EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000000080 (Gene tree)
Gene ID: 100403375
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 99605 bases
Position: chrNTIC01007779.1:65706888-65806492
Accession: 100403375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000050394	ResIII	PF04851.15	1.4e-11	1	1
ENSCJAP00000000151	ResIII	PF04851.15	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000000160	-	900	-	ENSCJAP00000000152	299 (aa)	XP_002759129	F7EIZ6
ENSCJAT00000062747	-	3390	-	ENSCJAP00000050394	725 (aa)	XP_008981161	F7EYN9
ENSCJAT00000000159	-	2733	XM_008982908	ENSCJAP00000000151	910 (aa)	XP_008981156	F7EJ02
ENSCJAT00000056648	-	357	-	ENSCJAP00000048329	118 (aa)	-	F7GT30

Gene Model

Click here to download ENSCJAG00000000080's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000000080's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000000080	-	79	46.599	ENSCJAG00000021080	RAD54L	70	53.333
ENSCJAG00000000080	-	58	39.216	ENSCJAG00000015819	HELLS	58	39.216
ENSCJAG00000000080	-	69	32.233	ENSCJAG00000002406	CHD1L	52	32.233
ENSCJAG00000000080	-	74	32.280	ENSCJAG00000008862	ERCC6L2	82	32.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000000080	-	100	96.694	ENSG00000197275	RAD54B	100	95.170	Homo_sapiens
ENSCJAG00000000080	-	100	96.694	ENSG00000265817	FSBP	100	96.694	Homo_sapiens
ENSCJAG00000000080	-	99	88.690	ENSAMEG00000005834	-	99	85.730	Ailuropoda_melanoleuca
ENSCJAG00000000080	-	99	58.219	ENSACIG00000013005	rad54b	99	54.744	Amphilophus_citrinellus
ENSCJAG00000000080	-	99	59.264	ENSAOCG00000008523	rad54b	99	54.915	Amphiprion_ocellaris
ENSCJAG00000000080	-	99	58.550	ENSAPEG00000001673	rad54b	99	55.677	Amphiprion_percula
ENSCJAG00000000080	-	99	58.060	ENSATEG00000001527	rad54b	99	54.853	Anabas_testudineus
ENSCJAG00000000080	-	99	75.242	ENSAPLG00000014366	-	99	69.089	Anas_platyrhynchos
ENSCJAG00000000080	-	100	70.604	ENSACAG00000003671	-	99	70.891	Anolis_carolinensis
ENSCJAG00000000080	-	89	97.222	ENSANAG00000019528	-	100	97.222	Aotus_nancymaae
ENSCJAG00000000080	-	99	58.082	ENSACLG00000007826	rad54b	99	54.317	Astatotilapia_calliptera
ENSCJAG00000000080	-	99	57.476	ENSAMXG00000039985	rad54b	95	57.803	Astyanax_mexicanus
ENSCJAG00000000080	-	99	86.878	ENSBTAG00000000632	RAD54B	99	84.488	Bos_taurus
ENSCJAG00000000080	-	85	36.499	WBGene00013792	Y116A8C.13	97	33.998	Caenorhabditis_elegans
ENSCJAG00000000080	-	99	86.897	ENSCAFG00000009179	RAD54B	99	83.205	Canis_familiaris
ENSCJAG00000000080	-	99	86.759	ENSCAFG00020012084	-	99	83.095	Canis_lupus_dingo
ENSCJAG00000000080	-	99	86.740	ENSCHIG00000008230	-	99	84.158	Capra_hircus
ENSCJAG00000000080	-	99	89.517	ENSTSYG00000013234	-	99	88.352	Carlito_syrichta
ENSCJAG00000000080	-	99	86.878	ENSCPOG00000011643	-	99	82.728	Cavia_porcellus
ENSCJAG00000000080	-	100	99.172	ENSCCAG00000011754	-	100	99.172	Cebus_capucinus
ENSCJAG00000000080	-	100	96.000	ENSCATG00000030661	-	100	96.000	Cercocebus_atys
ENSCJAG00000000080	-	100	86.777	ENSCLAG00000010476	-	100	83.425	Chinchilla_lanigera
ENSCJAG00000000080	-	100	95.724	ENSCSAG00000012712	-	100	94.066	Chlorocebus_sabaeus
