EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6259 bases
Position: chr11:2591770-2598028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029832	PAP_RNA-bind	PF04926.15	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031667	-	1685	-	ENSCINP00000029832	536 (aa)	-	H2XJK0

Gene Model

Click here to download ENSCING00000024664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024664	-	94	64.752	ENSG00000115421	PAPOLG	100	69.231	Homo_sapiens
ENSCING00000024664	-	92	64.706	ENSAPOG00000004798	papolg	72	64.706	Acanthochromis_polyacanthus
ENSCING00000024664	-	90	65.844	ENSAMEG00000018227	PAPOLG	68	64.752	Ailuropoda_melanoleuca
ENSCING00000024664	-	92	64.300	ENSACIG00000010546	papolg	72	64.300	Amphilophus_citrinellus
ENSCING00000024664	-	92	64.503	ENSAOCG00000010254	papolg	59	64.503	Amphiprion_ocellaris
ENSCING00000024664	-	92	64.706	ENSAPEG00000006944	papolg	59	64.706	Amphiprion_percula
ENSCING00000024664	-	93	64.000	ENSATEG00000009007	papolg	79	64.000	Anabas_testudineus
ENSCING00000024664	-	99	58.748	ENSAPLG00000006813	PAPOLG	72	58.748	Anas_platyrhynchos
ENSCING00000024664	-	68	57.682	ENSACAG00000015048	-	61	57.682	Anolis_carolinensis
ENSCING00000024664	-	94	64.484	ENSANAG00000024627	PAPOLG	70	64.484	Aotus_nancymaae
ENSCING00000024664	-	92	64.097	ENSACLG00000015592	papolg	59	63.673	Astatotilapia_calliptera
ENSCING00000024664	-	94	63.960	ENSAMXG00000004611	papolg	67	63.960	Astyanax_mexicanus
ENSCING00000024664	-	94	64.752	ENSBTAG00000007414	PAPOLG	68	64.752	Bos_taurus
ENSCING00000024664	-	94	64.683	ENSCJAG00000009102	PAPOLG	68	64.683	Callithrix_jacchus
ENSCING00000024664	-	90	65.638	ENSCAFG00000002975	PAPOLG	62	64.554	Canis_familiaris
ENSCING00000024664	-	90	65.844	ENSCAFG00020026859	PAPOLG	72	64.752	Canis_lupus_dingo
ENSCING00000024664	-	94	64.752	ENSCHIG00000015082	PAPOLG	68	64.752	Capra_hircus
ENSCING00000024664	-	94	64.356	ENSTSYG00000004947	PAPOLG	67	64.356	Carlito_syrichta
ENSCING00000024664	-	70	62.834	ENSCAPG00000014901	-	98	62.834	Cavia_aperea
ENSCING00000024664	-	94	64.752	ENSCPOG00000010306	PAPOLG	67	64.752	Cavia_porcellus
ENSCING00000024664	-	94	64.752	ENSCCAG00000026893	PAPOLG	70	64.752	Cebus_capucinus
ENSCING00000024664	-	77	65.116	ENSCATG00000044395	PAPOLG	65	65.116	Cercocebus_atys
ENSCING00000024664	-	94	64.752	ENSCLAG00000008603	PAPOLG	67	64.752	Chinchilla_lanigera
ENSCING00000024664	-	93	64.529	ENSCSAG00000014408	PAPOLG	67	64.671	Chlorocebus_sabaeus
ENSCING00000024664	-	81	65.904	ENSCHOG00000014028	PAPOLG	66	65.904	Choloepus_hoffmanni
ENSCING00000024664	-	93	90.964	ENSCSAVG00000009085	-	100	90.964	Ciona_savignyi
ENSCING00000024664	-	94	64.554	ENSCANG00000038120	PAPOLG	70	64.554	Colobus_angolensis_palliatus
ENSCING00000024664	-	93	64.072	ENSCGRG00001014951	Papolg	68	64.072	Cricetulus_griseus_chok1gshd
ENSCING00000024664	-	93	64.072	ENSCGRG00000005552	-	68	64.072	Cricetulus_griseus_crigri
ENSCING00000024664	-	92	64.300	ENSCSEG00000000771	papolg	70	64.300	Cynoglossus_semilaevis
ENSCING00000024664	-	94	63.261	ENSCVAG00000016602	papolg	91	63.261	Cyprinodon_variegatus
ENSCING00000024664	-	92	63.895	ENSDARG00000012141	papolg	66	63.895	Danio_rerio
