EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000024877 (Gene tree)
Gene ID
100182395
Gene Symbol
-
Alias
-
Full Name
U6 snRNA-associated Sm-like protein LSm8
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
291 bases
Position
chr5:2589696-2589986
Accession
100182395
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000030337LSMPF01423.224.4e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000032498-291-ENSCINP0000003033796 (aa)XP_002121997H2XL05
Gene Model
Click here to download ENSCING00000024877's gene model file
Pathways
Pathway IDPathway NameSource
cin03018RNA degradationKEGG
cin03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024877's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000024877-10075.000ENSG00000128534LSM810080.597Homo_sapiens
ENSCING00000024877-10075.000ENSAPOG00000008649lsm810075.000Acanthochromis_polyacanthus
ENSCING00000024877-10075.000ENSAMEG00000001162LSM810075.000Ailuropoda_melanoleuca
ENSCING00000024877-7878.667ENSACIG00000014694lsm810078.667Amphilophus_citrinellus
ENSCING00000024877-10075.000ENSAOCG00000013926lsm810075.000Amphiprion_ocellaris
ENSCING00000024877-10075.000ENSAPEG00000023502lsm810075.000Amphiprion_percula
ENSCING00000024877-7878.667ENSATEG00000023432lsm810078.667Anabas_testudineus
ENSCING00000024877-8877.381ENSAPLG00000005115LSM88577.381Anas_platyrhynchos
ENSCING00000024877-10075.000ENSANAG00000027771LSM810077.027Aotus_nancymaae
ENSCING00000024877-10075.000ENSACLG00000011253lsm810075.000Astatotilapia_calliptera
ENSCING00000024877-10075.000ENSAMXG00000042902lsm810075.000Astyanax_mexicanus
ENSCING00000024877-10075.000ENSBTAG00000012649LSM810075.000Bos_taurus
ENSCING00000024877-9955.789WBGene00003082lsm-89755.789Caenorhabditis_elegans
ENSCING00000024877-10075.000ENSCJAG00000046406LSM810077.027Callithrix_jacchus
ENSCING00000024877-9875.532ENSCAFG00000016459LSM89575.532Canis_familiaris
ENSCING00000024877-10075.000ENSCAFG00020007643-10075.000Canis_lupus_dingo
ENSCING00000024877-10069.792ENSCAFG00020012800-7569.792Canis_lupus_dingo
ENSCING00000024877-8877.381ENSCHIG00000014201LSM88977.381Capra_hircus
ENSCING00000024877-10075.000ENSTSYG00000032434LSM810075.000Carlito_syrichta
ENSCING00000024877-7778.378ENSCAPG00000008253LSM810078.378Cavia_aperea
ENSCING00000024877-10075.000ENSCPOG00000035673LSM810075.000Cavia_porcellus
ENSCING00000024877-10075.000ENSCCAG00000021329LSM810077.027Cebus_capucinus
ENSCING00000024877-10075.000ENSCATG00000045302LSM810077.027Cercocebus_atys
ENSCING00000024877-10075.000ENSCLAG00000003726LSM810075.000Chinchilla_lanigera
ENSCING00000024877-10075.000ENSCSAG00000010802-10075.000Chlorocebus_sabaeus
ENSCING00000024877-10073.958ENSCSAG00000019007-10073.958Chlorocebus_sabaeus
ENSCING00000024877-8877.381ENSCPBG00000008154LSM88677.381Chrysemys_picta_bellii
ENSCING00000024877-10075.000ENSCANG00000040728LSM810077.027Colobus_angolensis_palliatus
ENSCING00000024877-10075.000ENSCGRG00001000450Lsm810075.000Cricetulus_griseus_chok1gshd
ENSCING00000024877-8877.381ENSCGRG00000005587Lsm89977.381Cricetulus_griseus_crigri
ENSCING00000024877-10065.625ENSCSEG00000004164lsm810065.625Cynoglossus_semilaevis
ENSCING00000024877-10073.958ENSCVAG00000020547lsm810073.958Cyprinodon_variegatus
ENSCING00000024877-10073.958ENSDARG00000091656lsm810073.958Danio_rerio
ENSCING00000024877-10075.000ENSDNOG00000034613LSM810075.000Dasypus_novemcinctus
ENSCING00000024877-10075.000ENSDORG00000027868Lsm810075.000Dipodomys_ordii
ENSCING00000024877-9861.702FBgn0035271CG20219961.702Drosophila_melanogaster
ENSCING00000024877-10075.000ENSETEG00000011594LSM810075.000Echinops_telfairi
ENSCING00000024877-7778.378ENSEBUG00000012017lsm810078.378Eptatretus_burgeri
ENSCING00000024877-10075.000ENSEASG00005008932LSM86275.000Equus_asinus_asinus
ENSCING00000024877-8877.381ENSECAG00000024025LSM87677.381Equus_caballus
ENSCING00000024877-10072.917ENSELUG00000010138lsm810072.917Esox_lucius
ENSCING00000024877-8356.250ENSFCAG00000044794-8156.250Felis_catus
ENSCING00000024877-10075.000ENSFCAG00000036620-10075.000Felis_catus
ENSCING00000024877-10075.000ENSFALG00000010023LSM810075.000Ficedula_albicollis
ENSCING00000024877-10075.000ENSFDAG00000019530LSM810075.000Fukomys_damarensis
ENSCING00000024877-10075.000ENSFHEG00000013729lsm810075.000Fundulus_heteroclitus
ENSCING00000024877-10075.000ENSGALG00000009110LSM810075.000Gallus_gallus
ENSCING00000024877-10073.958ENSGAFG00000001135lsm810073.958Gambusia_affinis
ENSCING00000024877-10075.000ENSGAGG00000017366LSM810075.000Gopherus_agassizii
ENSCING00000024877-10075.000ENSGGOG00000041883LSM810075.000Gorilla_gorilla
ENSCING00000024877-10075.000ENSHBUG00000003646lsm810075.000Haplochromis_burtoni
ENSCING00000024877-10068.750ENSHGLG00000019782-10068.750Heterocephalus_glaber_female
ENSCING00000024877-7180.882ENSHGLG00000001988-9980.882Heterocephalus_glaber_female
ENSCING00000024877-10070.833ENSHGLG00100012166-10070.833Heterocephalus_glaber_male
ENSCING00000024877-9876.596ENSHGLG00100003934-9476.596Heterocephalus_glaber_male
ENSCING00000024877-10073.958ENSHCOG00000005037lsm810073.958Hippocampus_comes
ENSCING00000024877-10075.000ENSIPUG00000019811NAA3810075.000Ictalurus_punctatus
ENSCING00000024877-10075.000ENSSTOG00000009039LSM810075.000Ictidomys_tridecemlineatus
ENSCING00000024877-9265.909ENSSTOG00000034801-8165.909Ictidomys_tridecemlineatus
ENSCING00000024877-10075.000ENSJJAG00000009031Lsm89975.000Jaculus_jaculus
ENSCING00000024877-10075.000ENSKMAG00000018983lsm810075.000Kryptolebias_marmoratus
ENSCING00000024877-10073.958ENSLACG00000010231LSM810073.958Latimeria_chalumnae
ENSCING00000024877-10073.958ENSLOCG00000015580lsm810073.958Lepisosteus_oculatus
ENSCING00000024877-10074.227ENSLAFG00000011242LSM810074.227Loxodonta_africana
ENSCING00000024877-10072.917ENSMFAG00000013044-10072.917Macaca_fascicularis
ENSCING00000024877-10075.000ENSMFAG00000035798LSM810077.027Macaca_fascicularis
ENSCING00000024877-10075.000ENSMMUG00000046401LSM810077.027Macaca_mulatta
ENSCING00000024877-10075.000ENSMNEG00000036764-10077.027Macaca_nemestrina
ENSCING00000024877-7876.000ENSMNEG00000011141-10076.000Macaca_nemestrina
ENSCING00000024877-10075.000ENSMLEG00000035828-10077.027Mandrillus_leucophaeus
