EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024695 (Gene tree)
Gene ID: 723803
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2765 bases
Position: chrHT000034.1:640551-643315
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003931	zf-U1	PF06220.12	9.4e-06	1	1
ENSCINP00000003931	zf-CCCH	PF00642.24	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003931	-	881	-	ENSCINP00000003931	162 (aa)	-	F6XU26

Gene Model

Click here to download ENSCING00000024695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024695	-	92	39.623	ENSG00000100319	ZMAT5	54	47.826	Homo_sapiens
ENSCING00000024695	-	57	46.739	ENSAPOG00000000944	zmat5	91	36.250	Acanthochromis_polyacanthus
ENSCING00000024695	-	100	37.222	ENSAMEG00000008059	ZMAT5	51	46.739	Ailuropoda_melanoleuca
ENSCING00000024695	-	73	42.105	ENSACIG00000015828	zmat5	91	38.750	Amphilophus_citrinellus
ENSCING00000024695	-	57	46.739	ENSAOCG00000003009	zmat5	52	46.739	Amphiprion_ocellaris
ENSCING00000024695	-	57	46.739	ENSAPEG00000011779	zmat5	52	46.739	Amphiprion_percula
ENSCING00000024695	-	58	44.681	ENSATEG00000020071	zmat5	69	40.164	Anabas_testudineus
ENSCING00000024695	-	90	33.735	ENSAPLG00000007232	ZMAT5	69	37.815	Anas_platyrhynchos
ENSCING00000024695	-	53	47.674	ENSACAG00000000796	ZMAT5	70	45.652	Anolis_carolinensis
ENSCING00000024695	-	92	39.623	ENSANAG00000032394	ZMAT5	54	47.826	Aotus_nancymaae
ENSCING00000024695	-	57	47.826	ENSAMXG00000006979	zmat5	89	37.908	Astyanax_mexicanus
ENSCING00000024695	-	92	39.623	ENSBTAG00000017890	ZMAT5	54	48.913	Bos_taurus
ENSCING00000024695	-	92	39.623	ENSCJAG00000021763	ZMAT5	54	47.826	Callithrix_jacchus
ENSCING00000024695	-	92	37.975	ENSCAFG00000012343	ZMAT5	54	46.739	Canis_familiaris
ENSCING00000024695	-	92	37.975	ENSCAFG00020000699	ZMAT5	54	46.739	Canis_lupus_dingo
ENSCING00000024695	-	92	35.185	ENSCHIG00000014766	ZMAT5	52	40.625	Capra_hircus
ENSCING00000024695	-	92	38.994	ENSTSYG00000032219	ZMAT5	54	47.826	Carlito_syrichta
ENSCING00000024695	-	92	39.241	ENSCPOG00000035759	ZMAT5	54	48.913	Cavia_porcellus
ENSCING00000024695	-	92	40.252	ENSCCAG00000027039	ZMAT5	54	48.913	Cebus_capucinus
ENSCING00000024695	-	92	39.623	ENSCATG00000041346	ZMAT5	54	47.826	Cercocebus_atys
ENSCING00000024695	-	92	39.241	ENSCLAG00000011728	ZMAT5	54	48.913	Chinchilla_lanigera
ENSCING00000024695	-	92	39.623	ENSCSAG00000009611	ZMAT5	54	47.826	Chlorocebus_sabaeus
ENSCING00000024695	-	92	37.821	ENSCPBG00000007737	ZMAT5	86	35.172	Chrysemys_picta_bellii
ENSCING00000024695	-	100	55.882	ENSCSAVG00000011080	-	90	56.579	Ciona_savignyi
ENSCING00000024695	-	92	39.623	ENSCANG00000027205	ZMAT5	54	47.826	Colobus_angolensis_palliatus
ENSCING00000024695	-	92	39.623	ENSCGRG00001006990	Zmat5	54	47.826	Cricetulus_griseus_chok1gshd
ENSCING00000024695	-	92	39.623	ENSCGRG00000013989	Zmat5	54	47.826	Cricetulus_griseus_crigri