ENSCING00000024664	-	94	62.897	ENSDNOG00000011326	PAPOLG	66	62.897	Dasypus_novemcinctus
ENSCING00000024664	-	76	68.719	ENSDORG00000016228	Papolg	94	68.719	Dipodomys_ordii
ENSCING00000024664	-	94	50.198	ENSETEG00000011815	PAPOLG	67	50.593	Echinops_telfairi
ENSCING00000024664	-	63	63.314	ENSEBUG00000004020	papolg	78	63.314	Eptatretus_burgeri
ENSCING00000024664	-	89	47.799	ENSEBUG00000005042	-	81	47.799	Eptatretus_burgeri
ENSCING00000024664	-	90	65.844	ENSEASG00005002038	PAPOLG	67	64.752	Equus_asinus_asinus
ENSCING00000024664	-	90	65.844	ENSECAG00000009859	PAPOLG	67	64.752	Equus_caballus
ENSCING00000024664	-	99	54.699	ENSEEUG00000006196	PAPOLG	71	54.699	Erinaceus_europaeus
ENSCING00000024664	-	92	64.503	ENSELUG00000014497	papolg	59	64.503	Esox_lucius
ENSCING00000024664	-	99	62.147	ENSFCAG00000026126	PAPOLG	71	62.147	Felis_catus
ENSCING00000024664	-	99	58.410	ENSFALG00000011079	PAPOLG	70	58.487	Ficedula_albicollis
ENSCING00000024664	-	94	64.752	ENSFDAG00000010662	PAPOLG	66	64.752	Fukomys_damarensis
ENSCING00000024664	-	91	63.618	ENSGMOG00000018772	papolg	74	63.618	Gadus_morhua
ENSCING00000024664	-	98	58.178	ENSGALG00000007853	PAPOLG	74	58.178	Gallus_gallus
ENSCING00000024664	-	92	64.097	ENSGAFG00000003263	papolg	58	64.097	Gambusia_affinis
ENSCING00000024664	-	91	64.228	ENSGACG00000002718	papolg	66	64.228	Gasterosteus_aculeatus
ENSCING00000024664	-	94	64.752	ENSGGOG00000006083	PAPOLG	70	64.752	Gorilla_gorilla
ENSCING00000024664	-	92	64.097	ENSHBUG00000004882	papolg	59	63.673	Haplochromis_burtoni
ENSCING00000024664	-	94	64.752	ENSHGLG00000019610	PAPOLG	68	64.752	Heterocephalus_glaber_female
ENSCING00000024664	-	94	64.752	ENSHGLG00100010429	PAPOLG	68	64.752	Heterocephalus_glaber_male
ENSCING00000024664	-	92	64.097	ENSHCOG00000006782	papolg	60	64.097	Hippocampus_comes
ENSCING00000024664	-	93	63.727	ENSIPUG00000021642	papolg	70	63.727	Ictalurus_punctatus
ENSCING00000024664	-	93	64.870	ENSSTOG00000010861	PAPOLG	67	64.870	Ictidomys_tridecemlineatus
ENSCING00000024664	-	76	69.458	ENSJJAG00000015601	Papolg	94	69.458	Jaculus_jaculus
ENSCING00000024664	-	93	63.546	ENSKMAG00000016439	papolg	69	63.546	Kryptolebias_marmoratus
ENSCING00000024664	-	92	64.503	ENSLBEG00000023218	papolg	57	64.503	Labrus_bergylta
ENSCING00000024664	-	95	53.635	ENSLACG00000009543	PAPOLG	67	53.635	Latimeria_chalumnae
ENSCING00000024664	-	92	64.503	ENSLOCG00000016130	papolg	65	64.503	Lepisosteus_oculatus
ENSCING00000024664	-	94	64.752	ENSLAFG00000010404	PAPOLG	94	68.966	Loxodonta_africana
ENSCING00000024664	-	90	65.844	ENSMFAG00000042450	PAPOLG	68	64.752	Macaca_fascicularis
ENSCING00000024664	-	90	65.844	ENSMMUG00000000498	PAPOLG	68	64.752	Macaca_mulatta
ENSCING00000024664	-	90	58.045	ENSMNEG00000035939	PAPOLG	67	57.255	Macaca_nemestrina
ENSCING00000024664	-	90	65.844	ENSMLEG00000039462	PAPOLG	70	64.752	Mandrillus_leucophaeus
ENSCING00000024664	-	92	64.503	ENSMAMG00000010667	papolg	71	64.503	Mastacembelus_armatus
ENSCING00000024664	-	92	64.097	ENSMZEG00005018140	papolg	70	64.097	Maylandia_zebra
ENSCING00000024664	-	99	58.041	ENSMGAG00000001741	PAPOLG	72	58.041	Meleagris_gallopavo