ENSCING00000024877-10063.542ENSMLEG00000039324-10063.542Mandrillus_leucophaeus
ENSCING00000024877-7878.667ENSMAMG00000018839lsm810078.667Mastacembelus_armatus
ENSCING00000024877-10075.000ENSMZEG00005019138lsm810075.000Maylandia_zebra
ENSCING00000024877-10075.000ENSMGAG00000008808LSM810075.000Meleagris_gallopavo
ENSCING00000024877-10061.458ENSMAUG00000015356-10061.458Mesocricetus_auratus
ENSCING00000024877-10069.792ENSMAUG00000015721-10069.792Mesocricetus_auratus
ENSCING00000024877-7770.270ENSMAUG00000020287-10070.270Mesocricetus_auratus
ENSCING00000024877-10075.000ENSMICG00000042730LSM810075.000Microcebus_murinus
ENSCING00000024877-10075.000ENSMOCG00000001688Lsm810075.000Microtus_ochrogaster
ENSCING00000024877-7878.667ENSMMOG00000006046lsm810078.667Mola_mola
ENSCING00000024877-6585.484ENSMODG00000015729LSM87985.484Monodelphis_domestica
ENSCING00000024877-10073.958ENSMALG00000000405lsm810073.958Monopterus_albus
ENSCING00000024877-10075.000MGP_CAROLIEiJ_G0028125-10075.000Mus_caroli
ENSCING00000024877-10075.000ENSMUSG00000044155Lsm810075.000Mus_musculus
ENSCING00000024877-10075.000MGP_PahariEiJ_G0021881Lsm810080.000Mus_pahari
ENSCING00000024877-10075.000MGP_SPRETEiJ_G0029125-10075.000Mus_spretus
ENSCING00000024877-10075.000ENSMLUG00000006837-10075.000Myotis_lucifugus
ENSCING00000024877-10073.958ENSMLUG00000027762-10073.958Myotis_lucifugus
ENSCING00000024877-10075.000ENSNGAG00000016554Lsm810075.000Nannospalax_galili
ENSCING00000024877-10075.000ENSNBRG00000014441lsm810075.000Neolamprologus_brichardi
ENSCING00000024877-10075.000ENSNLEG00000011768LSM810075.000Nomascus_leucogenys
ENSCING00000024877-10064.583ENSMEUG00000007801LSM810064.583Notamacropus_eugenii
ENSCING00000024877-8877.381ENSOPRG00000014809LSM89977.381Ochotona_princeps
ENSCING00000024877-9062.791ENSODEG00000020290-10062.791Octodon_degus
ENSCING00000024877-10075.000ENSODEG00000000418-10075.000Octodon_degus
ENSCING00000024877-10075.000ENSOANG00000014536LSM810075.000Ornithorhynchus_anatinus
ENSCING00000024877-10074.227ENSOCUG00000017359LSM810074.227Oryctolagus_cuniculus
ENSCING00000024877-10064.583ENSORLG00000017432lsm810064.583Oryzias_latipes
ENSCING00000024877-10064.583ENSORLG00020004376lsm810064.583Oryzias_latipes_hni
ENSCING00000024877-10075.000ENSORLG00015003757lsm810075.000Oryzias_latipes_hsok
ENSCING00000024877-10064.583ENSOMEG00000022509lsm810065.625Oryzias_melastigma
ENSCING00000024877-10075.000ENSOGAG00000013377LSM810075.000Otolemur_garnettii
ENSCING00000024877-10075.000ENSOARG00000017974LSM810075.000Ovis_aries
ENSCING00000024877-7880.000ENSPPAG00000043228-10080.000Pan_paniscus
ENSCING00000024877-10075.000ENSPPRG00000006444LSM810075.000Panthera_pardus
ENSCING00000024877-10075.000ENSPTIG00000004722LSM89778.571Panthera_tigris_altaica
ENSCING00000024877-7880.000ENSPTRG00000046596-10080.000Pan_troglodytes
ENSCING00000024877-10075.000ENSPANG00000035470-10077.027Papio_anubis
ENSCING00000024877-10070.833ENSPANG00000019395-10070.833Papio_anubis
ENSCING00000024877-8876.190ENSPKIG00000006092lsm88576.190Paramormyrops_kingsleyae
