EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024509 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1422 bases
Position: chr11:1901595-1903016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	1	7
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	2	7
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	3	7
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	4	7
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	5	7
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	6	7
ENSCINP00000034189	zf-C2H2	PF00096.26	3.9e-36	7	7
ENSCINP00000034189	zf-met	PF12874.7	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034431	-	948	-	ENSCINP00000034189	316 (aa)	-	H2XX05

Gene Model

Click here to download ENSCING00000024509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024509	-	99	42.798	ENSG00000198482	ZNF808	82	42.798	Homo_sapiens
ENSCING00000024509	-	97	40.590	ENSAMEG00000014454	-	100	40.590	Ailuropoda_melanoleuca
ENSCING00000024509	-	91	41.892	ENSACIG00000015429	-	80	41.892	Amphilophus_citrinellus
ENSCING00000024509	-	95	40.397	ENSACAG00000029487	-	79	40.397	Anolis_carolinensis
ENSCING00000024509	-	96	40.397	ENSACAG00000013039	-	100	40.397	Anolis_carolinensis
ENSCING00000024509	-	95	44.371	ENSACAG00000025611	-	68	44.371	Anolis_carolinensis
ENSCING00000024509	-	95	42.105	ENSACLG00000017576	-	88	42.063	Astatotilapia_calliptera
ENSCING00000024509	-	99	41.709	ENSACLG00000019318	-	98	39.831	Astatotilapia_calliptera
ENSCING00000024509	-	91	40.486	ENSAMXG00000018161	-	95	40.486	Astyanax_mexicanus
ENSCING00000024509	-	96	37.218	ENSAMXG00000038280	-	88	37.218	Astyanax_mexicanus
ENSCING00000024509	-	90	37.634	ENSAMXG00000042938	-	91	37.634	Astyanax_mexicanus
ENSCING00000024509	-	91	37.884	ENSAMXG00000012604	-	97	37.884	Astyanax_mexicanus
ENSCING00000024509	-	85	42.056	ENSAMXG00000041861	-	84	42.056	Astyanax_mexicanus
ENSCING00000024509	-	99	40.873	ENSAMXG00000033500	-	94	40.873	Astyanax_mexicanus
ENSCING00000024509	-	91	39.459	ENSAMXG00000041721	-	75	39.459	Astyanax_mexicanus
ENSCING00000024509	-	95	42.197	ENSAMXG00000025965	-	95	42.197	Astyanax_mexicanus
ENSCING00000024509	-	95	41.199	ENSAMXG00000029828	-	95	41.199	Astyanax_mexicanus
ENSCING00000024509	-	97	40.102	ENSAMXG00000009563	-	93	36.634	Astyanax_mexicanus
ENSCING00000024509	-	95	41.040	ENSAMXG00000036762	-	96	41.040	Astyanax_mexicanus
ENSCING00000024509	-	94	44.526	ENSAMXG00000030530	-	99	36.268	Astyanax_mexicanus
ENSCING00000024509	-	95	37.993	ENSAMXG00000031900	-	95	37.993	Astyanax_mexicanus
ENSCING00000024509	-	95	43.182	ENSAMXG00000037717	-	95	43.182	Astyanax_mexicanus
ENSCING00000024509	-	95	40.726	ENSAMXG00000031496	-	91	40.726	Astyanax_mexicanus
ENSCING00000024509	-	97	42.623	ENSBTAG00000030470	-	73	42.623	Bos_taurus
ENSCING00000024509	-	93	41.445	ENSBTAG00000050322	-	74	41.445	Bos_taurus
