EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024107 (Gene tree)
Gene ID: 100185883
Gene Symbol: -
Alias: -
Full Name: alanine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2904 bases
Position: chr2:1028164-1031067
Accession: 100185883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035934	tRNA_SAD	PF07973.14	7.1e-13	1	1
ENSCINP00000035934	tRNA-synt_2c	PF01411.19	2.2e-212	1	1
ENSCINP00000035934	DHHA1	PF02272.19	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000035274	-	2904	XM_002125429	ENSCINP00000035934	967 (aa)	XP_002125465	H2Y1Z9

Gene Model

Click here to download ENSCING00000024107's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024107	-	99	59.217	ENSG00000090861	AARS	99	59.217	Homo_sapiens
ENSCING00000024107	-	99	59.381	ENSAPOG00000022413	aars	99	59.381	Acanthochromis_polyacanthus
ENSCING00000024107	-	99	59.732	ENSAMEG00000004815	AARS	99	59.732	Ailuropoda_melanoleuca
ENSCING00000024107	-	99	59.072	ENSACIG00000016586	aars	99	59.072	Amphilophus_citrinellus
ENSCING00000024107	-	99	59.175	ENSAOCG00000007036	aars	99	59.175	Amphiprion_ocellaris
ENSCING00000024107	-	99	59.278	ENSAPEG00000022892	aars	99	59.278	Amphiprion_percula
ENSCING00000024107	-	99	59.526	ENSATEG00000013826	aars	99	59.526	Anabas_testudineus
ENSCING00000024107	-	79	64.312	ENSAPLG00000008519	AARS	99	49.125	Anas_platyrhynchos
ENSCING00000024107	-	99	59.629	ENSACAG00000002808	AARS	99	59.629	Anolis_carolinensis
ENSCING00000024107	-	99	54.845	ENSANAG00000029082	AARS	98	65.532	Aotus_nancymaae
ENSCING00000024107	-	99	59.732	ENSACLG00000022314	aars	99	59.732	Astatotilapia_calliptera
ENSCING00000024107	-	100	59.835	ENSAMXG00000003368	aars	99	59.959	Astyanax_mexicanus
ENSCING00000024107	-	99	59.114	ENSBTAG00000019810	AARS	99	59.114	Bos_taurus
ENSCING00000024107	-	99	53.271	WBGene00000197	aars-2	99	53.271	Caenorhabditis_elegans
ENSCING00000024107	-	99	59.320	ENSCJAG00000014562	AARS	99	67.600	Callithrix_jacchus
ENSCING00000024107	-	99	59.217	ENSCAFG00000020132	AARS	99	59.217	Canis_familiaris
ENSCING00000024107	-	99	59.217	ENSCAFG00020020967	AARS	99	59.217	Canis_lupus_dingo
ENSCING00000024107	-	99	59.320	ENSCHIG00000015632	AARS	99	59.320	Capra_hircus
ENSCING00000024107	-	99	59.217	ENSTSYG00000010987	AARS	99	67.600	Carlito_syrichta
ENSCING00000024107	-	91	58.744	ENSCAPG00000013564	AARS	99	58.744	Cavia_aperea
ENSCING00000024107	-	99	59.526	ENSCPOG00000002373	AARS	99	59.526	Cavia_porcellus
ENSCING00000024107	-	99	59.278	ENSCCAG00000001818	AARS	95	67.257	Cebus_capucinus
ENSCING00000024107	-	99	59.320	ENSCATG00000032821	AARS	99	67.600	Cercocebus_atys
ENSCING00000024107	-	99	59.526	ENSCLAG00000004366	AARS	99	59.526	Chinchilla_lanigera
ENSCING00000024107	-	99	59.217	ENSCSAG00000004476	AARS	99	59.217	Chlorocebus_sabaeus
ENSCING00000024107	-	53	63.514	ENSCHOG00000000347	-	61	63.514	Choloepus_hoffmanni
ENSCING00000024107	-	99	59.175	ENSCPBG00000002995	AARS	99	59.175	Chrysemys_picta_bellii
ENSCING00000024107	-	99	80.849	ENSCSAVG00000000721	-	99	80.849	Ciona_savignyi
ENSCING00000024107	-	99	56.952	ENSCANG00000040257	AARS	99	67.200	Colobus_angolensis_palliatus
ENSCING00000024107	-	99	59.423	ENSCGRG00001014390	AARS	99	59.423	Cricetulus_griseus_chok1gshd
