EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024328 (Gene tree)
Gene ID: 100185668
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2370 bases
Position: chr9:307762-310131
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032256	FtsJ	PF01728.19	4.3e-37	1	1
ENSCINP00000032256	G-patch	PF01585.23	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031688	-	2370	-	ENSCINP00000032256	790 (aa)	-	H2XRH2

Gene Model

Click here to download ENSCING00000024328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024328	-	99	49.685	ENSG00000137200	CMTR1	89	51.200	Homo_sapiens
ENSCING00000024328	-	95	48.677	ENSAPOG00000006151	cmtr1	97	48.677	Acanthochromis_polyacanthus
ENSCING00000024328	-	99	48.768	ENSAMEG00000015322	CMTR1	84	50.262	Ailuropoda_melanoleuca
ENSCING00000024328	-	94	48.877	ENSACIG00000005878	cmtr1	81	48.748	Amphilophus_citrinellus
ENSCING00000024328	-	80	51.166	ENSAOCG00000010042	cmtr1	80	51.166	Amphiprion_ocellaris
ENSCING00000024328	-	95	48.813	ENSAPEG00000005034	cmtr1	91	48.813	Amphiprion_percula
ENSCING00000024328	-	98	48.276	ENSATEG00000010704	cmtr1	95	49.534	Anabas_testudineus
ENSCING00000024328	-	94	50.928	ENSAPLG00000014262	CMTR1	90	50.928	Anas_platyrhynchos
ENSCING00000024328	-	94	51.459	ENSACAG00000014369	CMTR1	90	51.459	Anolis_carolinensis
ENSCING00000024328	-	99	49.686	ENSANAG00000020879	CMTR1	89	51.402	Aotus_nancymaae
ENSCING00000024328	-	94	49.399	ENSACLG00000015901	cmtr1	90	49.399	Astatotilapia_calliptera
ENSCING00000024328	-	99	39.823	ENSAMXG00000012891	cmtr1	90	40.721	Astyanax_mexicanus
ENSCING00000024328	-	99	48.936	ENSBTAG00000017091	CMTR1	89	50.599	Bos_taurus
ENSCING00000024328	-	86	34.966	WBGene00013160	Y53F4B.13	80	42.500	Caenorhabditis_elegans
ENSCING00000024328	-	99	49.686	ENSCJAG00000005567	CMTR1	89	51.402	Callithrix_jacchus
ENSCING00000024328	-	99	49.437	ENSCAFG00000001477	CMTR1	89	51.132	Canis_familiaris
ENSCING00000024328	-	99	49.437	ENSCAFG00020007413	CMTR1	89	61.602	Canis_lupus_dingo
ENSCING00000024328	-	99	49.186	ENSCHIG00000024476	CMTR1	89	50.866	Capra_hircus
ENSCING00000024328	-	99	47.930	ENSTSYG00000001508	CMTR1	89	49.800	Carlito_syrichta
ENSCING00000024328	-	100	49.134	ENSCAPG00000009501	CMTR1	90	50.796	Cavia_aperea
ENSCING00000024328	-	99	49.193	ENSCPOG00000010298	CMTR1	89	50.866	Cavia_porcellus
ENSCING00000024328	-	98	49.364	ENSCCAG00000033509	CMTR1	99	51.289	Cebus_capucinus
ENSCING00000024328	-	99	49.685	ENSCATG00000043987	CMTR1	89	51.200	Cercocebus_atys
ENSCING00000024328	-	99	50.063	ENSCLAG00000012181	CMTR1	89	51.268	Chinchilla_lanigera
