EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000000193 (Gene tree)
Gene ID: 100392779
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 19709 bases
Position: chrNTIC01011113.1:46429511-46449219
Accession: 11150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064278	RRM_1	PF00076.22	3e-18	1	1
ENSCJAP00000000338	RRM_1	PF00076.22	8e-18	1	1
ENSCJAP00000054522	RRM_1	PF00076.22	1.8e-13	1	1
ENSCJAP00000000345	RRM_1	PF00076.22	1.2e-11	1	1
ENSCJAP00000054522	U1snRNP70_N	PF12220.8	1.1e-28	1	1
ENSCJAP00000064278	U1snRNP70_N	PF12220.8	5.1e-28	1	1
ENSCJAP00000000345	U1snRNP70_N	PF12220.8	9.5e-28	1	1
ENSCJAP00000000338	U1snRNP70_N	PF12220.8	1.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000000376	SNRNP70-203	1044	-	ENSCJAP00000000345	347 (aa)	-	F7HJ67
ENSCJAT00000067554	SNRNP70-204	501	-	ENSCJAP00000054522	166 (aa)	-	A0A2R8MTZ2
ENSCJAT00000000365	SNRNP70-202	1317	-	ENSCJAP00000000338	438 (aa)	-	F7D867
ENSCJAT00000068098	SNRNP70-201	765	-	ENSCJAP00000064278	254 (aa)	-	A0A2R8MSC6

Gene Model

Click here to download ENSCJAG00000000193's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000000193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000000193	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSCJAG00000000193	SNRNP70	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSCJAG00000000193	SNRNP70	99	97.561	ENSAMEG00000014468	SNRNP70	100	92.290	Ailuropoda_melanoleuca
ENSCJAG00000000193	SNRNP70	99	89.634	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSCJAG00000000193	SNRNP70	99	93.902	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSCJAG00000000193	SNRNP70	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSCJAG00000000193	SNRNP70	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSCJAG00000000193	SNRNP70	99	50.303	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSCJAG00000000193	SNRNP70	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSCJAG00000000193	SNRNP70	100	95.937	ENSCAFG00020025470	SNRNP70	100	95.937	Canis_lupus_dingo
ENSCJAG00000000193	SNRNP70	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSCJAG00000000193	SNRNP70	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSCJAG00000000193	SNRNP70	99	98.814	ENSCPOG00000019589	SNRNP70	100	96.606	Cavia_porcellus
ENSCJAG00000000193	SNRNP70	89	99.486	ENSCCAG00000036551	SNRNP70	100	99.486	Cebus_capucinus
ENSCJAG00000000193	SNRNP70	100	99.087	ENSCATG00000016149	SNRNP70	100	99.087	Cercocebus_atys
ENSCJAG00000000193	SNRNP70	99	98.814	ENSCLAG00000007991	SNRNP70	100	97.722	Chinchilla_lanigera
ENSCJAG00000000193	SNRNP70	100	97.032	ENSCSAG00000002759	SNRNP70	100	97.032	Chlorocebus_sabaeus
ENSCJAG00000000193	SNRNP70	99	96.341	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSCJAG00000000193	SNRNP70	96	66.875	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSCJAG00000000193	SNRNP70	100	98.861	ENSCANG00000036607	SNRNP70	100	98.861	Colobus_angolensis_palliatus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSCGRG00001020676	Snrnp70	100	95.302	Cricetulus_griseus_chok1gshd
ENSCJAG00000000193	SNRNP70	99	98.814	ENSCGRG00000018048	Snrnp70	100	95.302	Cricetulus_griseus_crigri
ENSCJAG00000000193	SNRNP70	99	88.415	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSCJAG00000000193	SNRNP70	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSCJAG00000000193	SNRNP70	99	86.585	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSCJAG00000000193	SNRNP70	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSDORG00000010228	Snrnp70	100	95.495	Dipodomys_ordii
ENSCJAG00000000193	SNRNP70	99	60.366	FBgn0016978	snRNP-U1-70K	58	59.696	Drosophila_melanogaster
ENSCJAG00000000193	SNRNP70	74	100.000	ENSETEG00000005009	SNRNP70	74	100.000	Echinops_telfairi
ENSCJAG00000000193	SNRNP70	99	98.814	ENSEASG00005004917	SNRNP70	100	97.500	Equus_asinus_asinus
ENSCJAG00000000193	SNRNP70	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSCJAG00000000193	SNRNP70	100	82.688	ENSEEUG00000005666	SNRNP70	100	81.777	Erinaceus_europaeus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSFCAG00000042603	SNRNP70	100	91.136	Felis_catus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSFDAG00000013830	SNRNP70	96	99.682	Fukomys_damarensis
ENSCJAG00000000193	SNRNP70	99	87.805	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSCJAG00000000193	SNRNP70	99	88.415	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSCJAG00000000193	SNRNP70	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSCJAG00000000193	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSCJAG00000000193	SNRNP70	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSCJAG00000000193	SNRNP70	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSJJAG00000002614	Snrnp70	100	92.601	Jaculus_jaculus
