EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024771 (Gene tree)
Gene ID: 100176113
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S18a%2C mitochondrial
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2640 bases
Position: chr11:2352804-2355443
Accession: 100176113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034691	Ribosomal_S18	PF01084.20	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033653	-	811	-	ENSCINP00000034691	193 (aa)	XP_002128137	H2XYF7

Gene Model

Click here to download ENSCING00000024771's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024771	-	82	34.356	ENSG00000096080	MRPS18A	82	34.356	Homo_sapiens
ENSCING00000024771	-	83	34.545	ENSAMEG00000012117	MRPS18A	83	34.545	Ailuropoda_melanoleuca
ENSCING00000024771	-	74	35.811	ENSACIG00000017782	mrps18a	70	35.811	Amphilophus_citrinellus
ENSCING00000024771	-	82	40.244	ENSAPEG00000006971	mrps18a	77	40.244	Amphiprion_percula
ENSCING00000024771	-	82	36.196	ENSATEG00000003132	mrps18a	77	36.196	Anabas_testudineus
ENSCING00000024771	-	81	40.252	ENSAPLG00000016280	MRPS18A	99	40.252	Anas_platyrhynchos
ENSCING00000024771	-	84	37.427	ENSACAG00000000642	MRPS18A	85	37.427	Anolis_carolinensis
ENSCING00000024771	-	82	34.146	ENSANAG00000030889	MRPS18A	82	34.146	Aotus_nancymaae
ENSCING00000024771	-	74	38.776	ENSACLG00000008170	mrps18a	72	37.879	Astatotilapia_calliptera
ENSCING00000024771	-	55	41.284	ENSAMXG00000036055	-	81	41.284	Astyanax_mexicanus
ENSCING00000024771	-	76	35.333	ENSAMXG00000036348	mrps18a	71	35.333	Astyanax_mexicanus
ENSCING00000024771	-	75	34.228	ENSBTAG00000025571	MRPS18A	76	34.228	Bos_taurus
ENSCING00000024771	-	69	30.137	WBGene00022583	mrps-18A	74	30.137	Caenorhabditis_elegans
ENSCING00000024771	-	82	34.756	ENSCJAG00000017382	MRPS18A	82	34.756	Callithrix_jacchus
ENSCING00000024771	-	83	34.146	ENSCAFG00000001928	MRPS18A	83	34.146	Canis_familiaris
ENSCING00000024771	-	83	33.939	ENSCAFG00020012064	MRPS18A	69	33.939	Canis_lupus_dingo
ENSCING00000024771	-	75	34.228	ENSCHIG00000013039	MRPS18A	76	34.228	Capra_hircus
ENSCING00000024771	-	83	34.545	ENSTSYG00000001390	MRPS18A	83	34.545	Carlito_syrichta
ENSCING00000024771	-	75	34.899	ENSCPOG00000022949	MRPS18A	76	34.899	Cavia_porcellus
ENSCING00000024771	-	82	34.146	ENSCCAG00000021108	MRPS18A	82	34.146	Cebus_capucinus
ENSCING00000024771	-	82	34.969	ENSCATG00000012963	MRPS18A	82	34.969	Cercocebus_atys
ENSCING00000024771	-	75	34.667	ENSCLAG00000012929	MRPS18A	76	34.667	Chinchilla_lanigera
ENSCING00000024771	-	82	34.969	ENSCSAG00000012127	MRPS18A	82	34.969	Chlorocebus_sabaeus
ENSCING00000024771	-	75	39.865	ENSCPBG00000025243	MRPS18A	76	39.865	Chrysemys_picta_bellii
ENSCING00000024771	-	85	78.049	ENSCSAVG00000009539	-	95	78.049	Ciona_savignyi
ENSCING00000024771	-	82	34.969	ENSCANG00000039873	MRPS18A	82	34.969	Colobus_angolensis_palliatus
ENSCING00000024771	-	69	35.507	ENSCGRG00001017882	Mrps18a	78	35.507	Cricetulus_griseus_chok1gshd