ENSCJAG00000000080	-	100	75.962	ENSCPBG00000003204	-	99	70.843	Chrysemys_picta_bellii
ENSCJAG00000000080	-	100	95.862	ENSCANG00000017939	-	100	95.862	Colobus_angolensis_palliatus
ENSCJAG00000000080	-	99	82.597	ENSCGRG00001020184	Rad54b	99	78.658	Cricetulus_griseus_chok1gshd
ENSCJAG00000000080	-	99	81.215	ENSCGRG00000016752	Rad54b	99	77.338	Cricetulus_griseus_crigri
ENSCJAG00000000080	-	99	57.793	ENSCSEG00000001601	rad54b	97	61.538	Cynoglossus_semilaevis
ENSCJAG00000000080	-	99	60.192	ENSCVAG00000009200	rad54b	99	56.148	Cyprinodon_variegatus
ENSCJAG00000000080	-	99	57.909	ENSDARG00000092134	rad54b	99	60.462	Danio_rerio
ENSCJAG00000000080	-	99	86.777	ENSDNOG00000015535	-	99	83.864	Dasypus_novemcinctus
ENSCJAG00000000080	-	99	87.569	ENSDORG00000002492	Rad54b	99	83.187	Dipodomys_ordii
ENSCJAG00000000080	-	83	86.755	ENSETEG00000010605	-	100	81.749	Echinops_telfairi
ENSCJAG00000000080	-	99	49.322	ENSEBUG00000009104	rad54b	98	46.383	Eptatretus_burgeri
ENSCJAG00000000080	-	99	86.483	ENSEASG00005004021	-	99	84.824	Equus_asinus_asinus
ENSCJAG00000000080	-	99	86.897	ENSECAG00000021949	-	99	85.385	Equus_caballus
ENSCJAG00000000080	-	88	80.000	ENSEEUG00000008056	-	83	80.000	Erinaceus_europaeus
ENSCJAG00000000080	-	99	58.872	ENSELUG00000009287	rad54b	99	53.613	Esox_lucius
ENSCJAG00000000080	-	99	88.828	ENSFCAG00000015513	-	99	88.828	Felis_catus
ENSCJAG00000000080	-	99	74.689	ENSFALG00000005467	-	99	68.988	Ficedula_albicollis
ENSCJAG00000000080	-	98	88.136	ENSFDAG00000020541	-	100	85.039	Fukomys_damarensis
ENSCJAG00000000080	-	99	57.760	ENSFHEG00000014382	rad54b	98	53.905	Fundulus_heteroclitus
ENSCJAG00000000080	-	99	55.556	ENSGMOG00000014774	rad54b	98	56.713	Gadus_morhua
ENSCJAG00000000080	-	100	73.764	ENSGALG00000043597	RAD54B	99	67.791	Gallus_gallus
ENSCJAG00000000080	-	99	58.904	ENSGAFG00000007901	rad54b	99	54.913	Gambusia_affinis
ENSCJAG00000000080	-	99	58.808	ENSGACG00000009128	rad54b	99	55.091	Gasterosteus_aculeatus
ENSCJAG00000000080	-	100	75.549	ENSGAGG00000018747	-	99	70.403	Gopherus_agassizii
ENSCJAG00000000080	-	99	96.547	ENSGGOG00000023516	-	99	94.609	Gorilla_gorilla
ENSCJAG00000000080	-	99	57.923	ENSHBUG00000016017	rad54b	99	53.583	Haplochromis_burtoni
ENSCJAG00000000080	-	99	85.753	ENSHGLG00000008263	RAD54B	99	82.951	Heterocephalus_glaber_female
ENSCJAG00000000080	-	99	84.647	ENSHGLG00100008108	-	99	82.193	Heterocephalus_glaber_male
ENSCJAG00000000080	-	99	56.831	ENSHCOG00000004764	rad54b	98	55.995	Hippocampus_comes
ENSCJAG00000000080	-	99	57.629	ENSIPUG00000018531	rad54b	99	52.256	Ictalurus_punctatus
ENSCJAG00000000080	-	99	87.083	ENSSTOG00000010791	-	99	83.775	Ictidomys_tridecemlineatus
ENSCJAG00000000080	-	99	84.966	ENSJJAG00000010314	Rad54b	99	81.209	Jaculus_jaculus
ENSCJAG00000000080	-	99	56.927	ENSKMAG00000004744	rad54b	99	52.954	Kryptolebias_marmoratus
ENSCJAG00000000080	-	99	69.475	ENSLACG00000000859	-	100	69.733	Latimeria_chalumnae
ENSCJAG00000000080	-	99	63.361	ENSLOCG00000010100	rad54b	96	62.637	Lepisosteus_oculatus
ENSCJAG00000000080	-	100	87.052	ENSLAFG00000015315	-	100	84.035	Loxodonta_africana