ENSCING00000024328	-	99	49.685	ENSCSAG00000010493	CMTR1	89	51.200	Chlorocebus_sabaeus
ENSCING00000024328	-	85	48.609	ENSCHOG00000004736	CMTR1	88	50.709	Choloepus_hoffmanni
ENSCING00000024328	-	94	51.989	ENSCPBG00000025335	CMTR1	94	51.013	Chrysemys_picta_bellii
ENSCING00000024328	-	99	49.685	ENSCANG00000019286	CMTR1	89	51.200	Colobus_angolensis_palliatus
ENSCING00000024328	-	99	49.377	ENSCGRG00001022818	Cmtr1	90	50.531	Cricetulus_griseus_chok1gshd
ENSCING00000024328	-	99	49.377	ENSCGRG00000014364	Cmtr1	90	50.531	Cricetulus_griseus_crigri
ENSCING00000024328	-	99	48.485	ENSCSEG00000020697	cmtr1	94	49.030	Cynoglossus_semilaevis
ENSCING00000024328	-	95	50.397	ENSCVAG00000021132	cmtr1	91	50.397	Cyprinodon_variegatus
ENSCING00000024328	-	99	49.052	ENSDARG00000030830	cmtr1	91	50.132	Danio_rerio
ENSCING00000024328	-	99	49.061	ENSDNOG00000048634	CMTR1	92	50.866	Dasypus_novemcinctus
ENSCING00000024328	-	97	49.742	ENSDORG00000005445	Cmtr1	93	50.269	Dipodomys_ordii
ENSCING00000024328	-	94	38.540	FBgn0029693	CG6379	97	38.540	Drosophila_melanogaster
ENSCING00000024328	-	92	51.146	ENSETEG00000003670	CMTR1	82	51.146	Echinops_telfairi
ENSCING00000024328	-	95	47.575	ENSEBUG00000007471	cmtr1	90	47.575	Eptatretus_burgeri
ENSCING00000024328	-	99	49.312	ENSEASG00005021434	CMTR1	89	50.999	Equus_asinus_asinus
ENSCING00000024328	-	99	49.312	ENSECAG00000014822	CMTR1	89	61.602	Equus_caballus
ENSCING00000024328	-	82	50.533	ENSEEUG00000008073	CMTR1	78	50.533	Erinaceus_europaeus
ENSCING00000024328	-	99	47.914	ENSELUG00000004404	cmtr1	94	49.467	Esox_lucius
ENSCING00000024328	-	99	49.499	ENSFCAG00000006744	CMTR1	88	61.602	Felis_catus
ENSCING00000024328	-	94	51.194	ENSFALG00000011244	CMTR1	94	50.127	Ficedula_albicollis
ENSCING00000024328	-	99	49.496	ENSFDAG00000013513	CMTR1	89	50.734	Fukomys_damarensis
ENSCING00000024328	-	95	49.735	ENSFHEG00000001086	cmtr1	99	48.667	Fundulus_heteroclitus
ENSCING00000024328	-	94	48.865	ENSGMOG00000014482	cmtr1	90	48.800	Gadus_morhua
ENSCING00000024328	-	94	52.122	ENSGALG00000010149	CMTR1	80	52.122	Gallus_gallus
ENSCING00000024328	-	99	48.557	ENSGAFG00000010629	cmtr1	90	50.133	Gambusia_affinis
ENSCING00000024328	-	94	49.933	ENSGACG00000011365	cmtr1	90	49.933	Gasterosteus_aculeatus
ENSCING00000024328	-	94	52.520	ENSGAGG00000023136	CMTR1	94	51.519	Gopherus_agassizii
ENSCING00000024328	-	99	49.685	ENSGGOG00000005640	CMTR1	89	51.200	Gorilla_gorilla
ENSCING00000024328	-	94	49.399	ENSHBUG00000010146	cmtr1	90	49.399	Haplochromis_burtoni
ENSCING00000024328	-	99	49.747	ENSHGLG00000019562	CMTR1	89	50.732	Heterocephalus_glaber_female
