EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024718 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2257 bases
Position: chr5:3383599-3385855
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034568	RRM_1	PF00076.22	1.7e-31	1	2
ENSCINP00000034568	RRM_1	PF00076.22	1.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032767	-	1029	-	ENSCINP00000034568	342 (aa)	-	H2XY34

Gene Model

Click here to download ENSCING00000024718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024718	-	56	60.417	ENSG00000116350	SRSF4	78	44.410	Homo_sapiens
ENSCING00000024718	-	56	55.897	ENSAPOG00000023399	-	99	41.587	Acanthochromis_polyacanthus
ENSCING00000024718	-	56	56.477	ENSACIG00000018649	srsf4	81	64.179	Amphilophus_citrinellus
ENSCING00000024718	-	52	53.107	ENSAOCG00000005997	srsf4	91	54.749	Amphiprion_ocellaris
ENSCING00000024718	-	58	54.412	ENSATEG00000005680	srsf4	61	54.082	Anabas_testudineus
ENSCING00000024718	-	56	60.417	ENSANAG00000037134	SRSF4	83	43.681	Aotus_nancymaae
ENSCING00000024718	-	56	56.995	ENSACLG00000003395	srsf4	79	64.179	Astatotilapia_calliptera
ENSCING00000024718	-	56	58.031	ENSACLG00000021269	-	82	41.159	Astatotilapia_calliptera
ENSCING00000024718	-	57	56.410	ENSAMXG00000034811	srsf4	74	62.667	Astyanax_mexicanus
ENSCING00000024718	-	56	60.417	ENSBTAG00000013309	SRSF4	62	45.566	Bos_taurus
ENSCING00000024718	-	56	48.990	WBGene00004698	rsp-1	97	46.154	Caenorhabditis_elegans
ENSCING00000024718	-	71	51.119	ENSCHIG00000022096	SRSF4	61	43.582	Capra_hircus
ENSCING00000024718	-	56	60.417	ENSTSYG00000007903	SRSF4	65	45.797	Carlito_syrichta
ENSCING00000024718	-	57	63.131	ENSCING00000020631	-	80	61.735	Ciona_intestinalis
ENSCING00000024718	-	56	50.785	ENSCING00000011362	-	65	50.785	Ciona_intestinalis
ENSCING00000024718	-	58	65.238	ENSCING00000012370	-	68	64.878	Ciona_intestinalis
ENSCING00000024718	-	57	66.000	ENSCSAVG00000002581	-	98	53.459	Ciona_savignyi
ENSCING00000024718	-	56	56.995	ENSCSEG00000010058	srsf4	74	50.725	Cynoglossus_semilaevis
ENSCING00000024718	-	56	55.440	ENSDARG00000105293	srsf4	71	62.667	Danio_rerio
ENSCING00000024718	-	56	60.417	ENSDNOG00000047961	SRSF4	52	41.765	Dasypus_novemcinctus
ENSCING00000024718	-	57	62.051	FBgn0004587	B52	97	50.331	Drosophila_melanogaster
ENSCING00000024718	-	52	45.506	ENSEBUG00000003129	srsf4	68	43.094	Eptatretus_burgeri
ENSCING00000024718	-	67	45.259	ENSEBUG00000001681	srsf4	66	46.269	Eptatretus_burgeri
ENSCING00000024718	-	56	50.485	ENSELUG00000017551	srsf4	93	48.936	Esox_lucius
ENSCING00000024718	-	56	60.417	ENSFALG00000001346	SRSF4	66	43.491	Ficedula_albicollis
ENSCING00000024718	-	56	55.959	ENSFHEG00000007472	srsf4	81	65.333	Fundulus_heteroclitus
ENSCING00000024718	-	62	52.133	ENSGMOG00000012906	srsf4	61	52.607	Gadus_morhua
ENSCING00000024718	-	75	49.254	ENSGAFG00000018496	srsf4	63	51.813	Gambusia_affinis
