EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000024984 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1768 bases
Position: chrHT000103.1:103064-104831
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035773	LSM	PF01423.22	5.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032189	-	781	-	ENSCINP00000035773	115 (aa)	-	H2Y1I9

Gene Model

Click here to download ENSCING00000024984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000024984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000024984	-	83	30.208	ENSCAPG00000012567	LSM10	78	30.208	Cavia_aperea
ENSCING00000024984	-	83	30.208	ENSCPOG00000039302	LSM10	78	30.208	Cavia_porcellus
ENSCING00000024984	-	97	61.947	ENSCSAVG00000001896	-	97	61.947	Ciona_savignyi
ENSCING00000024984	-	73	30.233	ENSCGRG00001022673	-	70	30.233	Cricetulus_griseus_chok1gshd
ENSCING00000024984	-	73	30.233	ENSCGRG00000015514	-	70	30.233	Cricetulus_griseus_crigri
ENSCING00000024984	-	71	33.735	ENSDARG00000109563	CABZ01074453.1	98	33.735	Danio_rerio
ENSCING00000024984	-	85	37.755	ENSDARG00000101222	oscp1a	82	37.755	Danio_rerio
ENSCING00000024984	-	83	30.526	ENSELUG00000007452	oscp1a	78	30.526	Esox_lucius
ENSCING00000024984	-	76	31.034	ENSFHEG00000001058	oscp1a	75	31.034	Fundulus_heteroclitus
ENSCING00000024984	-	83	30.208	ENSGGOG00000003556	LSM10	78	30.208	Gorilla_gorilla
ENSCING00000024984	-	83	30.208	ENSHGLG00000011625	LSM10	78	30.208	Heterocephalus_glaber_female
ENSCING00000024984	-	83	30.208	ENSHGLG00100001769	LSM10	78	30.208	Heterocephalus_glaber_male
ENSCING00000024984	-	97	31.405	ENSLACG00000015904	LSM10	93	31.405	Latimeria_chalumnae
ENSCING00000024984	-	85	31.633	ENSLOCG00000018277	oscp1a	80	31.633	Lepisosteus_oculatus
ENSCING00000024984	-	83	30.208	ENSMLUG00000023895	LSM10	78	30.208	Myotis_lucifugus
ENSCING00000024984	-	83	30.208	ENSOANG00000002066	LSM10	78	30.208	Ornithorhynchus_anatinus
ENSCING00000024984	-	83	30.208	ENSOGAG00000002653	LSM10	78	30.208	Otolemur_garnettii
ENSCING00000024984	-	83	34.375	ENSPKIG00000003728	oscp1a	77	34.375	Paramormyrops_kingsleyae
ENSCING00000024984	-	62	32.394	ENSPMGG00000015718	oscp1a	92	32.394	Periophthalmus_magnuspinnatus
ENSCING00000024984	-	83	31.579	ENSPNAG00000028829	oscp1a	79	31.579	Pygocentrus_nattereri
ENSCING00000024984	-	81	34.409	ENSSFOG00015019954	lsm10	76	34.409	Scleropages_formosus
ENSCING00000024984	-	83	30.526	ENSSMAG00000001297	oscp1a	81	30.526	Scophthalmus_maximus