EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000024100 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
1678 bases
Position
chr6:1078224-1079901
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000035102LSMPF01423.221.2e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000035448-650-ENSCINP00000035102125 (aa)-H2XZL8
Gene Model
Click here to download ENSCING00000024100's gene model file
Pathways
Pathway IDPathway NameSource
cin03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024100's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000024100-6987.209ENSG00000167088SNRPD16896.667Homo_sapiens
ENSCING00000024100-6687.805ENSAMEG00000002576SNRPD17087.805Ailuropoda_melanoleuca
ENSCING00000024100-6384.810ENSACIG00000011263snrpd17184.810Amphilophus_citrinellus
ENSCING00000024100-6984.884ENSAOCG00000007406snrpd17284.884Amphiprion_ocellaris
ENSCING00000024100-6384.810ENSAPEG00000012539SNRPD17184.810Amphiprion_percula
ENSCING00000024100-6979.070ENSAPEG00000014961snrpd17179.070Amphiprion_percula
ENSCING00000024100-6984.884ENSATEG00000014399snrpd17284.884Anabas_testudineus
ENSCING00000024100-6785.714ENSAPLG00000012256SNRPD17185.714Anas_platyrhynchos
ENSCING00000024100-6987.209ENSACAG00000006364SNRPD17287.209Anolis_carolinensis
ENSCING00000024100-6987.209ENSANAG00000025641SNRPD17287.209Aotus_nancymaae
ENSCING00000024100-6384.810ENSACLG00000017406snrpd17184.810Astatotilapia_calliptera
ENSCING00000024100-8474.286ENSAMXG00000004589snrpd17284.884Astyanax_mexicanus
ENSCING00000024100-6783.333ENSBTAG00000055316-7283.333Bos_taurus
ENSCING00000024100-6984.884ENSBTAG00000012376-8871.186Bos_taurus
ENSCING00000024100-6987.209ENSBTAG00000008292SNRPD17287.209Bos_taurus
ENSCING00000024100-6984.884ENSBTAG00000047266-7284.884Bos_taurus
ENSCING00000024100-7077.011WBGene00004916snr-36977.011Caenorhabditis_elegans
ENSCING00000024100-6987.209ENSCJAG00000042955SNRPD17287.209Callithrix_jacchus
ENSCING00000024100-6987.209ENSCAFG00000018247SNRPD17287.209Canis_familiaris
ENSCING00000024100-6987.209ENSCAFG00020015914SNRPD16787.209Canis_lupus_dingo
ENSCING00000024100-6786.905ENSCHIG00000005557SNRPD17186.905Capra_hircus
ENSCING00000024100-6987.209ENSTSYG00000030028SNRPD17287.209Carlito_syrichta
ENSCING00000024100-6686.585ENSCAPG00000008103SNRPD17186.585Cavia_aperea
ENSCING00000024100-6987.209ENSCPOG00000004679SNRPD17287.209Cavia_porcellus
ENSCING00000024100-6984.884ENSCCAG00000016652-7284.884Cebus_capucinus
ENSCING00000024100-6987.209ENSCCAG00000032658SNRPD17287.209Cebus_capucinus
ENSCING00000024100-6982.558ENSCCAG00000005390-7282.558Cebus_capucinus
ENSCING00000024100-6986.047ENSCCAG00000020611-7286.047Cebus_capucinus
ENSCING00000024100-6987.209ENSCATG00000039978SNRPD17287.209Cercocebus_atys
ENSCING00000024100-6987.209ENSCLAG00000008691SNRPD17287.209Chinchilla_lanigera
ENSCING00000024100-6987.209ENSCSAG00000017654SNRPD17287.209Chlorocebus_sabaeus
ENSCING00000024100-6987.209ENSCPBG00000023143SNRPD17487.209Chrysemys_picta_bellii
ENSCING00000024100-9589.916ENSCSAVG00000004578-9589.916Ciona_savignyi
ENSCING00000024100-6963.953ENSCGRG00001009945-7463.953Cricetulus_griseus_chok1gshd
ENSCING00000024100-6987.209ENSCGRG00001021055-7287.209Cricetulus_griseus_chok1gshd
ENSCING00000024100-6963.953ENSCGRG00000006224-7463.953Cricetulus_griseus_crigri
ENSCING00000024100-6987.209ENSCGRG00000000490-7287.209Cricetulus_griseus_crigri
ENSCING00000024100-6983.721ENSCSEG00000018141snrpd17283.721Cynoglossus_semilaevis
ENSCING00000024100-6984.884ENSCVAG00000000534snrpd17284.884Cyprinodon_variegatus
ENSCING00000024100-6984.884ENSDARG00000011648snrpd18784.337Danio_rerio
ENSCING00000024100-6987.209ENSDNOG00000040310SNRPD17287.209Dasypus_novemcinctus
ENSCING00000024100-6987.209ENSDORG00000008349Snrpd17287.209Dipodomys_ordii
ENSCING00000024100-7083.908FBgn0261933SmD17083.908Drosophila_melanogaster
ENSCING00000024100-8576.415ENSEBUG00000003170snrpd18587.209Eptatretus_burgeri
ENSCING00000024100-6387.342ENSEASG00005002433SNRPD17187.342Equus_asinus_asinus
ENSCING00000024100-6387.342ENSECAG00000014373SNRPD17187.342Equus_caballus
ENSCING00000024100-6587.654ENSEEUG00000004987SNRPD19187.654Erinaceus_europaeus
ENSCING00000024100-8871.171ENSELUG00000000088snrpd17283.721Esox_lucius
ENSCING00000024100-6987.209ENSFCAG00000012352SNRPD17287.209Felis_catus
ENSCING00000024100-6387.342ENSFALG00000002646SNRPD17187.342Ficedula_albicollis
ENSCING00000024100-6984.884ENSGMOG00000015607snrpd17284.884Gadus_morhua
ENSCING00000024100-6987.209ENSGALG00000041334SNRPD17287.209Gallus_gallus
ENSCING00000024100-6984.884ENSGAFG00000011171snrpd17284.884Gambusia_affinis
ENSCING00000024100-6984.884ENSGACG00000005201SNRPD17284.884Gasterosteus_aculeatus
ENSCING00000024100-6987.209ENSGAGG00000011197SNRPD17287.209Gopherus_agassizii
ENSCING00000024100-6987.209ENSGGOG00000041053SNRPD17287.209Gorilla_gorilla
ENSCING00000024100-6981.395ENSGGOG00000026706-7281.395Gorilla_gorilla
ENSCING00000024100-6984.884ENSHBUG00000003236snrpd17284.884Haplochromis_burtoni
ENSCING00000024100-6987.209ENSHGLG00000007152SNRPD17287.209Heterocephalus_glaber_female
ENSCING00000024100-6987.209ENSHGLG00100008618SNRPD17287.209Heterocephalus_glaber_male
ENSCING00000024100-6984.884ENSIPUG00000003576snrpd17284.884Ictalurus_punctatus
ENSCING00000024100-6987.209ENSSTOG00000000485SNRPD17287.209Ictidomys_tridecemlineatus
ENSCING00000024100-6987.209ENSJJAG00000017698Snrpd17287.209Jaculus_jaculus
ENSCING00000024100-6984.884ENSKMAG00000005987snrpd17284.884Kryptolebias_marmoratus
ENSCING00000024100-6984.884ENSLBEG00000003327snrpd17284.884Labrus_bergylta
ENSCING00000024100-6987.209ENSLACG00000001955SNRPD17287.209Latimeria_chalumnae
ENSCING00000024100-6788.095ENSLOCG00000002003snrpd17288.095Lepisosteus_oculatus
ENSCING00000024100-6885.882ENSLAFG00000005819SNRPD17285.882Loxodonta_africana
ENSCING00000024100-6987.209ENSMFAG00000042080SNRPD17287.209Macaca_fascicularis
ENSCING00000024100-6785.714ENSMMUG00000003992SNRPD16987.654Macaca_mulatta
ENSCING00000024100-6987.209ENSMNEG00000041296SNRPD17287.209Macaca_nemestrina
ENSCING00000024100-6987.209ENSMLEG00000028659SNRPD17287.209Mandrillus_leucophaeus
ENSCING00000024100-6984.884ENSMAMG00000012971snrpd17284.884Mastacembelus_armatus
ENSCING00000024100-6984.884ENSMZEG00005004685snrpd17284.884Maylandia_zebra
ENSCING00000024100-6785.714ENSMGAG00000011598SNRPD16985.714Meleagris_gallopavo
ENSCING00000024100-7667.368ENSMAUG00000016467-7772.093Mesocricetus_auratus
ENSCING00000024100-7667.368ENSMAUG00000016502-7772.093Mesocricetus_auratus
ENSCING00000024100-8076.000ENSMAUG00000006829-5487.805Mesocricetus_auratus
ENSCING00000024100-6987.209ENSMICG00000044066SNRPD17287.209Microcebus_murinus
ENSCING00000024100-6987.209ENSMOCG00000017367Snrpd17287.209Microtus_ochrogaster
ENSCING00000024100-6984.884ENSMMOG00000019089snrpd17284.884Mola_mola
ENSCING00000024100-6987.209ENSMODG00000021487SNRPD17287.209Monodelphis_domestica
ENSCING00000024100-6984.884ENSMALG00000014459snrpd17284.884Monopterus_albus
ENSCING00000024100-6987.209MGP_CAROLIEiJ_G0021994Snrpd17287.209Mus_caroli
ENSCING00000024100-6987.209ENSMUSG00000002477Snrpd17287.209Mus_musculus
ENSCING00000024100-6987.209MGP_PahariEiJ_G0018731Snrpd17287.209Mus_pahari
ENSCING00000024100-6987.209MGP_SPRETEiJ_G0022910Snrpd17287.209Mus_spretus
ENSCING00000024100-6687.805ENSMPUG00000005567-7087.805Mustela_putorius_furo
ENSCING00000024100-6986.047ENSMPUG00000020041-7286.047Mustela_putorius_furo
ENSCING00000024100-6786.905ENSMLUG00000009124SNRPD16586.905Myotis_lucifugus
ENSCING00000024100-6987.209ENSNGAG00000023946Snrpd17287.209Nannospalax_galili
ENSCING00000024100-6984.884ENSNBRG00000012119snrpd17184.884Neolamprologus_brichardi
ENSCING00000024100-6983.721ENSNLEG00000031430SNRPD17283.721Nomascus_leucogenys
ENSCING00000024100-6987.209ENSODEG00000005764SNRPD17287.209Octodon_degus
ENSCING00000024100-6984.884ENSONIG00000002486snrpd17284.884Oreochromis_niloticus
ENSCING00000024100-6680.488ENSOANG00000004638-6980.488Ornithorhynchus_anatinus
ENSCING00000024100-6687.805ENSOCUG00000023761-7087.805Oryctolagus_cuniculus
ENSCING00000024100-6986.047ENSOCUG00000014399-7286.047Oryctolagus_cuniculus
ENSCING00000024100-6384.810ENSORLG00000012516snrpd17184.810Oryzias_latipes
ENSCING00000024100-6984.884ENSORLG00020005743snrpd17284.884Oryzias_latipes_hni
ENSCING00000024100-6984.884ENSORLG00015013402snrpd17284.884Oryzias_latipes_hsok
ENSCING00000024100-6984.884ENSOMEG00000011571snrpd17284.884Oryzias_melastigma
ENSCING00000024100-6785.714ENSOGAG00000007833SNRPD17185.714Otolemur_garnettii
ENSCING00000024100-6987.209ENSOARG00000003413-6587.209Ovis_aries
ENSCING00000024100-6987.209ENSPPAG00000042593SNRPD17287.209Pan_paniscus
ENSCING00000024100-6987.209ENSPPRG00000002399SNRPD17287.209Panthera_pardus
ENSCING00000024100-6959.302ENSPPRG00000005009-6459.302Panthera_pardus
ENSCING00000024100-6587.654ENSPTIG00000013206SNRPD17187.654Panthera_tigris_altaica
ENSCING00000024100-6982.558ENSPTRG00000050159-7482.558Pan_troglodytes
ENSCING00000024100-6987.209ENSPTRG00000009909SNRPD17287.209Pan_troglodytes
ENSCING00000024100-6987.209ENSPANG00000023478SNRPD17287.209Papio_anubis
ENSCING00000024100-6986.047ENSPKIG00000003985SNRPD17286.047Paramormyrops_kingsleyae