ENSCING00000024771	-	74	40.541	ENSCSEG00000019650	mrps18a	66	40.541	Cynoglossus_semilaevis
ENSCING00000024771	-	94	36.898	ENSCVAG00000006511	mrps18a	88	36.898	Cyprinodon_variegatus
ENSCING00000024771	-	89	33.708	ENSDARG00000024465	mrps18a	83	34.270	Danio_rerio
ENSCING00000024771	-	75	32.886	ENSDNOG00000035755	MRPS18A	75	32.886	Dasypus_novemcinctus
ENSCING00000024771	-	83	36.527	ENSDORG00000014583	Mrps18a	83	36.527	Dipodomys_ordii
ENSCING00000024771	-	50	30.928	FBgn0051450	mRpS18A	63	30.928	Drosophila_melanogaster
ENSCING00000024771	-	55	30.822	ENSETEG00000014171	MRPS18A	78	30.822	Echinops_telfairi
ENSCING00000024771	-	72	34.266	ENSEASG00005003485	MRPS18A	52	34.266	Equus_asinus_asinus
ENSCING00000024771	-	72	34.266	ENSECAG00000004870	MRPS18A	52	34.266	Equus_caballus
ENSCING00000024771	-	77	37.179	ENSELUG00000005253	mrps18a	73	37.179	Esox_lucius
ENSCING00000024771	-	83	33.735	ENSFCAG00000036031	MRPS18A	83	33.735	Felis_catus
ENSCING00000024771	-	89	37.356	ENSFALG00000011356	MRPS18A	90	37.356	Ficedula_albicollis
ENSCING00000024771	-	78	34.416	ENSFDAG00000012875	MRPS18A	75	34.416	Fukomys_damarensis
ENSCING00000024771	-	82	38.415	ENSFHEG00000009014	mrps18a	77	38.415	Fundulus_heteroclitus
ENSCING00000024771	-	89	36.313	ENSGMOG00000012493	mrps18a	86	36.313	Gadus_morhua
ENSCING00000024771	-	61	39.167	ENSGALG00000010296	MRPS18A	82	39.167	Gallus_gallus
ENSCING00000024771	-	82	39.024	ENSGAFG00000005211	mrps18a	78	38.255	Gambusia_affinis
ENSCING00000024771	-	82	39.634	ENSGACG00000013370	mrps18a	72	40.268	Gasterosteus_aculeatus
ENSCING00000024771	-	65	41.085	ENSGAGG00000017954	MRPS18A	69	41.085	Gopherus_agassizii
ENSCING00000024771	-	82	34.356	ENSGGOG00000006303	-	82	34.356	Gorilla_gorilla
ENSCING00000024771	-	74	38.776	ENSHBUG00000014682	mrps18a	70	38.776	Haplochromis_burtoni
ENSCING00000024771	-	75	36.000	ENSHGLG00000014356	MRPS18A	76	36.000	Heterocephalus_glaber_female
ENSCING00000024771	-	75	36.000	ENSHGLG00100010988	MRPS18A	76	36.000	Heterocephalus_glaber_male
ENSCING00000024771	-	82	36.420	ENSHCOG00000000856	mrps18a	77	36.420	Hippocampus_comes
ENSCING00000024771	-	90	34.973	ENSIPUG00000017406	mrps18a	87	35.519	Ictalurus_punctatus
ENSCING00000024771	-	83	32.184	ENSSTOG00000004490	MRPS18A	83	32.184	Ictidomys_tridecemlineatus
ENSCING00000024771	-	97	33.503	ENSJJAG00000006567	Mrps18a	97	33.503	Jaculus_jaculus
ENSCING00000024771	-	83	38.182	ENSKMAG00000014910	mrps18a	78	38.182	Kryptolebias_marmoratus
ENSCING00000024771	-	82	37.195	ENSLBEG00000003391	mrps18a	77	37.195	Labrus_bergylta
ENSCING00000024771	-	56	43.750	ENSLACG00000022160	mrps18a	65	43.750	Latimeria_chalumnae
ENSCING00000024771	-	88	35.057	ENSLOCG00000016008	mrps18a	81	35.057	Lepisosteus_oculatus
ENSCING00000024771	-	84	34.731	ENSLAFG00000001168	MRPS18A	85	34.731	Loxodonta_africana
ENSCING00000024771	-	82	34.969	ENSMFAG00000038311	MRPS18A	82	34.969	Macaca_fascicularis
ENSCING00000024771	-	82	34.969	ENSMMUG00000014749	MRPS18A	82	34.969	Macaca_mulatta