ENSCING00000024695	-	83	35.135	ENSCSEG00000015698	zmat5	91	36.250	Cynoglossus_semilaevis
ENSCING00000024695	-	57	47.826	ENSCVAG00000021521	zmat5	53	47.826	Cyprinodon_variegatus
ENSCING00000024695	-	100	36.416	ENSDARG00000035434	zmat5	100	37.853	Danio_rerio
ENSCING00000024695	-	100	36.628	ENSDNOG00000000899	ZMAT5	54	47.826	Dasypus_novemcinctus
ENSCING00000024695	-	92	38.750	ENSDORG00000005655	Zmat5	54	47.826	Dipodomys_ordii
ENSCING00000024695	-	92	37.654	ENSETEG00000003789	ZMAT5	54	46.739	Echinops_telfairi
ENSCING00000024695	-	88	31.757	ENSEBUG00000015692	zmat5	67	31.655	Eptatretus_burgeri
ENSCING00000024695	-	92	38.994	ENSEASG00005010189	ZMAT5	54	47.826	Equus_asinus_asinus
ENSCING00000024695	-	92	38.994	ENSECAG00000017576	ZMAT5	54	47.826	Equus_caballus
ENSCING00000024695	-	92	37.107	ENSEEUG00000000936	ZMAT5	53	45.652	Erinaceus_europaeus
ENSCING00000024695	-	74	42.222	ENSELUG00000000943	zmat5	89	36.943	Esox_lucius
ENSCING00000024695	-	92	37.975	ENSFCAG00000004251	ZMAT5	54	46.739	Felis_catus
ENSCING00000024695	-	100	35.088	ENSFALG00000007011	ZMAT5	54	46.739	Ficedula_albicollis
ENSCING00000024695	-	92	38.994	ENSFDAG00000019792	ZMAT5	54	48.913	Fukomys_damarensis
ENSCING00000024695	-	57	50.000	ENSFHEG00000020879	zmat5	53	50.000	Fundulus_heteroclitus
ENSCING00000024695	-	57	41.304	ENSGMOG00000012163	zmat5	90	35.065	Gadus_morhua
ENSCING00000024695	-	90	35.484	ENSGALG00000008070	ZMAT5	84	42.857	Gallus_gallus
ENSCING00000024695	-	100	37.640	ENSGAFG00000009069	zmat5	91	37.267	Gambusia_affinis
ENSCING00000024695	-	73	36.842	ENSGACG00000016940	zmat5	90	35.220	Gasterosteus_aculeatus
ENSCING00000024695	-	92	37.179	ENSGAGG00000012370	ZMAT5	86	34.483	Gopherus_agassizii
ENSCING00000024695	-	92	39.623	ENSGGOG00000003792	ZMAT5	54	47.826	Gorilla_gorilla
ENSCING00000024695	-	100	38.547	ENSHBUG00000019402	zmat5	91	38.125	Haplochromis_burtoni
ENSCING00000024695	-	92	38.994	ENSHGLG00000018180	ZMAT5	54	48.913	Heterocephalus_glaber_female
ENSCING00000024695	-	92	38.365	ENSHGLG00100014927	ZMAT5	53	47.826	Heterocephalus_glaber_male
ENSCING00000024695	-	57	42.391	ENSHCOG00000001727	zmat5	53	42.391	Hippocampus_comes
ENSCING00000024695	-	90	36.242	ENSIPUG00000006633	zmat5	92	37.107	Ictalurus_punctatus
ENSCING00000024695	-	92	38.994	ENSSTOG00000005457	ZMAT5	54	47.826	Ictidomys_tridecemlineatus
ENSCING00000024695	-	57	45.652	ENSKMAG00000007209	zmat5	52	45.652	Kryptolebias_marmoratus
ENSCING00000024695	-	83	35.172	ENSLBEG00000017297	zmat5	84	36.620	Labrus_bergylta
ENSCING00000024695	-	85	35.065	ENSLACG00000001597	ZMAT5	86	35.065	Latimeria_chalumnae
ENSCING00000024695	-	100	37.143	ENSLOCG00000003675	zmat5	76	39.850	Lepisosteus_oculatus
ENSCING00000024695	-	92	36.306	ENSLAFG00000010823	ZMAT5	54	46.739	Loxodonta_africana