ENSCING00000024664	-	94	64.554	ENSMAUG00000009088	Papolg	68	64.554	Mesocricetus_auratus
ENSCING00000024664	-	94	64.752	ENSMICG00000010042	PAPOLG	70	64.752	Microcebus_murinus
ENSCING00000024664	-	94	64.356	ENSMOCG00000006857	Papolg	68	64.356	Microtus_ochrogaster
ENSCING00000024664	-	92	63.895	ENSMMOG00000008020	papolg	81	61.569	Mola_mola
ENSCING00000024664	-	92	64.170	ENSMODG00000002160	PAPOLG	66	64.170	Monodelphis_domestica
ENSCING00000024664	-	92	64.300	ENSMALG00000007012	papolg	59	64.300	Monopterus_albus
ENSCING00000024664	-	94	64.554	MGP_CAROLIEiJ_G0016144	Papolg	94	68.719	Mus_caroli
ENSCING00000024664	-	94	64.554	ENSMUSG00000020273	Papolg	94	68.719	Mus_musculus
ENSCING00000024664	-	93	64.072	MGP_PahariEiJ_G0016746	Papolg	68	64.072	Mus_pahari
ENSCING00000024664	-	94	64.554	MGP_SPRETEiJ_G0016987	Papolg	94	68.719	Mus_spretus
ENSCING00000024664	-	90	65.638	ENSMPUG00000005165	PAPOLG	61	64.554	Mustela_putorius_furo
ENSCING00000024664	-	94	64.752	ENSMLUG00000009853	PAPOLG	68	64.752	Myotis_lucifugus
ENSCING00000024664	-	94	64.554	ENSNGAG00000001120	Papolg	68	64.554	Nannospalax_galili
ENSCING00000024664	-	92	56.478	ENSNBRG00000011943	papolg	64	56.478	Neolamprologus_brichardi
ENSCING00000024664	-	76	68.966	ENSNLEG00000009507	-	94	68.966	Nomascus_leucogenys
ENSCING00000024664	-	66	77.698	ENSMEUG00000013605	-	51	77.698	Notamacropus_eugenii
ENSCING00000024664	-	94	64.286	ENSOPRG00000009630	PAPOLG	67	64.286	Ochotona_princeps
ENSCING00000024664	-	76	65.764	ENSODEG00000012424	PAPOLG	95	65.764	Octodon_degus
ENSCING00000024664	-	92	57.287	ENSONIG00000002985	papolg	67	57.287	Oreochromis_niloticus
ENSCING00000024664	-	94	63.386	ENSOANG00000012403	PAPOLG	67	63.386	Ornithorhynchus_anatinus
ENSCING00000024664	-	94	64.683	ENSOCUG00000004962	PAPOLG	68	64.683	Oryctolagus_cuniculus
ENSCING00000024664	-	92	64.706	ENSORLG00000001577	papolg	59	64.706	Oryzias_latipes
ENSCING00000024664	-	92	64.503	ENSORLG00020002482	papolg	59	64.503	Oryzias_latipes_hni
ENSCING00000024664	-	92	64.503	ENSORLG00015008836	papolg	59	64.503	Oryzias_latipes_hsok
ENSCING00000024664	-	92	64.503	ENSOMEG00000001406	papolg	59	64.503	Oryzias_melastigma
ENSCING00000024664	-	97	62.734	ENSOARG00000001563	PAPOLG	65	62.734	Ovis_aries
ENSCING00000024664	-	94	64.752	ENSPPAG00000019917	PAPOLG	70	64.752	Pan_paniscus
ENSCING00000024664	-	94	64.752	ENSPPRG00000023250	PAPOLG	67	64.752	Panthera_pardus
ENSCING00000024664	-	94	64.554	ENSPTIG00000018126	PAPOLG	67	64.554	Panthera_tigris_altaica
ENSCING00000024664	-	94	64.752	ENSPTRG00000011948	PAPOLG	70	64.752	Pan_troglodytes
ENSCING00000024664	-	90	62.090	ENSPANG00000014543	PAPOLG	67	61.144	Papio_anubis
ENSCING00000024664	-	96	61.284	ENSPKIG00000003313	papolg	72	61.284	Paramormyrops_kingsleyae
ENSCING00000024664	-	92	64.300	ENSPKIG00000006027	PAPOLG	75	63.244	Paramormyrops_kingsleyae
ENSCING00000024664	-	99	60.332	ENSPSIG00000013663	PAPOLG	72	60.332	Pelodiscus_sinensis
ENSCING00000024664	-	94	64.356	ENSPEMG00000008960	-	74	61.183	Peromyscus_maniculatus_bairdii
ENSCING00000024664	-	93	51.456	ENSPMAG00000002961	papolg	67	52.390	Petromyzon_marinus
ENSCING00000024664	-	90	57.557	ENSPMAG00000004864	-	95	57.557	Petromyzon_marinus