ENSCING00000024328	-	99	49.367	ENSHGLG00100009312	CMTR1	89	50.868	Heterocephalus_glaber_male
ENSCING00000024328	-	94	50.133	ENSHCOG00000011866	cmtr1	96	48.541	Hippocampus_comes
ENSCING00000024328	-	94	49.069	ENSIPUG00000012160	cmtr1	89	49.200	Ictalurus_punctatus
ENSCING00000024328	-	94	50.667	ENSSTOG00000016546	CMTR1	89	50.667	Ictidomys_tridecemlineatus
ENSCING00000024328	-	99	49.310	ENSJJAG00000018982	Cmtr1	89	51.067	Jaculus_jaculus
ENSCING00000024328	-	94	49.535	ENSKMAG00000011344	cmtr1	90	49.667	Kryptolebias_marmoratus
ENSCING00000024328	-	94	50.266	ENSLBEG00000021019	cmtr1	93	50.266	Labrus_bergylta
ENSCING00000024328	-	93	49.191	ENSLACG00000006958	CMTR1	99	48.579	Latimeria_chalumnae
ENSCING00000024328	-	94	46.328	ENSLOCG00000017052	cmtr1	99	46.328	Lepisosteus_oculatus
ENSCING00000024328	-	99	49.499	ENSLAFG00000017287	CMTR1	90	51.200	Loxodonta_africana
ENSCING00000024328	-	99	49.685	ENSMFAG00000002390	CMTR1	89	51.200	Macaca_fascicularis
ENSCING00000024328	-	99	49.685	ENSMMUG00000011573	CMTR1	98	51.150	Macaca_mulatta
ENSCING00000024328	-	99	49.685	ENSMNEG00000039572	CMTR1	89	51.200	Macaca_nemestrina
ENSCING00000024328	-	99	49.049	ENSMLEG00000037397	CMTR1	89	50.667	Mandrillus_leucophaeus
ENSCING00000024328	-	99	48.232	ENSMAMG00000020706	cmtr1	93	48.771	Mastacembelus_armatus
ENSCING00000024328	-	94	49.399	ENSMZEG00005017018	cmtr1	90	49.399	Maylandia_zebra
ENSCING00000024328	-	94	51.989	ENSMGAG00000010739	CMTR1	90	51.989	Meleagris_gallopavo
ENSCING00000024328	-	99	49.625	ENSMICG00000003366	CMTR1	89	51.330	Microcebus_murinus
ENSCING00000024328	-	99	45.636	ENSMOCG00000014109	Cmtr1	89	47.215	Microtus_ochrogaster
ENSCING00000024328	-	94	47.278	ENSMMOG00000015984	cmtr1	93	47.278	Mola_mola
ENSCING00000024328	-	95	48.481	ENSMALG00000003836	cmtr1	91	48.481	Monopterus_albus
ENSCING00000024328	-	99	49.002	MGP_CAROLIEiJ_G0021350	Cmtr1	94	49.241	Mus_caroli
ENSCING00000024328	-	99	48.878	ENSMUSG00000024019	Cmtr1	100	66.667	Mus_musculus
ENSCING00000024328	-	99	49.127	MGP_PahariEiJ_G0023669	Cmtr1	94	49.367	Mus_pahari
ENSCING00000024328	-	99	48.753	MGP_SPRETEiJ_G0022264	Cmtr1	90	50.265	Mus_spretus
ENSCING00000024328	-	99	49.437	ENSMPUG00000013910	CMTR1	89	51.132	Mustela_putorius_furo
ENSCING00000024328	-	99	49.370	ENSMLUG00000006730	-	90	50.933	Myotis_lucifugus
ENSCING00000024328	-	99	47.799	ENSMLUG00000024254	-	90	49.268	Myotis_lucifugus
ENSCING00000024328	-	99	49.434	ENSNGAG00000010259	Cmtr1	93	49.809	Nannospalax_galili
ENSCING00000024328	-	94	49.533	ENSNBRG00000017272	cmtr1	95	49.533	Neolamprologus_brichardi
ENSCING00000024328	-	99	49.559	ENSNLEG00000011192	CMTR1	99	51.067	Nomascus_leucogenys
ENSCING00000024328	-	80	63.202	ENSMEUG00000008971	CMTR1	79	59.694	Notamacropus_eugenii
ENSCING00000024328	-	99	49.874	ENSOPRG00000012930	CMTR1	89	51.200	Ochotona_princeps
ENSCING00000024328	-	99	49.434	ENSODEG00000017441	CMTR1	89	50.734	Octodon_degus
ENSCING00000024328	-	94	49.933	ENSONIG00000013469	cmtr1	90	49.933	Oreochromis_niloticus
ENSCING00000024328	-	89	48.544	ENSOANG00000013822	CMTR1	94	47.292	Ornithorhynchus_anatinus
ENSCING00000024328	-	84	52.679	ENSOCUG00000008098	CMTR1	84	52.679	Oryctolagus_cuniculus
ENSCING00000024328	-	98	48.496	ENSORLG00000013819	cmtr1	94	49.093	Oryzias_latipes
ENSCING00000024328	-	98	48.496	ENSORLG00020012086	cmtr1	94	49.093	Oryzias_latipes_hni
ENSCING00000024328	-	98	48.496	ENSORLG00015006909	cmtr1	94	49.093	Oryzias_latipes_hsok
ENSCING00000024328	-	98	48.306	ENSOMEG00000008016	cmtr1	94	49.093	Oryzias_melastigma
ENSCING00000024328	-	94	50.798	ENSOGAG00000000916	CMTR1	89	50.798	Otolemur_garnettii
ENSCING00000024328	-	99	49.186	ENSOARG00000014698	CMTR1	89	50.866	Ovis_aries
ENSCING00000024328	-	99	49.685	ENSPPAG00000035778	CMTR1	89	51.200	Pan_paniscus
ENSCING00000024328	-	99	49.499	ENSPPRG00000022660	CMTR1	89	51.200	Panthera_pardus
ENSCING00000024328	-	99	49.499	ENSPTIG00000020536	CMTR1	89	51.200	Panthera_tigris_altaica
ENSCING00000024328	-	99	49.685	ENSPTRG00000018122	CMTR1	89	51.200	Pan_troglodytes
ENSCING00000024328	-	99	49.685	ENSPANG00000021276	CMTR1	89	51.200	Papio_anubis
ENSCING00000024328	-	97	50.065	ENSPKIG00000005638	cmtr1	93	50.065	Paramormyrops_kingsleyae
ENSCING00000024328	-	94	51.592	ENSPSIG00000018204	CMTR1	94	50.380	Pelodiscus_sinensis
ENSCING00000024328	-	94	47.889	ENSPMGG00000008947	cmtr1	96	47.889	Periophthalmus_magnuspinnatus
ENSCING00000024328	-	99	49.002	ENSPEMG00000006218	Cmtr1	92	49.362	Peromyscus_maniculatus_bairdii
ENSCING00000024328	-	94	49.735	ENSPMAG00000005418	cmtr1	97	48.840	Petromyzon_marinus
ENSCING00000024328	-	94	51.867	ENSPCIG00000024459	CMTR1	93	50.636	Phascolarctos_cinereus
ENSCING00000024328	-	99	48.363	ENSPFOG00000001587	cmtr1	90	49.933	Poecilia_formosa
ENSCING00000024328	-	99	48.363	ENSPLAG00000015883	cmtr1	90	49.933	Poecilia_latipinna
ENSCING00000024328	-	99	48.363	ENSPMEG00000014227	cmtr1	90	49.933	Poecilia_mexicana
ENSCING00000024328	-	99	48.866	ENSPREG00000001500	cmtr1	90	50.467	Poecilia_reticulata
ENSCING00000024328	-	99	49.685	ENSPPYG00000016562	CMTR1	89	51.200	Pongo_abelii
ENSCING00000024328	-	90	51.940	ENSPCAG00000016015	CMTR1	81	55.263	Procavia_capensis
ENSCING00000024328	-	99	48.125	ENSPCOG00000022141	CMTR1	97	49.663	Propithecus_coquereli
ENSCING00000024328	-	99	47.302	ENSPVAG00000016511	CMTR1	89	49.134	Pteropus_vampyrus
ENSCING00000024328	-	94	49.533	ENSPNYG00000009903	cmtr1	90	49.533	Pundamilia_nyererei
ENSCING00000024328	-	99	44.444	ENSPNAG00000028223	cmtr1	85	45.806	Pygocentrus_nattereri
ENSCING00000024328	-	99	49.125	ENSRNOG00000000532	Cmtr1	94	49.367	Rattus_norvegicus
ENSCING00000024328	-	99	49.685	ENSRBIG00000027057	CMTR1	89	51.200	Rhinopithecus_bieti
ENSCING00000024328	-	99	49.685	ENSRROG00000025840	CMTR1	89	51.200	Rhinopithecus_roxellana
ENSCING00000024328	-	99	49.686	ENSSBOG00000031128	CMTR1	89	51.402	Saimiri_boliviensis_boliviensis
ENSCING00000024328	-	94	51.398	ENSSHAG00000015917	CMTR1	93	50.191	Sarcophilus_harrisii
ENSCING00000024328	-	94	50.067	ENSSFOG00015016868	cmtr1	92	50.067	Scleropages_formosus
ENSCING00000024328	-	99	47.667	ENSSMAG00000014027	cmtr1	94	47.893	Scophthalmus_maximus
ENSCING00000024328	-	95	49.208	ENSSDUG00000016830	cmtr1	91	49.208	Seriola_dumerili
ENSCING00000024328	-	95	49.208	ENSSLDG00000006047	cmtr1	96	48.677	Seriola_lalandi_dorsalis
ENSCING00000024328	-	99	47.163	ENSSARG00000005374	CMTR1	94	48.667	Sorex_araneus
ENSCING00000024328	-	98	48.597	ENSSPUG00000017427	CMTR1	99	48.597	Sphenodon_punctatus
ENSCING00000024328	-	94	49.800	ENSSPAG00000007506	cmtr1	91	49.340	Stegastes_partitus
ENSCING00000024328	-	91	48.165	ENSSSCG00000001579	CMTR1	88	55.882	Sus_scrofa
ENSCING00000024328	-	94	51.724	ENSTGUG00000007924	CMTR1	94	50.506	Taeniopygia_guttata
ENSCING00000024328	-	94	49.933	ENSTRUG00000014780	cmtr1	91	49.933	Takifugu_rubripes
ENSCING00000024328	-	60	57.620	ENSTNIG00000012235	cmtr1	89	55.467	Tetraodon_nigroviridis
ENSCING00000024328	-	76	59.813	ENSTBEG00000012457	CMTR1	73	59.813	Tupaia_belangeri
ENSCING00000024328	-	99	49.182	ENSTTRG00000002801	CMTR1	89	50.870	Tursiops_truncatus
ENSCING00000024328	-	99	49.687	ENSUAMG00000027934	CMTR1	89	51.265	Ursus_americanus
ENSCING00000024328	-	99	47.990	ENSUMAG00000009577	CMTR1	99	47.821	Ursus_maritimus
ENSCING00000024328	-	71	51.399	ENSVPAG00000003389	CMTR1	74	54.008	Vicugna_pacos
ENSCING00000024328	-	99	49.437	ENSVVUG00000026447	CMTR1	89	51.132	Vulpes_vulpes
ENSCING00000024328	-	86	49.710	ENSXETG00000009964	cmtr1	82	49.710	Xenopus_tropicalis
ENSCING00000024328	-	99	48.864	ENSXCOG00000004583	cmtr1	90	50.333	Xiphophorus_couchianus
ENSCING00000024328	-	99	48.737	ENSXMAG00000007486	cmtr1	90	50.334	Xiphophorus_maculatus