ENSCING00000024100-6384.810ENSPKIG00000021610snrpd17184.810Paramormyrops_kingsleyae
ENSCING00000024100-6984.884ENSPMGG00000001862snrpd17284.884Periophthalmus_magnuspinnatus
ENSCING00000024100-6987.209ENSPEMG00000014773-7287.209Peromyscus_maniculatus_bairdii
ENSCING00000024100-6988.636ENSPMAG00000003938-7288.636Petromyzon_marinus
ENSCING00000024100-6987.209ENSPCIG00000020320SNRPD17287.209Phascolarctos_cinereus
ENSCING00000024100-6984.884ENSPFOG00000012448SNRPD17684.884Poecilia_formosa
ENSCING00000024100-6984.884ENSPLAG00000006738snrpd17684.884Poecilia_latipinna
ENSCING00000024100-6984.884ENSPMEG00000021942snrpd17684.884Poecilia_mexicana
ENSCING00000024100-6984.884ENSPREG00000007094snrpd17284.884Poecilia_reticulata
ENSCING00000024100-6987.209ENSPPYG00000025874SNRPD17287.209Pongo_abelii
ENSCING00000024100-6987.209ENSPCOG00000013327SNRPD17287.209Propithecus_coquereli
ENSCING00000024100-6987.209ENSPVAG00000005511SNRPD15887.209Pteropus_vampyrus
ENSCING00000024100-6984.884ENSPNAG00000017824snrpd17284.884Pygocentrus_nattereri
ENSCING00000024100-6987.209ENSRNOG00000013714Snrpd17287.209Rattus_norvegicus
ENSCING00000024100-6987.209ENSRBIG00000022996SNRPD17287.209Rhinopithecus_bieti
ENSCING00000024100-6987.209ENSRROG00000027640SNRPD17287.209Rhinopithecus_roxellana
ENSCING00000024100-6987.209ENSSBOG00000020998SNRPD17287.209Saimiri_boliviensis_boliviensis
ENSCING00000024100-6987.209ENSSHAG00000011791SNRPD17287.209Sarcophilus_harrisii
ENSCING00000024100-6986.047ENSSFOG00015022253-7286.047Scleropages_formosus
ENSCING00000024100-6986.047ENSSFOG00015008809-7286.047Scleropages_formosus
ENSCING00000024100-6984.884ENSSMAG00000008765snrpd17284.884Scophthalmus_maximus
ENSCING00000024100-6683.133ENSSDUG00000010521snrpd16984.146Seriola_dumerili
ENSCING00000024100-6984.884ENSSLDG00000011858snrpd17284.884Seriola_lalandi_dorsalis
ENSCING00000024100-5488.060ENSSARG00000004271SNRPD110088.060Sorex_araneus
ENSCING00000024100-6987.209ENSSPUG00000002824SNRPD17287.209Sphenodon_punctatus
ENSCING00000024100-6384.810ENSSPAG00000015229snrpd17184.810Stegastes_partitus
ENSCING00000024100-6987.209ENSSSCG00000003701SNRPD17287.209Sus_scrofa
ENSCING00000024100-6785.714ENSTGUG00000005095SNRPD17185.714Taeniopygia_guttata
ENSCING00000024100-6384.810ENSTRUG00000008977snrpd17184.810Takifugu_rubripes
ENSCING00000024100-5677.143ENSTNIG00000001224snrpd16777.143Tetraodon_nigroviridis
ENSCING00000024100-6687.805ENSTTRG00000002654SNRPD17187.805Tursiops_truncatus
ENSCING00000024100-8178.218ENSUAMG00000013431SNRPD18687.209Ursus_americanus
ENSCING00000024100-6987.209ENSUMAG00000019740SNRPD17287.209Ursus_maritimus
ENSCING00000024100-6987.209ENSVPAG00000010056SNRPD15887.209Vicugna_pacos
ENSCING00000024100-6387.342ENSVVUG00000004009SNRPD17187.342Vulpes_vulpes
ENSCING00000024100-6987.209ENSXETG00000027354snrpd17287.209Xenopus_tropicalis
ENSCING00000024100-6984.884ENSXCOG00000020108snrpd17284.884Xiphophorus_couchianus
ENSCING00000024100-6984.884ENSXMAG00000003368snrpd17284.884Xiphophorus_maculatus

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