ENSCING00000024718	-	57	57.949	ENSGACG00000002389	srsf4	54	55.729	Gasterosteus_aculeatus
ENSCING00000024718	-	56	58.031	ENSHBUG00000011326	-	83	40.751	Haplochromis_burtoni
ENSCING00000024718	-	78	65.625	ENSHCOG00000012540	srsf4	88	40.643	Hippocampus_comes
ENSCING00000024718	-	56	59.585	ENSKMAG00000013631	srsf4	90	42.038	Kryptolebias_marmoratus
ENSCING00000024718	-	56	60.417	ENSLAFG00000002575	SRSF4	63	46.259	Loxodonta_africana
ENSCING00000024718	-	64	50.193	ENSMMUG00000007110	SRSF4	78	44.099	Macaca_mulatta
ENSCING00000024718	-	56	57.576	ENSMAMG00000004888	srsf4	96	42.071	Mastacembelus_armatus
ENSCING00000024718	-	56	56.995	ENSMZEG00005026275	srsf4	83	42.236	Maylandia_zebra
ENSCING00000024718	-	56	56.477	ENSMMOG00000013653	srsf4	64	51.282	Mola_mola
ENSCING00000024718	-	56	60.938	ENSMODG00000011052	SRSF4	79	43.293	Monodelphis_domestica
ENSCING00000024718	-	57	57.436	ENSMALG00000013392	srsf4	65	54.124	Monopterus_albus
ENSCING00000024718	-	56	60.417	ENSNGAG00000012225	Srsf4	67	47.507	Nannospalax_galili
ENSCING00000024718	-	57	50.256	ENSNLEG00000030787	-	61	50.262	Nomascus_leucogenys
ENSCING00000024718	-	56	60.104	ENSODEG00000003230	SRSF4	65	47.399	Octodon_degus
ENSCING00000024718	-	56	60.104	ENSOCUG00000001837	SRSF4	67	42.655	Oryctolagus_cuniculus
ENSCING00000024718	-	56	54.404	ENSORLG00020016052	srsf4	64	55.440	Oryzias_latipes_hni
ENSCING00000024718	-	56	54.404	ENSORLG00015007566	srsf4	69	55.440	Oryzias_latipes_hsok
ENSCING00000024718	-	56	54.404	ENSOMEG00000005541	srsf4	95	42.978	Oryzias_melastigma
ENSCING00000024718	-	57	57.653	ENSPMGG00000013436	srsf4	93	65.672	Periophthalmus_magnuspinnatus
ENSCING00000024718	-	56	50.785	ENSPMAG00000009397	srsf4	66	51.832	Petromyzon_marinus
ENSCING00000024718	-	56	58.247	ENSPLAG00000008812	srsf4	96	43.064	Poecilia_latipinna
ENSCING00000024718	-	56	56.923	ENSPMEG00000023638	srsf4	96	44.798	Poecilia_mexicana
ENSCING00000024718	-	56	58.247	ENSPREG00000009639	srsf4	96	42.222	Poecilia_reticulata
ENSCING00000024718	-	56	60.417	ENSPCAG00000009879	SRSF4	52	47.653	Procavia_capensis
ENSCING00000024718	-	59	53.695	ENSPNYG00000003796	srsf4	90	42.515	Pundamilia_nyererei
ENSCING00000024718	-	56	56.545	ENSPNAG00000023844	srsf4	52	54.974	Pygocentrus_nattereri
ENSCING00000024718	-	56	56.186	ENSSFOG00015020292	srsf4	70	64.000	Scleropages_formosus
ENSCING00000024718	-	56	55.959	ENSSDUG00000007387	srsf4	52	55.729	Seriola_dumerili
ENSCING00000024718	-	56	48.705	ENSSLDG00000009745	srsf4	59	48.168	Seriola_lalandi_dorsalis
ENSCING00000024718	-	56	58.247	ENSSPAG00000014538	srsf4	68	65.333	Stegastes_partitus
ENSCING00000024718	-	56	55.959	ENSTRUG00000011891	srsf4	61	56.250	Takifugu_rubripes
ENSCING00000024718	-	75	39.077	ENSXCOG00000003212	-	54	52.000	Xiphophorus_couchianus
ENSCING00000024718	-	56	56.784	ENSXCOG00000018826	srsf4	89	50.376	Xiphophorus_couchianus