ENSCING00000024509	-	99	43.173	ENSCHIG00000020931	-	81	43.173	Capra_hircus
ENSCING00000024509	-	97	40.000	ENSCATG00000036940	ZNF808	78	40.210	Cercocebus_atys
ENSCING00000024509	-	97	40.074	ENSCSAG00000001974	ZNF808	82	40.559	Chlorocebus_sabaeus
ENSCING00000024509	-	95	40.154	ENSCPBG00000015500	-	90	41.530	Chrysemys_picta_bellii
ENSCING00000024509	-	95	41.558	ENSCPBG00000003774	-	89	41.558	Chrysemys_picta_bellii
ENSCING00000024509	-	99	40.784	ENSCPBG00000003130	-	98	39.516	Chrysemys_picta_bellii
ENSCING00000024509	-	98	37.700	ENSCPBG00000017489	-	95	37.748	Chrysemys_picta_bellii
ENSCING00000024509	-	90	51.656	ENSCSAVG00000000642	-	100	51.656	Ciona_savignyi
ENSCING00000024509	-	90	45.763	ENSCSAVG00000000649	-	99	45.763	Ciona_savignyi
ENSCING00000024509	-	94	42.697	ENSCSAVG00000009583	-	100	42.324	Ciona_savignyi
ENSCING00000024509	-	95	44.130	ENSCANG00000019002	ZNF808	77	44.130	Colobus_angolensis_palliatus
ENSCING00000024509	-	97	40.161	ENSCGRG00001011966	Zfp715	71	40.161	Cricetulus_griseus_chok1gshd
ENSCING00000024509	-	96	40.625	ENSCGRG00001012523	-	89	40.625	Cricetulus_griseus_chok1gshd
ENSCING00000024509	-	97	40.161	ENSCGRG00000013626	Zfp715	68	40.161	Cricetulus_griseus_crigri
ENSCING00000024509	-	95	40.559	ENSEBUG00000006249	-	85	42.308	Eptatretus_burgeri
ENSCING00000024509	-	97	39.649	ENSEBUG00000014597	-	86	39.649	Eptatretus_burgeri
ENSCING00000024509	-	93	36.531	ENSEBUG00000003078	-	70	36.940	Eptatretus_burgeri
ENSCING00000024509	-	94	45.022	ENSEBUG00000006987	-	96	45.022	Eptatretus_burgeri
ENSCING00000024509	-	93	46.061	ENSEBUG00000010472	-	77	42.804	Eptatretus_burgeri
ENSCING00000024509	-	95	46.023	ENSEBUG00000008903	-	68	46.023	Eptatretus_burgeri
ENSCING00000024509	-	95	42.509	ENSEBUG00000001972	-	85	42.509	Eptatretus_burgeri
ENSCING00000024509	-	95	41.237	ENSEBUG00000005703	-	85	41.237	Eptatretus_burgeri
ENSCING00000024509	-	95	38.288	ENSEBUG00000014542	-	88	38.288	Eptatretus_burgeri
ENSCING00000024509	-	99	42.857	ENSEBUG00000003455	-	76	42.857	Eptatretus_burgeri
ENSCING00000024509	-	94	48.677	ENSEBUG00000009909	-	81	48.677	Eptatretus_burgeri
ENSCING00000024509	-	95	41.870	ENSEBUG00000014648	-	76	41.870	Eptatretus_burgeri
ENSCING00000024509	-	90	41.475	ENSEBUG00000005012	-	60	41.475	Eptatretus_burgeri
ENSCING00000024509	-	91	37.193	ENSEBUG00000006129	-	79	37.193	Eptatretus_burgeri
ENSCING00000024509	-	94	44.444	ENSGAFG00000017066	-	64	44.444	Gambusia_affinis
ENSCING00000024509	-	98	40.590	ENSGAGG00000006323	-	90	40.000	Gopherus_agassizii
ENSCING00000024509	-	91	41.048	ENSGAGG00000002828	-	68	41.048	Gopherus_agassizii
ENSCING00000024509	-	99	39.161	ENSGAGG00000014389	-	97	39.852	Gopherus_agassizii
ENSCING00000024509	-	98	40.891	ENSGAGG00000001469	-	93	40.891	Gopherus_agassizii
ENSCING00000024509	-	95	41.259	ENSGAGG00000017094	-	52	41.259	Gopherus_agassizii