ENSCJAG00000000193	SNRNP70	99	97.561	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSCJAG00000000193	SNRNP70	100	99.087	ENSMFAG00000039824	SNRNP70	100	99.087	Macaca_fascicularis
ENSCJAG00000000193	SNRNP70	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSCJAG00000000193	SNRNP70	100	98.847	ENSMNEG00000038057	SNRNP70	100	98.847	Macaca_nemestrina
ENSCJAG00000000193	SNRNP70	100	99.087	ENSMLEG00000030967	SNRNP70	100	99.087	Mandrillus_leucophaeus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSMAUG00000020970	Snrnp70	100	95.516	Mesocricetus_auratus
ENSCJAG00000000193	SNRNP70	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSMOCG00000012825	Snrnp70	100	92.428	Microtus_ochrogaster
ENSCJAG00000000193	SNRNP70	75	76.418	ENSMODG00000023381	SNRNP70	100	79.701	Monodelphis_domestica
ENSCJAG00000000193	SNRNP70	99	98.814	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSCJAG00000000193	SNRNP70	99	98.814	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSCJAG00000000193	SNRNP70	99	98.814	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSCJAG00000000193	SNRNP70	99	98.814	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSMPUG00000003258	SNRNP70	100	97.727	Mustela_putorius_furo
ENSCJAG00000000193	SNRNP70	99	98.814	ENSMLUG00000011766	SNRNP70	100	97.727	Myotis_lucifugus
ENSCJAG00000000193	SNRNP70	99	98.419	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSCJAG00000000193	SNRNP70	99	89.024	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSCJAG00000000193	SNRNP70	99	99.074	ENSNLEG00000004899	SNRNP70	100	99.074	Nomascus_leucogenys
ENSCJAG00000000193	SNRNP70	80	83.668	ENSMEUG00000015650	SNRNP70	55	98.438	Notamacropus_eugenii
ENSCJAG00000000193	SNRNP70	99	98.814	ENSODEG00000017499	SNRNP70	100	92.857	Octodon_degus
ENSCJAG00000000193	SNRNP70	99	88.415	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSCJAG00000000193	SNRNP70	99	96.951	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSOCUG00000015081	SNRNP70	81	92.683	Oryctolagus_cuniculus
ENSCJAG00000000193	SNRNP70	99	98.425	ENSOGAG00000029310	SNRNP70	100	97.059	Otolemur_garnettii
ENSCJAG00000000193	SNRNP70	99	97.561	ENSOARG00000012608	SNRNP70	93	100.000	Ovis_aries
ENSCJAG00000000193	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSPPRG00000005579	SNRNP70	100	97.727	Panthera_pardus
ENSCJAG00000000193	SNRNP70	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSCJAG00000000193	SNRNP70	100	99.087	ENSPANG00000004068	SNRNP70	100	99.087	Papio_anubis
ENSCJAG00000000193	SNRNP70	96	80.503	ENSPKIG00000019992	snrnp70	86	79.012	Paramormyrops_kingsleyae
ENSCJAG00000000193	SNRNP70	98	96.296	ENSPSIG00000015251	SNRNP70	90	86.087	Pelodiscus_sinensis
ENSCJAG00000000193	SNRNP70	96	90.566	ENSPMGG00000010153	snrnp70	77	90.062	Periophthalmus_magnuspinnatus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSPEMG00000019011	Snrnp70	100	94.667	Peromyscus_maniculatus_bairdii
ENSCJAG00000000193	SNRNP70	99	79.878	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSCJAG00000000193	SNRNP70	99	97.561	ENSPCIG00000007296	SNRNP70	65	100.000	Phascolarctos_cinereus
ENSCJAG00000000193	SNRNP70	100	98.630	ENSPPYG00000010234	SNRNP70	100	98.630	Pongo_abelii
ENSCJAG00000000193	SNRNP70	99	85.976	ENSPCOG00000023103	SNRNP70	100	90.337	Propithecus_coquereli
ENSCJAG00000000193	SNRNP70	100	94.091	ENSPVAG00000009578	SNRNP70	100	92.273	Pteropus_vampyrus
ENSCJAG00000000193	SNRNP70	99	75.000	ENSPNAG00000017453	snrnp70	52	67.886	Pygocentrus_nattereri
ENSCJAG00000000193	SNRNP70	100	98.858	ENSRBIG00000042387	SNRNP70	100	98.858	Rhinopithecus_bieti
ENSCJAG00000000193	SNRNP70	100	99.087	ENSRROG00000033636	SNRNP70	100	99.087	Rhinopithecus_roxellana
ENSCJAG00000000193	SNRNP70	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000000193	SNRNP70	99	97.561	ENSSHAG00000002194	SNRNP70	65	100.000	Sarcophilus_harrisii
ENSCJAG00000000193	SNRNP70	99	89.024	ENSSFOG00015004562	snrnp70	53	85.830	Scleropages_formosus
ENSCJAG00000000193	SNRNP70	100	94.578	ENSSPUG00000016621	SNRNP70	52	98.649	Sphenodon_punctatus
ENSCJAG00000000193	SNRNP70	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSCJAG00000000193	SNRNP70	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSCJAG00000000193	SNRNP70	99	98.814	ENSTTRG00000017099	SNRNP70	100	97.052	Tursiops_truncatus
ENSCJAG00000000193	SNRNP70	99	98.814	ENSUAMG00000016147	SNRNP70	100	97.727	Ursus_americanus
ENSCJAG00000000193	SNRNP70	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSCJAG00000000193	SNRNP70	79	99.237	ENSVPAG00000005959	-	100	80.995	Vicugna_pacos
ENSCJAG00000000193	SNRNP70	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes
ENSCJAG00000000193	SNRNP70	99	93.293	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis