EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024379 (Gene tree)
Gene ID: 778939
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 972 bases
Position: chrHT000137.1:47867-48838
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034783	zf-C2H2	PF00096.26	2.1e-30	1	6
ENSCINP00000034783	zf-C2H2	PF00096.26	2.1e-30	2	6
ENSCINP00000034783	zf-C2H2	PF00096.26	2.1e-30	3	6
ENSCINP00000034783	zf-C2H2	PF00096.26	2.1e-30	4	6
ENSCINP00000034783	zf-C2H2	PF00096.26	2.1e-30	5	6
ENSCINP00000034783	zf-C2H2	PF00096.26	2.1e-30	6	6
ENSCINP00000034783	zf-met	PF12874.7	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032441	-	972	-	ENSCINP00000034783	323 (aa)	-	H2XYP9

Gene Model

Click here to download ENSCING00000024379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024379	-	80	31.061	ENSACIG00000011516	-	79	31.061	Amphilophus_citrinellus
ENSCING00000024379	-	89	43.671	ENSAPEG00000009826	-	92	45.455	Amphiprion_percula
ENSCING00000024379	-	80	32.456	ENSCSEG00000018571	-	54	32.456	Cynoglossus_semilaevis
ENSCING00000024379	-	83	47.541	ENSOPRG00000011038	ZNF771	92	46.457	Ochotona_princeps
ENSCING00000024379	-	78	49.558	ENSTBEG00000017192	ZNF771	66	49.558	Tupaia_belangeri
ENSCING00000024379	-	80	31.579	ENSXCOG00000003001	-	87	31.579	Xiphophorus_couchianus