ENSCING00000024695	-	92	39.623	ENSMFAG00000040309	ZMAT5	54	47.826	Macaca_fascicularis
ENSCING00000024695	-	92	39.623	ENSMMUG00000040034	ZMAT5	54	47.826	Macaca_mulatta
ENSCING00000024695	-	92	39.623	ENSMNEG00000033419	ZMAT5	54	47.826	Macaca_nemestrina
ENSCING00000024695	-	92	39.623	ENSMLEG00000043289	ZMAT5	54	47.826	Mandrillus_leucophaeus
ENSCING00000024695	-	57	45.652	ENSMAMG00000011505	zmat5	53	45.652	Mastacembelus_armatus
ENSCING00000024695	-	73	40.602	ENSMZEG00005018406	zmat5	91	37.500	Maylandia_zebra
ENSCING00000024695	-	59	45.263	ENSMGAG00000009818	ZMAT5	74	45.263	Meleagris_gallopavo
ENSCING00000024695	-	92	39.241	ENSMAUG00000021576	Zmat5	54	47.826	Mesocricetus_auratus
ENSCING00000024695	-	57	47.826	ENSMICG00000027135	ZMAT5	54	47.826	Microcebus_murinus
ENSCING00000024695	-	100	37.791	ENSMOCG00000014203	Zmat5	54	47.826	Microtus_ochrogaster
ENSCING00000024695	-	83	37.162	ENSMMOG00000009336	zmat5	91	35.000	Mola_mola
ENSCING00000024695	-	100	31.548	ENSMODG00000009007	ZMAT5	86	31.034	Monodelphis_domestica
ENSCING00000024695	-	52	45.882	ENSMALG00000011581	zmat5	70	38.525	Monopterus_albus
ENSCING00000024695	-	100	38.372	ENSMUSG00000009076	Zmat5	54	48.913	Mus_musculus
ENSCING00000024695	-	92	37.037	ENSMPUG00000013253	ZMAT5	53	46.739	Mustela_putorius_furo
ENSCING00000024695	-	100	33.918	ENSMLUG00000017398	ZMAT5	54	42.391	Myotis_lucifugus
ENSCING00000024695	-	92	38.994	ENSNGAG00000019083	Zmat5	54	47.826	Nannospalax_galili
ENSCING00000024695	-	92	39.623	ENSNLEG00000003391	ZMAT5	54	47.826	Nomascus_leucogenys
ENSCING00000024695	-	92	38.608	ENSODEG00000017389	ZMAT5	54	48.913	Octodon_degus
ENSCING00000024695	-	57	46.739	ENSONIG00000013964	zmat5	91	37.888	Oreochromis_niloticus
ENSCING00000024695	-	92	38.365	ENSOCUG00000005282	ZMAT5	54	48.913	Oryctolagus_cuniculus
ENSCING00000024695	-	83	36.601	ENSORLG00000008131	zmat5	91	36.420	Oryzias_latipes
ENSCING00000024695	-	83	36.601	ENSORLG00020017564	zmat5	91	36.420	Oryzias_latipes_hni
ENSCING00000024695	-	83	36.601	ENSORLG00015004714	zmat5	91	36.420	Oryzias_latipes_hsok
ENSCING00000024695	-	73	41.176	ENSOMEG00000002536	zmat5	91	37.037	Oryzias_melastigma
ENSCING00000024695	-	92	36.709	ENSOGAG00000016378	ZMAT5	54	47.826	Otolemur_garnettii
ENSCING00000024695	-	92	38.125	ENSOARG00000005488	ZMAT5	53	50.000	Ovis_aries
ENSCING00000024695	-	92	39.623	ENSPPAG00000029148	ZMAT5	54	47.826	Pan_paniscus
ENSCING00000024695	-	92	37.975	ENSPPRG00000016453	ZMAT5	54	46.739	Panthera_pardus
ENSCING00000024695	-	92	37.975	ENSPTIG00000021188	ZMAT5	54	46.739	Panthera_tigris_altaica
ENSCING00000024695	-	92	39.623	ENSPTRG00000014229	ZMAT5	54	47.826	Pan_troglodytes
ENSCING00000024695	-	92	39.623	ENSPANG00000020624	ZMAT5	54	47.826	Papio_anubis
ENSCING00000024695	-	88	35.616	ENSPKIG00000023667	zmat5	75	37.121	Paramormyrops_kingsleyae
ENSCING00000024695	-	75	34.815	ENSPMGG00000016190	zmat5	89	33.987	Periophthalmus_magnuspinnatus
ENSCING00000024695	-	100	37.427	ENSPEMG00000007232	Zmat5	54	47.826	Peromyscus_maniculatus_bairdii
ENSCING00000024695	-	100	34.104	ENSPCIG00000026919	ZMAT5	86	34.228	Phascolarctos_cinereus
ENSCING00000024695	-	57	46.739	ENSPFOG00000019788	zmat5	53	46.739	Poecilia_formosa
ENSCING00000024695	-	57	46.739	ENSPLAG00000022833	zmat5	53	46.739	Poecilia_latipinna
ENSCING00000024695	-	57	46.739	ENSPMEG00000008885	zmat5	53	46.739	Poecilia_mexicana
ENSCING00000024695	-	57	46.739	ENSPREG00000012981	zmat5	89	37.736	Poecilia_reticulata
ENSCING00000024695	-	92	39.623	ENSPPYG00000011696	ZMAT5	54	47.826	Pongo_abelii
ENSCING00000024695	-	92	33.758	ENSPCAG00000009438	ZMAT5	53	45.556	Procavia_capensis
ENSCING00000024695	-	92	38.608	ENSPCOG00000020052	ZMAT5	54	47.826	Propithecus_coquereli
ENSCING00000024695	-	73	40.602	ENSPNYG00000008778	zmat5	91	37.500	Pundamilia_nyererei
ENSCING00000024695	-	100	36.517	ENSPNAG00000008209	zmat5	100	35.556	Pygocentrus_nattereri
ENSCING00000024695	-	100	38.372	ENSRNOG00000007849	Zmat5	54	48.913	Rattus_norvegicus
ENSCING00000024695	-	92	39.623	ENSRBIG00000018881	ZMAT5	54	47.826	Rhinopithecus_bieti
ENSCING00000024695	-	92	39.623	ENSRROG00000023979	ZMAT5	54	47.826	Rhinopithecus_roxellana
ENSCING00000024695	-	92	39.623	ENSSBOG00000016696	ZMAT5	54	47.826	Saimiri_boliviensis_boliviensis
ENSCING00000024695	-	100	33.908	ENSSFOG00015017242	zmat5	84	33.333	Scleropages_formosus
ENSCING00000024695	-	57	48.913	ENSSMAG00000001901	zmat5	91	39.375	Scophthalmus_maximus
ENSCING00000024695	-	57	46.739	ENSSDUG00000018849	zmat5	97	37.500	Seriola_dumerili
ENSCING00000024695	-	57	46.739	ENSSLDG00000012409	zmat5	95	37.500	Seriola_lalandi_dorsalis
ENSCING00000024695	-	100	31.395	ENSSARG00000013381	ZMAT5	53	40.217	Sorex_araneus
ENSCING00000024695	-	100	34.706	ENSSPUG00000018968	ZMAT5	86	32.877	Sphenodon_punctatus
ENSCING00000024695	-	55	44.944	ENSSPAG00000006369	zmat5	91	34.375	Stegastes_partitus
ENSCING00000024695	-	92	38.608	ENSSSCG00000024279	ZMAT5	54	48.913	Sus_scrofa
ENSCING00000024695	-	90	34.194	ENSTGUG00000010490	ZMAT5	54	45.652	Taeniopygia_guttata
ENSCING00000024695	-	100	31.667	ENSTRUG00000012501	zmat5	52	39.130	Takifugu_rubripes
ENSCING00000024695	-	74	38.333	ENSTNIG00000009066	zmat5	73	38.333	Tetraodon_nigroviridis
ENSCING00000024695	-	56	47.778	ENSTBEG00000012568	ZMAT5	53	47.778	Tupaia_belangeri
ENSCING00000024695	-	92	36.943	ENSTTRG00000000554	ZMAT5	54	48.913	Tursiops_truncatus
ENSCING00000024695	-	92	38.365	ENSUAMG00000015558	ZMAT5	54	46.739	Ursus_americanus
ENSCING00000024695	-	92	37.975	ENSVVUG00000003593	ZMAT5	54	46.739	Vulpes_vulpes
ENSCING00000024695	-	75	39.837	ENSXMAG00000001402	zmat5	91	35.404	Xiphophorus_maculatus