ENSCING00000024771	-	82	34.969	ENSMNEG00000044642	MRPS18A	82	34.969	Macaca_nemestrina
ENSCING00000024771	-	79	35.897	ENSMLEG00000041828	MRPS18A	97	35.897	Mandrillus_leucophaeus
ENSCING00000024771	-	82	36.585	ENSMAMG00000015478	mrps18a	77	36.585	Mastacembelus_armatus
ENSCING00000024771	-	74	38.776	ENSMZEG00005014925	mrps18a	72	37.879	Maylandia_zebra
ENSCING00000024771	-	84	38.554	ENSMGAG00000010915	MRPS18A	86	38.554	Meleagris_gallopavo
ENSCING00000024771	-	83	34.756	ENSMICG00000005062	MRPS18A	83	34.756	Microcebus_murinus
ENSCING00000024771	-	84	33.333	ENSMOCG00000015168	-	87	33.333	Microtus_ochrogaster
ENSCING00000024771	-	84	36.257	ENSMOCG00000021207	-	84	36.257	Microtus_ochrogaster
ENSCING00000024771	-	82	37.805	ENSMMOG00000015248	mrps18a	79	37.805	Mola_mola
ENSCING00000024771	-	82	37.195	ENSMALG00000017044	mrps18a	79	37.415	Monopterus_albus
ENSCING00000024771	-	83	37.126	MGP_CAROLIEiJ_G0021656	Mrps18a	83	37.126	Mus_caroli
ENSCING00000024771	-	84	36.471	ENSMUSG00000023967	Mrps18a	84	36.471	Mus_musculus
ENSCING00000024771	-	83	38.690	MGP_PahariEiJ_G0020648	Mrps18a	83	38.690	Mus_pahari
ENSCING00000024771	-	84	36.471	MGP_SPRETEiJ_G0022568	Mrps18a	84	36.471	Mus_spretus
ENSCING00000024771	-	75	32.886	ENSMPUG00000012868	MRPS18A	62	32.886	Mustela_putorius_furo
ENSCING00000024771	-	83	36.145	ENSMLUG00000017755	MRPS18A	83	36.145	Myotis_lucifugus
ENSCING00000024771	-	83	36.310	ENSNGAG00000020052	Mrps18a	84	36.310	Nannospalax_galili
ENSCING00000024771	-	74	39.456	ENSNBRG00000021152	mrps18a	70	39.456	Neolamprologus_brichardi
ENSCING00000024771	-	82	34.356	ENSNLEG00000003865	MRPS18A	82	34.356	Nomascus_leucogenys
ENSCING00000024771	-	75	35.333	ENSODEG00000015388	MRPS18A	75	35.333	Octodon_degus
ENSCING00000024771	-	74	39.456	ENSONIG00000000609	mrps18a	70	39.456	Oreochromis_niloticus
ENSCING00000024771	-	78	33.766	ENSOANG00000001955	MRPS18A	96	33.766	Ornithorhynchus_anatinus
ENSCING00000024771	-	83	35.976	ENSOCUG00000005544	MRPS18A	83	35.976	Oryctolagus_cuniculus
ENSCING00000024771	-	82	35.976	ENSORLG00000023864	mrps18a	78	35.976	Oryzias_latipes
ENSCING00000024771	-	82	35.976	ENSORLG00020002882	mrps18a	78	35.976	Oryzias_latipes_hni
ENSCING00000024771	-	82	36.585	ENSORLG00015022065	mrps18a	78	36.585	Oryzias_latipes_hsok
ENSCING00000024771	-	82	37.576	ENSOMEG00000018124	mrps18a	77	37.576	Oryzias_melastigma
ENSCING00000024771	-	83	34.756	ENSOGAG00000026551	MRPS18A	83	34.756	Otolemur_garnettii
ENSCING00000024771	-	75	34.228	ENSOARG00000008279	MRPS18A	76	34.228	Ovis_aries
ENSCING00000024771	-	82	34.356	ENSPPAG00000036291	MRPS18A	82	34.356	Pan_paniscus
ENSCING00000024771	-	83	33.939	ENSPPRG00000006429	MRPS18A	83	33.939	Panthera_pardus
ENSCING00000024771	-	83	34.337	ENSPTIG00000001653	MRPS18A	83	34.337	Panthera_tigris_altaica
ENSCING00000024771	-	82	34.356	ENSPTRG00000018209	MRPS18A	82	34.356	Pan_troglodytes
ENSCING00000024771	-	82	34.969	ENSPANG00000006967	MRPS18A	82	34.969	Papio_anubis
