EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024084 (Gene tree)
Gene ID: 100169987
Gene Symbol: zf(cchc)-17
Alias: Ci-ZF(CCHC)-17
Full Name: Ciona intestinalis zinc finger protein ZF(CCHC)-17 (zf(cchc)-17)%2C mRNA.
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3990 bases
Position: chr12:825428-829417
Accession: NM_001129858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032715	CSD	PF00313.22	9.9e-23	1	1
ENSCINP00000032715	zf-CCHC	PF00098.23	1.8e-09	1	2
ENSCINP00000032715	zf-CCHC	PF00098.23	1.8e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032412	-	1013	XM_009862064	ENSCINP00000032715	194 (aa)	XP_009860366	A0A1W3JL17

Gene Model

Click here to download ENSCING00000024084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024084	zf(cchc)-17	85	55.556	ENSCSAVG00000006524	-	97	55.429	Ciona_savignyi
ENSCING00000024084	zf(cchc)-17	68	46.617	FBgn0035626	lin-28	80	44.025	Drosophila_melanogaster