018047	SECISBP2L	89	41.058	Phascolarctos_cinereus
ENSCING00000024077	-	83	35.181	ENSPFOG00000004217	SECISBP2L	84	35.011	Poecilia_formosa
ENSCING00000024077	-	83	35.444	ENSPLAG00000017301	SECISBP2L	80	35.466	Poecilia_latipinna
ENSCING00000024077	-	83	35.651	ENSPMEG00000000627	SECISBP2L	81	34.045	Poecilia_mexicana
ENSCING00000024077	-	83	33.835	ENSPREG00000008660	SECISBP2L	84	33.873	Poecilia_reticulata
ENSCING00000024077	-	99	33.271	ENSPPYG00000006459	SECISBP2L	95	33.333	Pongo_abelii
ENSCING00000024077	-	84	35.706	ENSPVAG00000011821	SECISBP2L	95	33.150	Pteropus_vampyrus
ENSCING00000024077	-	84	34.319	ENSPNYG00000008760	SECISBP2L	82	34.509	Pundamilia_nyererei
ENSCING00000024077	-	99	32.627	ENSRNOG00000008629	Secisbp2l	78	35.268	Rattus_norvegicus
ENSCING00000024077	-	99	33.116	ENSRBIG00000030953	SECISBP2L	95	32.714	Rhinopithecus_bieti
ENSCING00000024077	-	99	33.240	ENSRROG00000042289	SECISBP2L	95	33.148	Rhinopithecus_roxellana
ENSCING00000024077	-	99	33.239	ENSSBOG00000024354	SECISBP2L	95	33.055	Saimiri_boliviensis_boliviensis
ENSCING00000024077	-	99	33.210	ENSSHAG00000016105	SECISBP2L	94	33.087	Sarcophilus_harrisii
ENSCING00000024077	-	83	34.973	ENSSFOG00015013377	secisbp2l	81	35.568	Scleropages_formosus
ENSCING00000024077	-	83	33.618	ENSSFOG00015017673	SECISBP2L	64	36.906	Scleropages_formosus
ENSCING00000024077	-	90	33.497	ENSSMAG00000021285	SECISBP2L	81	34.520	Scophthalmus_maximus
ENSCING00000024077	-	90	33.871	ENSSDUG00000016367	SECISBP2L	81	35.076	Seriola_dumerili
ENSCING00000024077	-	82	34.902	ENSSLDG00000009089	SECISBP2L	81	35.076	Seriola_lalandi_dorsalis
ENSCING00000024077	-	66	36.859	ENSSARG00000010659	-	61	35.759	Sorex_araneus
ENSCING00000024077	-	99	33.240	ENSSPUG00000011486	SECISBP2L	94	32.962	Sphenodon_punctatus
ENSCING00000024077	-	83	34.475	ENSSPAG00000019869	SECISBP2L	82	34.442	Stegastes_partitus
ENSCING00000024077	-	99	33.950	ENSSSCG00000004653	SECISBP2L	89	41.791	Sus_scrofa
ENSCING00000024077	-	83	35.072	ENSTGUG00000007252	-	97	32.336	Taeniopygia_guttata
ENSCING00000024077	-	83	35.173	ENSTRUG00000016925	SECISBP2L	76	43.856	Takifugu_rubripes
ENSCING00000024077	-	82	35.920	ENSTNIG00000009531	SECISBP2L	84	35.667	Tetraodon_nigroviridis
ENSCING00000024077	-	99	33.519	ENSTTRG00000009412	SECISBP2L	95	33.148	Tursiops_truncatus
ENSCING00000024077	-	89	34.990	ENSUMAG00000014412	SECISBP2L	95	32.930	Ursus_maritimus
ENSCING00000024077	-	85	36.060	ENSVPAG00000008350	SECISBP2L	95	33.798	Vicugna_pacos
ENSCING00000024077	-	88	35.460	ENSVVUG00000016354	SECISBP2L	95	32.715	Vulpes_vulpes
ENSCING00000024077	-	99	31.876	ENSXETG00000008783	secisbp2l	95	31.550	Xenopus_tropicalis
ENSCING00000024077	-	83	34.934	ENSXCOG00000018386	SECISBP2L	81	35.072	Xiphophorus_couchianus
ENSCING00000024077	-	83	35.022	ENSXMAG00000002266	SECISBP2L	80	34.248	Xiphophorus_maculatus