ENSCING00000024877-7880.000ENSPSIG00000017054LSM810080.000Pelodiscus_sinensis
ENSCING00000024877-7878.667ENSPMGG00000016442lsm810078.667Periophthalmus_magnuspinnatus
ENSCING00000024877-7777.027ENSPEMG00000009153Lsm810077.027Peromyscus_maniculatus_bairdii
ENSCING00000024877-9775.269ENSPCIG00000021467LSM89875.269Phascolarctos_cinereus
ENSCING00000024877-10073.958ENSPFOG00000012340lsm810073.958Poecilia_formosa
ENSCING00000024877-10069.792ENSPLAG00000000516lsm810069.792Poecilia_latipinna
ENSCING00000024877-10073.958ENSPMEG00000022567lsm810073.958Poecilia_mexicana
ENSCING00000024877-7667.500ENSPREG00000005527lsm87267.500Poecilia_reticulata
ENSCING00000024877-10075.000ENSPPYG00000017942LSM810075.000Pongo_abelii
ENSCING00000024877-9659.783ENSPCOG00000017982-9559.783Propithecus_coquereli
ENSCING00000024877-10075.000ENSPCOG00000003309-10075.000Propithecus_coquereli
ENSCING00000024877-8876.190ENSPVAG00000000990LSM89976.190Pteropus_vampyrus
ENSCING00000024877-10075.000ENSPNYG00000011448lsm810075.000Pundamilia_nyererei
ENSCING00000024877-10075.000ENSPNAG00000010252lsm810075.000Pygocentrus_nattereri
ENSCING00000024877-10075.000ENSRNOG00000058677Lsm810075.000Rattus_norvegicus
ENSCING00000024877-10075.000ENSRBIG00000032851LSM810077.027Rhinopithecus_bieti
ENSCING00000024877-10075.000ENSRROG00000039618LSM810077.027Rhinopithecus_roxellana
ENSCING00000024877-10075.000ENSSBOG00000023223LSM810077.027Saimiri_boliviensis_boliviensis
ENSCING00000024877-10075.000ENSSHAG00000018435-10075.000Sarcophilus_harrisii
ENSCING00000024877-10076.042ENSSFOG00015004412lsm810076.042Scleropages_formosus
ENSCING00000024877-7878.667ENSSMAG00000009458lsm810078.667Scophthalmus_maximus
ENSCING00000024877-10075.000ENSSDUG00000014702lsm810075.000Seriola_dumerili
ENSCING00000024877-7878.667ENSSLDG00000016870lsm810078.667Seriola_lalandi_dorsalis
ENSCING00000024877-7579.167ENSSARG00000009628-10079.167Sorex_araneus
ENSCING00000024877-10075.000ENSSPUG00000017419LSM810075.000Sphenodon_punctatus
ENSCING00000024877-10075.000ENSSPAG00000021422lsm810075.000Stegastes_partitus
ENSCING00000024877-10075.000ENSSSCG00000021652LSM810075.000Sus_scrofa
ENSCING00000024877-10075.000ENSTGUG00000004730-10075.000Taeniopygia_guttata
ENSCING00000024877-10075.000ENSTGUG00000016823-10075.000Taeniopygia_guttata
ENSCING00000024877-10075.000ENSTRUG00000025192lsm810075.000Takifugu_rubripes
ENSCING00000024877-10075.000ENSTNIG00000002864lsm810075.000Tetraodon_nigroviridis
ENSCING00000024877-10075.000ENSTTRG00000001023LSM810075.000Tursiops_truncatus
ENSCING00000024877-9275.000ENSUAMG00000006943-9275.000Ursus_americanus
ENSCING00000024877-9275.000ENSUMAG00000003073LSM89475.000Ursus_maritimus
ENSCING00000024877-10075.000ENSVPAG00000001530LSM810075.000Vicugna_pacos
ENSCING00000024877-7880.000ENSVVUG00000013248-8280.000Vulpes_vulpes
ENSCING00000024877-9273.864ENSXETG00000021829lsm89173.864Xenopus_tropicalis
ENSCING00000024877-10071.875ENSXCOG00000012938lsm810071.875Xiphophorus_couchianus
ENSCING00000024877-10073.958ENSXMAG00000025919lsm810073.958Xiphophorus_maculatus

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