ENSCING00000024107	-	99	59.423	ENSCGRG00000017420	AARS	99	59.423	Cricetulus_griseus_crigri
ENSCING00000024107	-	99	59.175	ENSCSEG00000014258	aars	99	59.175	Cynoglossus_semilaevis
ENSCING00000024107	-	84	58.262	ENSCVAG00000000882	aars	99	58.573	Cyprinodon_variegatus
ENSCING00000024107	-	99	59.278	ENSDARG00000069142	aars	92	68.579	Danio_rerio
ENSCING00000024107	-	99	57.911	ENSDNOG00000004586	AARS	99	57.911	Dasypus_novemcinctus
ENSCING00000024107	-	99	59.423	ENSDORG00000004110	Aars	99	59.423	Dipodomys_ordii
ENSCING00000024107	-	99	56.037	FBgn0027094	AlaRS	99	56.037	Drosophila_melanogaster
ENSCING00000024107	-	99	54.377	ENSETEG00000002451	AARS	99	54.377	Echinops_telfairi
ENSCING00000024107	-	99	59.336	ENSEBUG00000004521	aars	99	59.336	Eptatretus_burgeri
ENSCING00000024107	-	99	59.629	ENSEASG00005013408	AARS	90	59.629	Equus_asinus_asinus
ENSCING00000024107	-	99	59.629	ENSECAG00000008561	AARS	95	59.629	Equus_caballus
ENSCING00000024107	-	93	63.057	ENSEEUG00000006335	AARS	93	63.057	Erinaceus_europaeus
ENSCING00000024107	-	99	59.588	ENSELUG00000015496	aars	99	59.588	Esox_lucius
ENSCING00000024107	-	99	59.938	ENSFCAG00000009482	AARS	99	59.938	Felis_catus
ENSCING00000024107	-	99	59.278	ENSFALG00000007196	AARS	99	59.278	Ficedula_albicollis
ENSCING00000024107	-	99	59.526	ENSFDAG00000011896	AARS	99	59.526	Fukomys_damarensis
ENSCING00000024107	-	57	61.733	ENSFHEG00000004067	aars	90	63.142	Fundulus_heteroclitus
ENSCING00000024107	-	99	54.180	ENSGMOG00000008147	aars	99	54.180	Gadus_morhua
ENSCING00000024107	-	99	59.175	ENSGALG00000001965	AARS	99	59.175	Gallus_gallus
ENSCING00000024107	-	99	59.629	ENSGAFG00000015182	aars	99	59.629	Gambusia_affinis
ENSCING00000024107	-	99	55.487	ENSGACG00000002667	aars	99	55.487	Gasterosteus_aculeatus
ENSCING00000024107	-	99	59.588	ENSGAGG00000014004	AARS	99	59.588	Gopherus_agassizii
ENSCING00000024107	-	90	68.780	ENSGGOG00000008737	AARS	99	68.780	Gorilla_gorilla
ENSCING00000024107	-	99	55.005	ENSHBUG00000011211	aars	99	55.005	Haplochromis_burtoni
ENSCING00000024107	-	99	59.526	ENSHGLG00000011756	AARS	99	59.526	Heterocephalus_glaber_female
ENSCING00000024107	-	99	59.629	ENSHGLG00100011337	AARS	99	59.629	Heterocephalus_glaber_male
ENSCING00000024107	-	99	58.969	ENSHCOG00000012089	aars	99	58.969	Hippocampus_comes
ENSCING00000024107	-	99	59.485	ENSIPUG00000020538	aars	99	59.485	Ictalurus_punctatus
ENSCING00000024107	-	99	59.217	ENSSTOG00000006856	AARS	99	59.217	Ictidomys_tridecemlineatus
ENSCING00000024107	-	99	59.011	ENSJJAG00000008731	Aars	99	59.011	Jaculus_jaculus
ENSCING00000024107	-	99	58.969	ENSKMAG00000009832	aars	99	58.969	Kryptolebias_marmoratus
ENSCING00000024107	-	99	59.381	ENSLBEG00000018551	aars	99	59.381	Labrus_bergylta
ENSCING00000024107	-	99	59.897	ENSLACG00000004892	AARS	99	59.897	Latimeria_chalumnae
ENSCING00000024107	-	99	58.350	ENSLAFG00000006645	AARS	99	58.350	Loxodonta_africana
ENSCING00000024107	-	99	59.423	ENSMFAG00000002309	AARS	97	67.249	Macaca_fascicularis
ENSCING00000024107	-	99	59.423	ENSMMUG00000021653	AARS	99	68.000	Macaca_mulatta
ENSCING00000024107	-	99	57.335	ENSMNEG00000014902	AARS	97	67.249	Macaca_nemestrina
ENSCING00000024107	-	95	56.182	ENSMLEG00000035037	AARS	99	56.182	Mandrillus_leucophaeus