ENSCJAG00000000080	-	100	95.862	ENSMFAG00000031629	-	100	95.862	Macaca_fascicularis
ENSCJAG00000000080	-	100	95.862	ENSMMUG00000005659	-	100	94.286	Macaca_mulatta
ENSCJAG00000000080	-	100	95.724	ENSMNEG00000016408	-	100	94.066	Macaca_nemestrina
ENSCJAG00000000080	-	100	96.138	ENSMLEG00000006946	-	100	94.396	Mandrillus_leucophaeus
ENSCJAG00000000080	-	99	58.378	ENSMAMG00000012269	rad54b	99	55.568	Mastacembelus_armatus
ENSCJAG00000000080	-	99	58.219	ENSMZEG00005005281	rad54b	96	58.509	Maylandia_zebra
ENSCJAG00000000080	-	100	73.901	ENSMGAG00000012024	-	99	68.065	Meleagris_gallopavo
ENSCJAG00000000080	-	99	82.320	ENSMAUG00000013586	Rad54b	99	78.328	Mesocricetus_auratus
ENSCJAG00000000080	-	99	89.517	ENSMICG00000000754	-	99	83.297	Microcebus_murinus
ENSCJAG00000000080	-	99	80.690	ENSMOCG00000020035	Rad54b	99	76.923	Microtus_ochrogaster
ENSCJAG00000000080	-	99	57.613	ENSMMOG00000003394	rad54b	99	54.022	Mola_mola
ENSCJAG00000000080	-	99	78.207	ENSMODG00000007343	-	99	76.149	Monodelphis_domestica
ENSCJAG00000000080	-	89	58.942	ENSMALG00000001520	rad54b	99	58.942	Monopterus_albus
ENSCJAG00000000080	-	99	81.768	MGP_CAROLIEiJ_G0025810	Rad54b	99	77.558	Mus_caroli
ENSCJAG00000000080	-	99	81.466	ENSMUSG00000078773	Rad54b	99	77.313	Mus_musculus
ENSCJAG00000000080	-	99	82.158	MGP_PahariEiJ_G0023933	Rad54b	99	77.643	Mus_pahari
ENSCJAG00000000080	-	99	82.320	MGP_SPRETEiJ_G0026758	Rad54b	99	77.998	Mus_spretus
ENSCJAG00000000080	-	99	87.172	ENSMPUG00000008878	-	99	86.156	Mustela_putorius_furo
ENSCJAG00000000080	-	100	87.603	ENSMLUG00000008953	-	100	83.224	Myotis_lucifugus
ENSCJAG00000000080	-	99	85.460	ENSNGAG00000017537	Rad54b	99	81.838	Nannospalax_galili
ENSCJAG00000000080	-	99	58.299	ENSNBRG00000013394	rad54b	99	54.694	Neolamprologus_brichardi
ENSCJAG00000000080	-	100	96.143	ENSNLEG00000003062	-	99	96.143	Nomascus_leucogenys
ENSCJAG00000000080	-	78	78.261	ENSMEUG00000012426	-	83	71.371	Notamacropus_eugenii
ENSCJAG00000000080	-	95	86.006	ENSODEG00000002650	-	95	85.317	Octodon_degus
ENSCJAG00000000080	-	99	85.615	ENSODEG00000019564	-	99	82.599	Octodon_degus
ENSCJAG00000000080	-	99	58.276	ENSONIG00000006067	rad54b	99	55.184	Oreochromis_niloticus
ENSCJAG00000000080	-	99	77.029	ENSOANG00000011348	-	99	76.995	Ornithorhynchus_anatinus
ENSCJAG00000000080	-	99	88.828	ENSOCUG00000016478	-	99	84.396	Oryctolagus_cuniculus
ENSCJAG00000000080	-	99	59.754	ENSORLG00000008918	rad54b	99	62.287	Oryzias_latipes
ENSCJAG00000000080	-	89	62.442	ENSORLG00020012171	rad54b	99	62.442	Oryzias_latipes_hni
ENSCJAG00000000080	-	99	59.324	ENSORLG00015018536	rad54b	99	54.584	Oryzias_latipes_hsok
ENSCJAG00000000080	-	99	59.508	ENSOMEG00000004345	rad54b	99	60.129	Oryzias_melastigma
ENSCJAG00000000080	-	99	88.690	ENSOGAG00000007854	-	99	86.264	Otolemur_garnettii
ENSCJAG00000000080	-	99	86.464	ENSOARG00000007691	-	99	85.926	Ovis_aries
ENSCJAG00000000080	-	100	94.490	ENSPPAG00000029572	-	100	93.194	Pan_paniscus
ENSCJAG00000000080	-	99	88.966	ENSPPRG00000007571	-	99	88.966	Panthera_pardus
ENSCJAG00000000080	-	99	88.966	ENSPTIG00000012670	-	99	88.966	Panthera_tigris_altaica