ENSCING00000024664	-	93	63.928	ENSPCIG00000028094	PAPOLG	68	63.928	Phascolarctos_cinereus
ENSCING00000024664	-	92	64.097	ENSPFOG00000012909	papolg	65	64.097	Poecilia_formosa
ENSCING00000024664	-	92	64.097	ENSPLAG00000018445	papolg	58	64.097	Poecilia_latipinna
ENSCING00000024664	-	92	64.097	ENSPMEG00000003961	papolg	58	64.097	Poecilia_mexicana
ENSCING00000024664	-	92	64.097	ENSPREG00000010358	papolg	58	64.097	Poecilia_reticulata
ENSCING00000024664	-	94	64.752	ENSPPYG00000012392	PAPOLG	68	64.752	Pongo_abelii
ENSCING00000024664	-	88	64.496	ENSPCAG00000012297	PAPOLG	64	64.496	Procavia_capensis
ENSCING00000024664	-	99	58.801	ENSPCOG00000027306	PAPOLG	75	58.801	Propithecus_coquereli
ENSCING00000024664	-	94	63.294	ENSPVAG00000013541	PAPOLG	68	63.294	Pteropus_vampyrus
ENSCING00000024664	-	92	64.097	ENSPNYG00000006729	papolg	71	64.097	Pundamilia_nyererei
ENSCING00000024664	-	94	63.762	ENSPNAG00000015521	papolg	68	63.762	Pygocentrus_nattereri
ENSCING00000024664	-	94	64.752	ENSRNOG00000006261	Papolg	68	64.752	Rattus_norvegicus
ENSCING00000024664	-	94	59.406	ENSRBIG00000040086	PAPOLG	67	59.406	Rhinopithecus_bieti
ENSCING00000024664	-	94	64.752	ENSRROG00000035954	PAPOLG	70	64.752	Rhinopithecus_roxellana
ENSCING00000024664	-	90	65.844	ENSSBOG00000026194	PAPOLG	70	64.752	Saimiri_boliviensis_boliviensis
ENSCING00000024664	-	89	63.312	ENSSHAG00000014942	PAPOLG	67	63.312	Sarcophilus_harrisii
ENSCING00000024664	-	92	64.503	ENSSFOG00015002383	papolg	71	64.503	Scleropages_formosus
ENSCING00000024664	-	92	60.041	ENSSFOG00015011874	papolg	69	60.041	Scleropages_formosus
ENSCING00000024664	-	92	64.300	ENSSMAG00000015598	papolg	60	64.300	Scophthalmus_maximus
ENSCING00000024664	-	92	64.300	ENSSDUG00000000912	papolg	73	64.300	Seriola_dumerili
ENSCING00000024664	-	92	64.300	ENSSLDG00000001217	papolg	68	59.717	Seriola_lalandi_dorsalis
ENSCING00000024664	-	93	63.126	ENSSPUG00000007491	PAPOLG	68	63.126	Sphenodon_punctatus
ENSCING00000024664	-	92	64.706	ENSSPAG00000009004	papolg	72	64.706	Stegastes_partitus
ENSCING00000024664	-	94	64.752	ENSSSCG00000008389	PAPOLG	69	64.752	Sus_scrofa
ENSCING00000024664	-	99	57.593	ENSTGUG00000006762	PAPOLG	99	57.593	Taeniopygia_guttata
ENSCING00000024664	-	93	63.527	ENSTRUG00000006410	papolg	70	63.527	Takifugu_rubripes
ENSCING00000024664	-	94	58.366	ENSTNIG00000017106	papolg	69	58.366	Tetraodon_nigroviridis
ENSCING00000024664	-	94	59.208	ENSTBEG00000002609	PAPOLG	68	59.208	Tupaia_belangeri
ENSCING00000024664	-	90	61.443	ENSTTRG00000006237	PAPOLG	67	60.516	Tursiops_truncatus
ENSCING00000024664	-	90	65.844	ENSUAMG00000011088	PAPOLG	70	64.752	Ursus_americanus
ENSCING00000024664	-	90	65.844	ENSUMAG00000019081	PAPOLG	62	64.752	Ursus_maritimus
ENSCING00000024664	-	90	60.905	ENSVPAG00000000492	PAPOLG	68	60.000	Vicugna_pacos
ENSCING00000024664	-	90	65.844	ENSVVUG00000010344	PAPOLG	67	64.752	Vulpes_vulpes
ENSCING00000024664	-	90	64.523	ENSXETG00000002208	papolg	64	64.523	Xenopus_tropicalis
ENSCING00000024664	-	91	63.895	ENSXCOG00000006611	papolg	72	63.895	Xiphophorus_couchianus
ENSCING00000024664	-	91	62.753	ENSXMAG00000007383	papolg	81	62.753	Xiphophorus_maculatus