ENSCING00000024509	-	99	43.033	ENSGGOG00000003352	ZNF808	76	43.033	Gorilla_gorilla
ENSCING00000024509	-	95	39.236	ENSHBUG00000001075	-	92	38.798	Haplochromis_burtoni
ENSCING00000024509	-	95	40.323	ENSLACG00000014708	-	64	40.323	Latimeria_chalumnae
ENSCING00000024509	-	97	40.000	ENSMFAG00000007422	ZNF808	79	40.210	Macaca_fascicularis
ENSCING00000024509	-	97	40.590	ENSMMUG00000012083	ZNF808	79	40.590	Macaca_mulatta
ENSCING00000024509	-	97	40.000	ENSMNEG00000043562	ZNF808	79	40.210	Macaca_nemestrina
ENSCING00000024509	-	95	40.727	ENSMLEG00000038043	ZNF808	68	40.727	Mandrillus_leucophaeus
ENSCING00000024509	-	95	43.030	ENSMZEG00005021865	-	87	40.588	Maylandia_zebra
ENSCING00000024509	-	95	41.494	ENSMZEG00005025012	-	99	41.494	Maylandia_zebra
ENSCING00000024509	-	95	42.640	ENSMICG00000042544	-	79	42.640	Microcebus_murinus
ENSCING00000024509	-	99	40.838	ENSMODG00000018622	-	99	40.838	Monodelphis_domestica
ENSCING00000024509	-	97	43.750	MGP_CAROLIEiJ_G0029490	Zfp420	98	43.750	Mus_caroli
ENSCING00000024509	-	99	42.365	MGP_CAROLIEiJ_G0029427	-	93	42.365	Mus_caroli
ENSCING00000024509	-	97	39.161	MGP_CAROLIEiJ_G0029614	Zfp715	67	39.161	Mus_caroli
ENSCING00000024509	-	99	41.026	MGP_CAROLIEiJ_G0021128	Zfp51	85	41.026	Mus_caroli
ENSCING00000024509	-	97	39.161	ENSMUSG00000012640	Zfp715	68	39.161	Mus_musculus
ENSCING00000024509	-	97	42.164	ENSMUSG00000058402	Zfp420	98	42.164	Mus_musculus
ENSCING00000024509	-	95	41.758	ENSMUSG00000023892	Zfp51	85	41.758	Mus_musculus
ENSCING00000024509	-	97	39.409	ENSMUSG00000070709	Zfp974	87	39.409	Mus_musculus
ENSCING00000024509	-	99	40.351	MGP_PahariEiJ_G0023447	Zfp51	82	40.351	Mus_pahari
ENSCING00000024509	-	97	42.537	MGP_PahariEiJ_G0012724	Zfp420	98	42.537	Mus_pahari
ENSCING00000024509	-	97	40.541	MGP_PahariEiJ_G0012663	-	75	40.541	Mus_pahari
ENSCING00000024509	-	97	42.164	MGP_SPRETEiJ_G0030586	Zfp420	98	42.164	Mus_spretus
ENSCING00000024509	-	97	39.161	MGP_SPRETEiJ_G0030713	Zfp715	68	39.161	Mus_spretus
ENSCING00000024509	-	97	42.365	MGP_SPRETEiJ_G0030526	-	85	42.365	Mus_spretus
ENSCING00000024509	-	99	38.224	MGP_SPRETEiJ_G0030525	-	81	38.224	Mus_spretus
ENSCING00000024509	-	95	39.130	ENSMLUG00000009276	-	86	39.130	Myotis_lucifugus
ENSCING00000024509	-	96	40.496	ENSMLUG00000015757	-	96	40.496	Myotis_lucifugus
ENSCING00000024509	-	99	41.975	ENSNLEG00000006042	ZNF808	76	41.975	Nomascus_leucogenys
ENSCING00000024509	-	92	39.362	ENSONIG00000016979	-	97	39.362	Oreochromis_niloticus
ENSCING00000024509	-	91	42.051	ENSONIG00000007396	-	99	38.621	Oreochromis_niloticus
ENSCING00000024509	-	91	42.972	ENSORLG00000011040	-	85	42.972	Oryzias_latipes
ENSCING00000024509	-	95	34.420	ENSOMEG00000018871	-	60	36.620	Oryzias_melastigma
ENSCING00000024509	-	96	37.652	ENSOMEG00000001622	-	85	36.986	Oryzias_melastigma