ENSCING00000024107	-	99	59.485	ENSMAMG00000016945	aars	99	59.485	Mastacembelus_armatus
ENSCING00000024107	-	99	59.629	ENSMZEG00005010733	aars	99	59.629	Maylandia_zebra
ENSCING00000024107	-	99	59.278	ENSMGAG00000002038	AARS	99	59.278	Meleagris_gallopavo
ENSCING00000024107	-	100	59.259	ENSMAUG00000021342	Aars	99	59.259	Mesocricetus_auratus
ENSCING00000024107	-	100	59.507	ENSMICG00000000255	AARS	99	63.004	Microcebus_murinus
ENSCING00000024107	-	99	59.011	ENSMOCG00000005336	Aars	99	59.011	Microtus_ochrogaster
ENSCING00000024107	-	99	58.144	ENSMMOG00000002584	aars	99	58.144	Mola_mola
ENSCING00000024107	-	99	58.621	ENSMODG00000014518	AARS	99	58.621	Monodelphis_domestica
ENSCING00000024107	-	99	59.485	ENSMALG00000007912	aars	99	59.485	Monopterus_albus
ENSCING00000024107	-	99	59.217	ENSMUSG00000031960	Aars	99	59.217	Mus_musculus
ENSCING00000024107	-	99	59.732	ENSMPUG00000010060	AARS	99	59.732	Mustela_putorius_furo
ENSCING00000024107	-	99	59.629	ENSMLUG00000007431	AARS	99	59.629	Myotis_lucifugus
ENSCING00000024107	-	99	59.423	ENSNGAG00000003676	Aars	99	59.423	Nannospalax_galili
ENSCING00000024107	-	99	59.423	ENSNBRG00000007321	aars	99	59.423	Neolamprologus_brichardi
ENSCING00000024107	-	94	52.355	ENSMEUG00000016034	-	99	52.355	Notamacropus_eugenii
ENSCING00000024107	-	58	64.884	ENSMEUG00000006934	-	99	64.884	Notamacropus_eugenii
ENSCING00000024107	-	99	58.921	ENSOPRG00000003373	AARS	99	58.921	Ochotona_princeps
ENSCING00000024107	-	99	55.579	ENSODEG00000014435	-	99	55.579	Octodon_degus
ENSCING00000024107	-	80	63.462	ENSODEG00000014606	-	67	63.462	Octodon_degus
ENSCING00000024107	-	99	59.732	ENSONIG00000011185	aars	99	59.732	Oreochromis_niloticus
ENSCING00000024107	-	100	59.979	ENSOANG00000001157	AARS	99	59.979	Ornithorhynchus_anatinus
ENSCING00000024107	-	99	57.805	ENSOCUG00000008872	AARS	99	57.805	Oryctolagus_cuniculus
ENSCING00000024107	-	99	59.278	ENSORLG00000013398	aars	99	59.278	Oryzias_latipes
ENSCING00000024107	-	99	59.278	ENSORLG00020017581	aars	99	59.278	Oryzias_latipes_hni
ENSCING00000024107	-	99	59.175	ENSORLG00015007783	aars	99	59.175	Oryzias_latipes_hsok
ENSCING00000024107	-	99	58.969	ENSOMEG00000014361	aars	99	58.969	Oryzias_melastigma
ENSCING00000024107	-	99	59.423	ENSOGAG00000011601	AARS	99	59.423	Otolemur_garnettii
ENSCING00000024107	-	99	59.423	ENSOARG00000005286	AARS	99	59.423	Ovis_aries
ENSCING00000024107	-	99	59.114	ENSPPAG00000040404	AARS	99	67.600	Pan_paniscus
ENSCING00000024107	-	99	59.938	ENSPPRG00000013214	AARS	99	59.938	Panthera_pardus
ENSCING00000024107	-	99	59.938	ENSPTIG00000021477	AARS	99	59.938	Panthera_tigris_altaica
ENSCING00000024107	-	99	59.114	ENSPTRG00000008297	AARS	99	67.600	Pan_troglodytes
ENSCING00000024107	-	99	59.217	ENSPANG00000020452	AARS	97	66.376	Papio_anubis
ENSCING00000024107	-	99	59.649	ENSPKIG00000002593	aars	99	59.649	Paramormyrops_kingsleyae
ENSCING00000024107	-	99	58.787	ENSPSIG00000012820	AARS	99	58.787	Pelodiscus_sinensis
ENSCING00000024107	-	99	58.763	ENSPMGG00000016971	aars	99	58.763	Periophthalmus_magnuspinnatus
ENSCING00000024107	-	99	59.217	ENSPEMG00000010864	Aars	99	59.217	Peromyscus_maniculatus_bairdii
ENSCING00000024107	-	99	55.133	ENSPMAG00000001946	aars	100	54.816	Petromyzon_marinus