ENSCING00000024771	-	75	40.940	ENSPKIG00000012807	mrps18a	63	40.940	Paramormyrops_kingsleyae
ENSCING00000024771	-	71	39.716	ENSPSIG00000013672	MRPS18A	72	39.716	Pelodiscus_sinensis
ENSCING00000024771	-	77	36.364	ENSPEMG00000000405	Mrps18a	76	36.364	Peromyscus_maniculatus_bairdii
ENSCING00000024771	-	82	38.037	ENSPMAG00000007012	mrps18a	87	38.037	Petromyzon_marinus
ENSCING00000024771	-	75	36.000	ENSPCIG00000024858	MRPS18A	76	36.000	Phascolarctos_cinereus
ENSCING00000024771	-	78	40.645	ENSPFOG00000009046	mrps18a	96	40.645	Poecilia_formosa
ENSCING00000024771	-	82	39.634	ENSPLAG00000011106	mrps18a	77	39.634	Poecilia_latipinna
ENSCING00000024771	-	82	39.634	ENSPMEG00000000736	mrps18a	80	39.456	Poecilia_mexicana
ENSCING00000024771	-	82	39.024	ENSPREG00000012172	mrps18a	78	38.255	Poecilia_reticulata
ENSCING00000024771	-	75	34.228	ENSPPYG00000017282	MRPS18A	76	34.228	Pongo_abelii
ENSCING00000024771	-	75	36.242	ENSPCOG00000014911	MRPS18A	76	35.052	Propithecus_coquereli
ENSCING00000024771	-	74	38.776	ENSPNYG00000014753	mrps18a	70	38.776	Pundamilia_nyererei
ENSCING00000024771	-	84	33.929	ENSPNAG00000023462	mrps18a	81	33.140	Pygocentrus_nattereri
ENSCING00000024771	-	84	35.928	ENSRNOG00000019511	Mrps18a	84	35.928	Rattus_norvegicus
ENSCING00000024771	-	82	34.969	ENSRBIG00000028789	MRPS18A	82	34.969	Rhinopithecus_bieti
ENSCING00000024771	-	82	34.969	ENSRROG00000042368	-	82	34.969	Rhinopithecus_roxellana
ENSCING00000024771	-	83	36.585	ENSSBOG00000019943	MRPS18A	83	36.585	Saimiri_boliviensis_boliviensis
ENSCING00000024771	-	84	32.738	ENSSHAG00000015048	-	84	32.738	Sarcophilus_harrisii
ENSCING00000024771	-	82	39.394	ENSSFOG00015005628	mrps18a	78	39.394	Scleropages_formosus
ENSCING00000024771	-	82	37.805	ENSSMAG00000009353	mrps18a	79	37.805	Scophthalmus_maximus
ENSCING00000024771	-	68	37.956	ENSSLDG00000025435	mrps18a	73	37.956	Seriola_lalandi_dorsalis
ENSCING00000024771	-	84	36.145	ENSSPUG00000011517	MRPS18A	85	36.145	Sphenodon_punctatus
ENSCING00000024771	-	83	40.606	ENSSPAG00000000034	mrps18a	78	40.606	Stegastes_partitus
ENSCING00000024771	-	76	35.762	ENSSSCG00000001692	MRPS18A	76	35.762	Sus_scrofa
ENSCING00000024771	-	75	38.514	ENSTGUG00000008142	MRPS18A	99	38.514	Taeniopygia_guttata
ENSCING00000024771	-	82	37.805	ENSTRUG00000025134	mrps18a	77	37.805	Takifugu_rubripes
ENSCING00000024771	-	82	37.805	ENSTNIG00000016302	mrps18a	77	37.805	Tetraodon_nigroviridis
ENSCING00000024771	-	83	33.939	ENSUAMG00000013758	MRPS18A	83	33.939	Ursus_americanus
ENSCING00000024771	-	83	33.939	ENSUMAG00000005910	MRPS18A	83	33.939	Ursus_maritimus
ENSCING00000024771	-	54	37.037	ENSVVUG00000022444	-	53	37.037	Vulpes_vulpes
ENSCING00000024771	-	83	33.939	ENSVVUG00000029092	-	83	33.939	Vulpes_vulpes
ENSCING00000024771	-	55	41.818	ENSXETG00000003270	mrps18a	72	41.818	Xenopus_tropicalis
ENSCING00000024771	-	81	35.802	ENSXCOG00000007223	mrps18a	83	35.802	Xiphophorus_couchianus
ENSCING00000024771	-	82	38.415	ENSXMAG00000004867	mrps18a	83	35.802	Xiphophorus_maculatus