EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024826 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 970 bases
Position: chr9:6508755-6509724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023796	Ribosomal_S16	PF00886.19	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024042	-	713	-	ENSCINP00000023796	169 (aa)	-	F6W310

Gene Model

Click here to download ENSCING00000024826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024826	-	66	52.632	ENSG00000182180	MRPS16	77	57.895	Homo_sapiens
ENSCING00000024826	-	56	51.020	ENSAPOG00000012117	mrps16	69	51.546	Acanthochromis_polyacanthus
ENSCING00000024826	-	66	53.571	ENSAMEG00000016931	MRPS16	74	58.763	Ailuropoda_melanoleuca
ENSCING00000024826	-	73	42.520	ENSACIG00000008004	mrps16	74	47.170	Amphilophus_citrinellus
ENSCING00000024826	-	59	48.544	ENSAOCG00000006801	mrps16	70	51.020	Amphiprion_ocellaris
ENSCING00000024826	-	59	47.573	ENSAPEG00000004562	mrps16	69	50.515	Amphiprion_percula
ENSCING00000024826	-	66	47.826	ENSATEG00000024962	mrps16	70	52.041	Anabas_testudineus
ENSCING00000024826	-	66	51.754	ENSANAG00000036208	MRPS16	77	56.579	Aotus_nancymaae
ENSCING00000024826	-	74	43.846	ENSACLG00000016154	mrps16	68	52.688	Astatotilapia_calliptera
ENSCING00000024826	-	53	48.352	ENSBTAG00000053412	-	83	48.352	Bos_taurus
ENSCING00000024826	-	66	52.679	ENSBTAG00000000950	MRPS16	72	57.732	Bos_taurus
ENSCING00000024826	-	53	48.421	WBGene00018961	mrps-16	67	47.959	Caenorhabditis_elegans
ENSCING00000024826	-	66	50.877	ENSCJAG00000007538	MRPS16	77	55.263	Callithrix_jacchus
ENSCING00000024826	-	66	37.500	ENSCAFG00000008928	-	74	40.404	Canis_familiaris
ENSCING00000024826	-	66	56.140	ENSCAFG00020023773	-	72	60.825	Canis_lupus_dingo
ENSCING00000024826	-	63	53.774	ENSCAFG00020025503	-	76	57.292	Canis_lupus_dingo
ENSCING00000024826	-	55	47.872	ENSCHIG00000016255	-	68	47.872	Capra_hircus
ENSCING00000024826	-	66	50.893	ENSTSYG00000034400	-	78	54.545	Carlito_syrichta
ENSCING00000024826	-	66	38.739	ENSTSYG00000014457	-	68	41.667	Carlito_syrichta
ENSCING00000024826	-	66	46.491	ENSCAPG00000015053	MRPS16	75	49.485	Cavia_aperea
ENSCING00000024826	-	66	51.754	ENSCPOG00000025500	MRPS16	72	55.670	Cavia_porcellus
ENSCING00000024826	-	66	53.509	ENSCCAG00000037051	MRPS16	82	56.250	Cebus_capucinus
ENSCING00000024826	-	66	52.632	ENSCATG00000040457	MRPS16	77	57.895	Cercocebus_atys
ENSCING00000024826	-	66	52.632	ENSCLAG00000010443	MRPS16	72	57.732	Chinchilla_lanigera
ENSCING00000024826	-	66	52.632	ENSCSAG00000018976	-	71	55.670	Chlorocebus_sabaeus
ENSCING00000024826	-	66	52.632	ENSCSAG00000018977	-	71	55.670	Chlorocebus_sabaeus
ENSCING00000024826	-	66	52.632	ENSCSAG00000000413	-	71	55.670	Chlorocebus_sabaeus
ENSCING00000024826	-	65	53.153	ENSCHOG00000012520	MRPS16	73	57.292	Choloepus_hoffmanni
ENSCING00000024826	-	66	51.786	ENSCPBG00000022282	MRPS16	75	53.608	Chrysemys_picta_bellii
ENSCING00000024826	-	99	84.431	ENSCSAVG00000006333	-	89	84.967	Ciona_savignyi
ENSCING00000024826	-	66	53.509	ENSCANG00000010568	MRPS16	77	59.211	Colobus_angolensis_palliatus
ENSCING00000024826	-	65	52.252	ENSCGRG00001023386	Mrps16	72	55.670	Cricetulus_griseus_chok1gshd
ENSCING00000024826	-	65	52.252	ENSCGRG00000002182	Mrps16	72	55.670	Cricetulus_griseus_crigri
ENSCING00000024826	-	65	44.248	ENSCSEG00000021662	mrps16	69	50.538	Cynoglossus_semilaevis
ENSCING00000024826	-	56	52.041	ENSCVAG00000012001	mrps16	72	52.041	Cyprinodon_variegatus
ENSCING00000024826	-	73	45.968	ENSDARG00000098972	mrps16	80	49.091	Danio_rerio
ENSCING00000024826	-	60	56.863	ENSDNOG00000047675	MRPS16	71	57.732	Dasypus_novemcinctus
ENSCING00000024826	-	66	52.679	ENSDORG00000008275	-	72	56.701	Dipodomys_ordii
ENSCING00000024826	-	68	43.966	FBgn0033907	mRpS16	77	46.465	Drosophila_melanogaster
ENSCING00000024826	-	56	48.421	ENSEBUG00000001088	mrps16	81	48.421	Eptatretus_burgeri
ENSCING00000024826	-	66	52.679	ENSEASG00005017192	MRPS16	73	57.732	Equus_asinus_asinus
ENSCING00000024826	-	66	52.679	ENSECAG00000009146	MRPS16	73	57.732	Equus_caballus
ENSCING00000024826	-	66	48.246	ENSELUG00000011609	mrps16	72	50.000	Esox_lucius
ENSCING00000024826	-	66	53.571	ENSFCAG00000037310	MRPS16	72	58.763	Felis_catus
ENSCING00000024826	-	54	45.833	ENSFALG00000009917	MRPS16	79	46.789	Ficedula_albicollis
ENSCING00000024826	-	57	56.122	ENSFDAG00000014014	MRPS16	71	56.701	Fukomys_damarensis
ENSCING00000024826	-	66	49.123	ENSFHEG00000022624	mrps16	70	52.041	Fundulus_heteroclitus
ENSCING00000024826	-	64	44.643	ENSGMOG00000001558	mrps16	74	50.000	Gadus_morhua
ENSCING00000024826	-	59	48.077	ENSGALG00000050621	MRPS16	86	47.126	Gallus_gallus
ENSCING00000024826	-	65	50.442	ENSGAFG00000012456	mrps16	70	55.102	Gambusia_affinis
ENSCING00000024826	-	60	47.115	ENSGACG00000001715	mrps16	68	50.538	Gasterosteus_aculeatus
ENSCING00000024826	-	66	53.571	ENSGAGG00000000097	-	68	54.639	Gopherus_agassizii
ENSCING00000024826	-	59	42.000	ENSGAGG00000005030	-	67	41.176	Gopherus_agassizii
ENSCING00000024826	-	66	52.632	ENSGGOG00000015055	MRPS16	71	55.670	Gorilla_gorilla
ENSCING00000024826	-	72	45.161	ENSHBUG00000015492	mrps16	69	51.613	Haplochromis_burtoni
ENSCING00000024826	-	66	50.877	ENSHGLG00000012797	MRPS16	72	55.670	Heterocephalus_glaber_female
ENSCING00000024826	-	66	50.877	ENSHGLG00100007890	MRPS16	72	55.670	Heterocephalus_glaber_male
ENSCING00000024826	-	57	50.515	ENSIPUG00000003397	mrps16	68	53.846	Ictalurus_punctatus
ENSCING00000024826	-	66	52.679	ENSSTOG00000027184	MRPS16	72	57.732	Ictidomys_tridecemlineatus
ENSCING00000024826	-	65	52.252	ENSJJAG00000023255	Mrps16	72	56.701	Jaculus_jaculus
ENSCING00000024826	-	64	43.750	ENSKMAG00000009755	mrps16	69	47.423	Kryptolebias_marmoratus
ENSCING00000024826	-	65	44.248	ENSLBEG00000024661	mrps16	67	48.387	Labrus_bergylta
ENSCING00000024826	-	57	56.122	ENSLACG00000019160	MRPS16	69	56.701	Latimeria_chalumnae
ENSCING00000024826	-	66	51.327	ENSLOCG00000003927	mrps16	71	56.250	Lepisosteus_oculatus
ENSCING00000024826	-	66	49.107	ENSLAFG00000023124	MRPS16	74	53.608	Loxodonta_africana
ENSCING00000024826	-	66	52.632	ENSMFAG00000032103	MRPS16	71	55.670	Macaca_fascicularis
ENSCING00000024826	-	66	52.632	ENSMNEG00000041963	MRPS16	77	57.895	Macaca_nemestrina
ENSCING00000024826	-	66	52.632	ENSMLEG00000044343	MRPS16	77	57.895	Mandrillus_leucophaeus
ENSCING00000024826	-	65	47.788	ENSMAMG00000015181	mrps16	70	51.546	Mastacembelus_armatus
ENSCING00000024826	-	59	47.619	ENSMGAG00000000893	MRPS16	81	49.550	Meleagris_gallopavo
ENSCING00000024826	-	65	52.252	ENSMAUG00000010491	Mrps16	72	55.670	Mesocricetus_auratus
ENSCING00000024826	-	66	52.212	ENSMICG00000042573	MRPS16	72	56.701	Microcebus_murinus
ENSCING00000024826	-	65	53.153	ENSMOCG00000006927	Mrps16	72	56.701	Microtus_ochrogaster
ENSCING00000024826	-	57	49.000	ENSMMOG00000010770	mrps16	72	50.000	Mola_mola
ENSCING00000024826	-	66	53.571	ENSMODG00000000168	MRPS16	73	58.763	Monodelphis_domestica
ENSCING00000024826	-	64	42.857	ENSMALG00000007222	mrps16	66	48.387	Monopterus_albus
ENSCING00000024826	-	50	56.977	MGP_CAROLIEiJ_G0018987	Mrps16	72	57.732	Mus_caroli
ENSCING00000024826	-	50	56.977	ENSMUSG00000049960	Mrps16	72	57.732	Mus_musculus
ENSCING00000024826	-	50	58.140	MGP_PahariEiJ_G0030001	Mrps16	72	57.732	Mus_pahari
ENSCING00000024826	-	50	56.977	MGP_SPRETEiJ_G0019865	Mrps16	72	57.732	Mus_spretus
ENSCING00000024826	-	66	54.464	ENSMPUG00000003777	MRPS16	63	59.794	Mustela_putorius_furo
ENSCING00000024826	-	60	55.882	ENSMLUG00000022951	MRPS16	72	56.701	Myotis_lucifugus
ENSCING00000024826	-	66	50.442	ENSNGAG00000019881	Mrps16	72	54.639	Nannospalax_galili
ENSCING00000024826	-	74	43.077	ENSNBRG00000020914	mrps16	68	51.613	Neolamprologus_brichardi
ENSCING00000024826	-	66	50.877	ENSNLEG00000018904	-	71	53.608	Nomascus_leucogenys
ENSCING00000024826	-	64	41.284	ENSNLEG00000029922	-	65	47.059	Nomascus_leucogenys
ENSCING00000024826	-	66	52.632	ENSNLEG00000016597	-	77	57.895	Nomascus_leucogenys
ENSCING00000024826	-	59	57.000	ENSMEUG00000008644	MRPS16	80	57.732	Notamacropus_eugenii
ENSCING00000024826	-	66	52.632	ENSOPRG00000018616	MRPS16	74	56.701	Ochotona_princeps
ENSCING00000024826	-	57	55.102	ENSODEG00000019541	-	72	55.670	Octodon_degus
ENSCING00000024826	-	72	45.968	ENSONIG00000014282	mrps16	69	52.688	Oreochromis_niloticus
ENSCING00000024826	-	66	51.261	ENSOANG00000012378	MRPS16	71	56.701	Ornithorhynchus_anatinus
ENSCING00000024826	-	60	50.980	ENSOCUG00000024223	-	72	51.546	Oryctolagus_cuniculus
ENSCING00000024826	-	60	53.922	ENSOCUG00000023231	-	72	54.639	Oryctolagus_cuniculus
ENSCING00000024826	-	59	49.020	ENSORLG00000022084	mrps16	70	50.000	Oryzias_latipes
ENSCING00000024826	-	59	50.980	ENSORLG00020019793	mrps16	70	52.041	Oryzias_latipes_hni
ENSCING00000024826	-	59	50.000	ENSORLG00015015664	mrps16	70	51.020	Oryzias_latipes_hsok
ENSCING00000024826	-	66	47.414	ENSOMEG00000021490	mrps16	71	51.020	Oryzias_melastigma
ENSCING00000024826	-	66	52.212	ENSOGAG00000033867	MRPS16	71	57.732	Otolemur_garnettii
ENSCING00000024826	-	66	52.679	ENSOARG00000007548	MRPS16	63	57.732	Ovis_aries
ENSCING00000024826	-	66	52.632	ENSPPAG00000009406	MRPS16	71	55.670	Pan_paniscus
ENSCING00000024826	-	66	53.571	ENSPPRG00000024759	MRPS16	72	58.763	Panthera_pardus
ENSCING00000024826	-	66	53.571	ENSPTIG00000021428	MRPS16	72	58.763	Panthera_tigris_altaica
ENSCING00000024826	-	66	52.632	ENSPTRG00000002627	MRPS16	71	55.670	Pan_troglodytes
ENSCING00000024826	-	56	44.681	ENSPTRG00000044912	-	86	44.681	Pan_troglodytes
ENSCING00000024826	-	66	51.754	ENSPANG00000022374	MRPS16	77	56.579	Papio_anubis
ENSCING00000024826	-	63	51.852	ENSPKIG00000013816	mrps16	68	54.255	Paramormyrops_kingsleyae
ENSCING00000024826	-	63	48.148	ENSPSIG00000005589	MRPS16	68	51.546	Pelodiscus_sinensis
ENSCING00000024826	-	65	47.788	ENSPMGG00000013450	mrps16	74	50.000	Periophthalmus_magnuspinnatus
ENSCING00000024826	-	65	54.054	ENSPEMG00000021378	Mrps16	72	56.701	Peromyscus_maniculatus_bairdii
ENSCING00000024826	-	66	50.893	ENSPCIG00000015166	MRPS16	73	56.701	Phascolarctos_cinereus
ENSCING00000024826	-	65	51.327	ENSPFOG00000014130	mrps16	70	54.082	Poecilia_formosa
ENSCING00000024826	-	65	51.327	ENSPLAG00000018686	mrps16	70	54.082	Poecilia_latipinna
ENSCING00000024826	-	65	51.327	ENSPMEG00000009648	mrps16	70	54.082	Poecilia_mexicana
ENSCING00000024826	-	70	49.587	ENSPREG00000005800	mrps16	70	54.082	Poecilia_reticulata
ENSCING00000024826	-	66	50.442	ENSPCOG00000009898	MRPS16	72	54.639	Propithecus_coquereli
ENSCING00000024826	-	68	52.586	ENSPVAG00000012996	MRPS16	76	57.426	Pteropus_vampyrus
ENSCING00000024826	-	64	48.649	ENSPNYG00000018439	mrps16	69	51.613	Pundamilia_nyererei
ENSCING00000024826	-	65	46.847	ENSPNAG00000027291	mrps16	71	51.546	Pygocentrus_nattereri
ENSCING00000024826	-	65	51.351	ENSRNOG00000006898	Mrps16	72	56.701	Rattus_norvegicus
ENSCING00000024826	-	66	53.509	ENSRBIG00000037015	MRPS16	77	59.211	Rhinopithecus_bieti
ENSCING00000024826	-	66	53.509	ENSRROG00000040939	MRPS16	77	59.211	Rhinopithecus_roxellana
ENSCING00000024826	-	66	53.509	ENSSBOG00000016492	MRPS16	77	59.211	Saimiri_boliviensis_boliviensis
ENSCING00000024826	-	66	50.000	ENSSHAG00000003006	MRPS16	72	54.639	Sarcophilus_harrisii
ENSCING00000024826	-	63	50.926	ENSSFOG00015007264	mrps16	70	55.208	Scleropages_formosus
ENSCING00000024826	-	65	49.558	ENSSMAG00000014748	mrps16	71	52.041	Scophthalmus_maximus
ENSCING00000024826	-	64	46.429	ENSSDUG00000015177	mrps16	67	51.613	Seriola_dumerili
ENSCING00000024826	-	64	46.429	ENSSLDG00000004507	mrps16	67	51.613	Seriola_lalandi_dorsalis
ENSCING00000024826	-	66	49.558	ENSSPUG00000012312	MRPS16	70	51.546	Sphenodon_punctatus
ENSCING00000024826	-	56	51.020	ENSTNIG00000006736	mrps16	70	51.020	Tetraodon_nigroviridis
ENSCING00000024826	-	56	51.020	ENSTNIG00000014796	MRPS16	70	51.020	Tetraodon_nigroviridis
ENSCING00000024826	-	66	51.786	ENSTTRG00000000825	MRPS16	76	56.701	Tursiops_truncatus
ENSCING00000024826	-	66	53.571	ENSUAMG00000005153	MRPS16	72	58.763	Ursus_americanus
ENSCING00000024826	-	66	53.571	ENSUMAG00000009089	MRPS16	72	58.763	Ursus_maritimus
ENSCING00000024826	-	66	50.893	ENSVPAG00000007263	MRPS16	76	55.670	Vicugna_pacos
ENSCING00000024826	-	66	54.464	ENSVVUG00000022733	-	72	59.794	Vulpes_vulpes
ENSCING00000024826	-	57	53.061	ENSXETG00000001399	mrps16	69	52.577	Xenopus_tropicalis
ENSCING00000024826	-	65	52.212	ENSXCOG00000008280	mrps16	76	54.082	Xiphophorus_couchianus
ENSCING00000024826	-	64	52.679	ENSXMAG00000000052	mrps16	71	54.639	Xiphophorus_maculatus