ENSCING00000024107	-	99	59.732	ENSPCIG00000010681	AARS	99	59.732	Phascolarctos_cinereus
ENSCING00000024107	-	99	59.485	ENSPFOG00000015763	aars	99	59.485	Poecilia_formosa
ENSCING00000024107	-	99	59.588	ENSPLAG00000014226	aars	99	59.588	Poecilia_latipinna
ENSCING00000024107	-	99	59.485	ENSPMEG00000019736	aars	99	59.485	Poecilia_mexicana
ENSCING00000024107	-	99	59.175	ENSPREG00000019562	aars	99	59.175	Poecilia_reticulata
ENSCING00000024107	-	76	65.193	ENSPPYG00000007544	-	76	65.193	Pongo_abelii
ENSCING00000024107	-	80	65.306	ENSPCAG00000012883	AARS	80	65.306	Procavia_capensis
ENSCING00000024107	-	99	59.362	ENSPCOG00000016630	AARS	99	62.774	Propithecus_coquereli
ENSCING00000024107	-	99	59.732	ENSPVAG00000000669	AARS	99	59.732	Pteropus_vampyrus
ENSCING00000024107	-	99	59.629	ENSPNYG00000010796	aars	99	59.629	Pundamilia_nyererei
ENSCING00000024107	-	99	59.278	ENSPNAG00000015269	aars	92	59.278	Pygocentrus_nattereri
ENSCING00000024107	-	99	58.908	ENSRNOG00000018404	Aars	99	58.908	Rattus_norvegicus
ENSCING00000024107	-	99	59.114	ENSRBIG00000032650	AARS	99	59.114	Rhinopithecus_bieti
ENSCING00000024107	-	99	59.423	ENSRROG00000027324	AARS	99	63.004	Rhinopithecus_roxellana
ENSCING00000024107	-	99	47.983	YOR335C	ALA1	99	47.983	Saccharomyces_cerevisiae
ENSCING00000024107	-	99	59.217	ENSSBOG00000022141	AARS	99	67.600	Saimiri_boliviensis_boliviensis
ENSCING00000024107	-	99	59.381	ENSSHAG00000007347	AARS	99	59.381	Sarcophilus_harrisii
ENSCING00000024107	-	99	58.368	ENSSFOG00015013147	aars	99	58.368	Scleropages_formosus
ENSCING00000024107	-	99	58.927	ENSSFOG00015011897	AARS	99	58.927	Scleropages_formosus
ENSCING00000024107	-	99	58.660	ENSSMAG00000014488	aars	99	58.660	Scophthalmus_maximus
ENSCING00000024107	-	99	58.660	ENSSDUG00000021127	aars	99	58.660	Seriola_dumerili
ENSCING00000024107	-	99	58.969	ENSSLDG00000017716	aars	99	58.969	Seriola_lalandi_dorsalis
ENSCING00000024107	-	51	70.803	ENSSARG00000006382	-	69	70.803	Sorex_araneus
ENSCING00000024107	-	99	58.866	ENSSPUG00000001911	AARS	99	58.866	Sphenodon_punctatus
ENSCING00000024107	-	99	59.485	ENSSPAG00000001290	aars	99	59.485	Stegastes_partitus
ENSCING00000024107	-	96	35.011	ENSSSCG00000040225	-	99	35.011	Sus_scrofa
ENSCING00000024107	-	99	58.557	ENSSSCG00000002723	-	99	58.557	Sus_scrofa
ENSCING00000024107	-	99	59.175	ENSTGUG00000005683	AARS	99	59.175	Taeniopygia_guttata
ENSCING00000024107	-	90	60.182	ENSTRUG00000000907	aars	99	66.393	Takifugu_rubripes
ENSCING00000024107	-	99	58.805	ENSTNIG00000004016	aars	99	58.805	Tetraodon_nigroviridis
ENSCING00000024107	-	94	43.948	ENSTBEG00000017122	-	99	43.948	Tupaia_belangeri
ENSCING00000024107	-	99	59.732	ENSUAMG00000007008	AARS	99	59.732	Ursus_americanus
ENSCING00000024107	-	99	59.835	ENSUMAG00000016975	AARS	99	59.835	Ursus_maritimus
ENSCING00000024107	-	75	64.948	ENSVPAG00000003189	AARS	78	64.948	Vicugna_pacos
ENSCING00000024107	-	99	59.320	ENSVVUG00000018036	AARS	99	59.320	Vulpes_vulpes
ENSCING00000024107	-	100	59.423	ENSXETG00000007668	aars	99	59.423	Xenopus_tropicalis
ENSCING00000024107	-	99	59.526	ENSXCOG00000013625	aars	99	59.526	Xiphophorus_couchianus
ENSCING00000024107	-	99	59.526	ENSXMAG00000006282	aars	99	59.526	Xiphophorus_maculatus