ENSCJAG00000000080	-	100	96.419	ENSPTRG00000020427	-	100	96.419	Pan_troglodytes
ENSCJAG00000000080	-	100	96.138	ENSPANG00000019566	-	100	94.505	Papio_anubis
ENSCJAG00000000080	-	99	62.881	ENSPKIG00000014974	rad54b	99	58.433	Paramormyrops_kingsleyae
ENSCJAG00000000080	-	100	73.764	ENSPSIG00000002383	-	98	73.168	Pelodiscus_sinensis
ENSCJAG00000000080	-	99	81.906	ENSPEMG00000012133	Rad54b	99	78.438	Peromyscus_maniculatus_bairdii
ENSCJAG00000000080	-	100	57.995	ENSPMAG00000002916	rad54b	99	58.479	Petromyzon_marinus
ENSCJAG00000000080	-	100	79.063	ENSPCIG00000020151	-	94	76.770	Phascolarctos_cinereus
ENSCJAG00000000080	-	99	59.673	ENSPFOG00000023411	rad54b	99	54.555	Poecilia_formosa
ENSCJAG00000000080	-	99	59.673	ENSPLAG00000010430	rad54b	99	54.767	Poecilia_latipinna
ENSCJAG00000000080	-	99	59.781	ENSPMEG00000016873	rad54b	95	59.803	Poecilia_mexicana
ENSCJAG00000000080	-	99	59.699	ENSPREG00000018443	rad54b	99	54.459	Poecilia_reticulata
ENSCJAG00000000080	-	100	96.006	ENSPPYG00000018750	-	100	94.621	Pongo_abelii
ENSCJAG00000000080	-	99	89.517	ENSPCOG00000026845	-	99	89.517	Propithecus_coquereli
ENSCJAG00000000080	-	99	88.828	ENSPVAG00000000261	-	92	88.799	Pteropus_vampyrus
ENSCJAG00000000080	-	99	58.322	ENSPNYG00000018303	rad54b	96	59.189	Pundamilia_nyererei
ENSCJAG00000000080	-	99	58.095	ENSPNAG00000000295	rad54b	100	53.970	Pygocentrus_nattereri
ENSCJAG00000000080	-	99	79.420	ENSRNOG00000039949	Rad54b	99	74.807	Rattus_norvegicus
ENSCJAG00000000080	-	100	95.448	ENSRBIG00000020419	-	100	94.066	Rhinopithecus_bieti
ENSCJAG00000000080	-	100	95.448	ENSRROG00000039897	-	100	94.066	Rhinopithecus_roxellana
ENSCJAG00000000080	-	77	42.998	YBR073W	RDH54	61	42.998	Saccharomyces_cerevisiae
ENSCJAG00000000080	-	100	98.897	ENSSBOG00000028501	-	100	98.242	Saimiri_boliviensis_boliviensis
ENSCJAG00000000080	-	100	79.752	ENSSHAG00000017038	-	100	73.742	Sarcophilus_harrisii
ENSCJAG00000000080	-	79	65.789	ENSSFOG00015008483	rad54b	88	65.789	Scleropages_formosus
ENSCJAG00000000080	-	99	58.379	ENSSMAG00000018659	rad54b	99	54.286	Scophthalmus_maximus
ENSCJAG00000000080	-	98	59.198	ENSSDUG00000001122	rad54b	98	54.180	Seriola_dumerili
ENSCJAG00000000080	-	99	59.285	ENSSLDG00000013787	rad54b	99	54.040	Seriola_lalandi_dorsalis
ENSCJAG00000000080	-	100	73.352	ENSSPUG00000016497	-	99	68.122	Sphenodon_punctatus
ENSCJAG00000000080	-	99	58.936	ENSSPAG00000012800	rad54b	99	55.229	Stegastes_partitus
ENSCJAG00000000080	-	100	86.759	ENSSSCG00000006101	-	99	86.608	Sus_scrofa
ENSCJAG00000000080	-	99	74.207	ENSTGUG00000011880	-	99	67.822	Taeniopygia_guttata
ENSCJAG00000000080	-	99	58.550	ENSTRUG00000010015	rad54b	99	53.417	Takifugu_rubripes
ENSCJAG00000000080	-	99	82.988	ENSTTRG00000006312	-	99	81.958	Tursiops_truncatus
ENSCJAG00000000080	-	99	88.828	ENSUMAG00000016401	-	99	85.840	Ursus_maritimus
ENSCJAG00000000080	-	99	87.552	ENSVPAG00000003157	-	99	83.590	Vicugna_pacos
ENSCJAG00000000080	-	99	58.379	ENSXETG00000025924	rad54b	99	59.426	Xenopus_tropicalis
ENSCJAG00000000080	-	99	58.687	ENSXMAG00000013141	rad54b	99	55.022	Xiphophorus_maculatus