ENSCING00000024509	-	95	41.732	ENSOARG00000002896	-	80	41.754	Ovis_aries
ENSCING00000024509	-	99	43.033	ENSPPAG00000038086	ZNF808	76	43.033	Pan_paniscus
ENSCING00000024509	-	95	43.320	ENSPANG00000011361	ZNF808	75	43.320	Papio_anubis
ENSCING00000024509	-	95	40.889	ENSPSIG00000009603	-	99	40.889	Pelodiscus_sinensis
ENSCING00000024509	-	95	39.114	ENSPSIG00000008588	-	100	39.114	Pelodiscus_sinensis
ENSCING00000024509	-	95	41.319	ENSPEMG00000000548	-	90	41.319	Peromyscus_maniculatus_bairdii
ENSCING00000024509	-	96	41.958	ENSPCIG00000018929	-	94	42.411	Phascolarctos_cinereus
ENSCING00000024509	-	95	43.038	ENSPLAG00000014660	-	90	43.038	Poecilia_latipinna
ENSCING00000024509	-	94	40.385	ENSPREG00000008826	-	92	40.385	Poecilia_reticulata
ENSCING00000024509	-	99	43.852	ENSPPYG00000029644	ZNF808	76	43.852	Pongo_abelii
ENSCING00000024509	-	97	39.526	ENSPVAG00000009433	-	77	39.526	Pteropus_vampyrus
ENSCING00000024509	-	91	36.594	ENSPNAG00000002244	-	89	36.594	Pygocentrus_nattereri
ENSCING00000024509	-	95	38.889	ENSPNAG00000016478	-	98	38.889	Pygocentrus_nattereri
ENSCING00000024509	-	95	38.182	ENSPNAG00000006039	-	85	38.182	Pygocentrus_nattereri
ENSCING00000024509	-	99	38.112	ENSPNAG00000012495	-	81	38.112	Pygocentrus_nattereri
ENSCING00000024509	-	92	40.000	ENSPNAG00000021831	-	94	38.328	Pygocentrus_nattereri
ENSCING00000024509	-	86	39.216	ENSPNAG00000012154	-	87	39.216	Pygocentrus_nattereri
ENSCING00000024509	-	95	39.869	ENSPNAG00000005829	-	95	37.762	Pygocentrus_nattereri
ENSCING00000024509	-	96	42.810	ENSRNOG00000043341	Zfp51	85	42.810	Rattus_norvegicus
ENSCING00000024509	-	97	42.657	ENSRBIG00000032168	-	78	42.657	Rhinopithecus_bieti
ENSCING00000024509	-	97	44.130	ENSRROG00000009467	ZNF808	77	44.130	Rhinopithecus_roxellana
ENSCING00000024509	-	98	39.932	ENSSHAG00000003090	-	91	39.932	Sarcophilus_harrisii
ENSCING00000024509	-	92	37.989	ENSSLDG00000016301	-	91	37.989	Seriola_lalandi_dorsalis
ENSCING00000024509	-	97	38.732	ENSSPUG00000000136	-	98	38.819	Sphenodon_punctatus
ENSCING00000024509	-	97	39.928	ENSSPUG00000018867	-	88	39.928	Sphenodon_punctatus
ENSCING00000024509	-	97	39.852	ENSSPUG00000009764	-	60	39.852	Sphenodon_punctatus
ENSCING00000024509	-	97	39.044	ENSSPUG00000000229	-	91	39.044	Sphenodon_punctatus
ENSCING00000024509	-	97	40.530	ENSSPUG00000009898	-	91	40.530	Sphenodon_punctatus
ENSCING00000024509	-	96	40.244	ENSTGUG00000014079	-	100	40.244	Taeniopygia_guttata
ENSCING00000024509	-	96	38.550	ENSTNIG00000005023	-	100	42.520	Tetraodon_nigroviridis
ENSCING00000024509	-	91	33.663	ENSTNIG00000008100	-	100	37.500	Tetraodon_nigroviridis
ENSCING00000024509	-	91	39.431	ENSTBEG00000016262	-	100	39.024	Tupaia_belangeri
ENSCING00000024509	-	95	41.697	ENSUMAG00000024602	-	96	41.697	Ursus_maritimus
ENSCING00000024509	-	97	39.483	ENSXETG00000016781	-	99	39.483	Xenopus_tropicalis