EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000000363 (Gene tree)
Gene ID: 100410048
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 54347 bases
Position: chrNTIC01008890.1:18591373-18645719
Accession: 100410048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000000643	GTP_EFTU	PF00009.27	8.2e-63	1	1
ENSCJAP00000000626	GTP_EFTU	PF00009.27	1.3e-62	1	1
ENSCJAP00000000643	GTP_EFTU_D2	PF03144.25	4.6e-17	1	1
ENSCJAP00000000626	GTP_EFTU_D2	PF03144.25	4.9e-17	1	1
ENSCJAP00000000643	EFG_IV	PF03764.18	9.9e-35	1	1
ENSCJAP00000000626	EFG_IV	PF03764.18	1.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000000673	GFM1-202	2313	-	ENSCJAP00000000626	770 (aa)	-	F6QLF2
ENSCJAT00000000690	GFM1-201	2470	-	ENSCJAP00000000643	751 (aa)	XP_002807701	F6QKI2

Gene Model

Click here to download ENSCJAG00000000363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000000363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000000363	GFM1	84	45.183	ENSCJAG00000016802	GFM2	91	34.247
ENSCJAG00000000363	GFM1	60	31.944	ENSCJAG00000012349	EFTUD2	50	33.333
ENSCJAG00000000363	GFM1	73	37.584	ENSCJAG00000015045	EEF2	73	37.584
ENSCJAG00000000363	GFM1	53	32.661	ENSCJAG00000019056	-	67	34.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000000363	GFM1	98	94.837	ENSG00000168827	GFM1	100	96.667	Homo_sapiens
ENSCJAG00000000363	GFM1	90	78.994	ENSAPOG00000016489	gfm1	96	79.372	Acanthochromis_polyacanthus
ENSCJAG00000000363	GFM1	97	92.445	ENSAMEG00000013542	GFM1	100	90.969	Ailuropoda_melanoleuca
ENSCJAG00000000363	GFM1	97	76.446	ENSACIG00000014465	gfm1	94	76.446	Amphilophus_citrinellus
ENSCJAG00000000363	GFM1	96	80.305	ENSAOCG00000006023	gfm1	96	80.305	Amphiprion_ocellaris
ENSCJAG00000000363	GFM1	96	80.305	ENSAPEG00000024499	gfm1	99	80.056	Amphiprion_percula
ENSCJAG00000000363	GFM1	100	78.429	ENSATEG00000013789	gfm1	100	78.429	Anabas_testudineus
ENSCJAG00000000363	GFM1	97	83.333	ENSAPLG00000005022	GFM1	100	83.333	Anas_platyrhynchos
ENSCJAG00000000363	GFM1	97	81.486	ENSACAG00000006829	GFM1	100	81.486	Anolis_carolinensis
ENSCJAG00000000363	GFM1	100	97.603	ENSANAG00000035983	GFM1	100	97.603	Aotus_nancymaae
ENSCJAG00000000363	GFM1	97	81.956	ENSACLG00000016586	gfm1	99	80.907	Astatotilapia_calliptera
ENSCJAG00000000363	GFM1	100	78.752	ENSAMXG00000013435	gfm1	96	80.556	Astyanax_mexicanus
ENSCJAG00000000363	GFM1	100	91.910	ENSBTAG00000027795	GFM1	100	91.910	Bos_taurus
ENSCJAG00000000363	GFM1	97	55.435	WBGene00009246	gfm-1	99	55.288	Caenorhabditis_elegans
ENSCJAG00000000363	GFM1	99	92.027	ENSCAFG00000009006	GFM1	100	93.195	Canis_familiaris
ENSCJAG00000000363	GFM1	98	92.412	ENSCAFG00020005878	GFM1	99	93.084	Canis_lupus_dingo
ENSCJAG00000000363	GFM1	100	92.175	ENSCHIG00000015220	GFM1	100	92.175	Capra_hircus
ENSCJAG00000000363	GFM1	100	92.563	ENSTSYG00000002013	GFM1	100	92.563	Carlito_syrichta
ENSCJAG00000000363	GFM1	97	81.181	ENSCAPG00000005699	GFM1	98	81.155	Cavia_aperea
ENSCJAG00000000363	GFM1	100	91.512	ENSCPOG00000001194	GFM1	100	91.512	Cavia_porcellus
ENSCJAG00000000363	GFM1	100	97.736	ENSCCAG00000025561	GFM1	100	97.736	Cebus_capucinus
ENSCJAG00000000363	GFM1	100	94.141	ENSCATG00000037622	GFM1	100	94.636	Cercocebus_atys
ENSCJAG00000000363	GFM1	98	90.934	ENSCLAG00000002503	GFM1	100	89.934	Chinchilla_lanigera
ENSCJAG00000000363	GFM1	100	94.141	ENSCSAG00000012162	GFM1	100	94.141	Chlorocebus_sabaeus
ENSCJAG00000000363	GFM1	100	82.759	ENSCHOG00000004867	GFM1	100	82.759	Choloepus_hoffmanni
ENSCJAG00000000363	GFM1	99	81.150	ENSCPBG00000018367	GFM1	99	81.150	Chrysemys_picta_bellii
ENSCJAG00000000363	GFM1	95	59.254	ENSCING00000011960	-	94	59.254	Ciona_intestinalis
ENSCJAG00000000363	GFM1	95	59.917	ENSCSAVG00000008514	-	99	59.917	Ciona_savignyi
ENSCJAG00000000363	GFM1	98	94.837	ENSCANG00000031714	GFM1	100	94.541	Colobus_angolensis_palliatus
ENSCJAG00000000363	GFM1	100	91.512	ENSCGRG00001022095	GFM1	100	91.512	Cricetulus_griseus_chok1gshd
ENSCJAG00000000363	GFM1	100	91.512	ENSCGRG00000012043	GFM1	100	91.512	Cricetulus_griseus_crigri
ENSCJAG00000000363	GFM1	96	76.356	ENSCSEG00000017088	gfm1	98	76.356	Cynoglossus_semilaevis
ENSCJAG00000000363	GFM1	96	82.940	ENSCVAG00000004126	gfm1	99	81.690	Cyprinodon_variegatus
ENSCJAG00000000363	GFM1	100	78.029	ENSDARG00000063624	gfm1	100	78.029	Danio_rerio
ENSCJAG00000000363	GFM1	54	91.443	ENSDNOG00000016385	-	100	91.443	Dasypus_novemcinctus
ENSCJAG00000000363	GFM1	100	88.594	ENSDORG00000014165	Gfm1	100	88.594	Dipodomys_ordii
ENSCJAG00000000363	GFM1	95	67.183	FBgn0263133	mEFG1	95	67.183	Drosophila_melanogaster
ENSCJAG00000000363	GFM1	98	82.432	ENSETEG00000019197	GFM1	100	81.746	Echinops_telfairi
ENSCJAG00000000363	GFM1	90	67.111	ENSEBUG00000012794	gfm1	99	67.111	Eptatretus_burgeri
ENSCJAG00000000363	GFM1	96	68.690	ENSEEUG00000000429	GFM1	99	68.690	Erinaceus_europaeus
ENSCJAG00000000363	GFM1	100	76.831	ENSELUG00000014728	gfm1	100	76.831	Esox_lucius
ENSCJAG00000000363	GFM1	98	92.818	ENSFCAG00000013291	GFM1	100	92.042	Felis_catus
ENSCJAG00000000363	GFM1	90	82.988	ENSFALG00000007619	GFM1	100	82.988	Ficedula_albicollis
ENSCJAG00000000363	GFM1	100	90.716	ENSFDAG00000016559	GFM1	100	90.716	Fukomys_damarensis
ENSCJAG00000000363	GFM1	97	81.680	ENSFHEG00000006091	gfm1	97	81.680	Fundulus_heteroclitus
ENSCJAG00000000363	GFM1	96	78.976	ENSGMOG00000010161	gfm1	99	78.976	Gadus_morhua
ENSCJAG00000000363	GFM1	97	82.329	ENSGALG00000009634	GFM1	99	82.329	Gallus_gallus
ENSCJAG00000000363	GFM1	97	81.680	ENSGAFG00000012527	gfm1	97	81.680	Gambusia_affinis
ENSCJAG00000000363	GFM1	99	77.394	ENSGACG00000009864	gfm1	99	77.394	Gasterosteus_aculeatus
ENSCJAG00000000363	GFM1	98	95.109	ENSGGOG00000003085	GFM1	100	94.807	Gorilla_gorilla
ENSCJAG00000000363	GFM1	97	82.094	ENSHBUG00000002120	gfm1	97	82.094	Haplochromis_burtoni
ENSCJAG00000000363	GFM1	100	91.114	ENSHGLG00000016855	GFM1	100	91.114	Heterocephalus_glaber_female
ENSCJAG00000000363	GFM1	100	91.114	ENSHGLG00100013049	GFM1	100	91.114	Heterocephalus_glaber_male
ENSCJAG00000000363	GFM1	99	79.223	ENSHCOG00000007638	gfm1	99	79.223	Hippocampus_comes
ENSCJAG00000000363	GFM1	100	77.763	ENSIPUG00000005873	gfm1	100	77.822	Ictalurus_punctatus
ENSCJAG00000000363	GFM1	98	90.921	ENSSTOG00000010150	GFM1	99	90.921	Ictidomys_tridecemlineatus
ENSCJAG00000000363	GFM1	100	90.451	ENSJJAG00000016447	Gfm1	100	90.451	Jaculus_jaculus
ENSCJAG00000000363	GFM1	97	79.063	ENSKMAG00000020768	gfm1	97	79.063	Kryptolebias_marmoratus
ENSCJAG00000000363	GFM1	93	80.199	ENSLBEG00000021315	gfm1	100	80.199	Labrus_bergylta
ENSCJAG00000000363	GFM1	100	79.095	ENSLACG00000012295	GFM1	100	79.095	Latimeria_chalumnae
ENSCJAG00000000363	GFM1	97	75.446	ENSLOCG00000003778	gfm1	99	75.446	Lepisosteus_oculatus
ENSCJAG00000000363	GFM1	99	88.533	ENSLAFG00000010945	GFM1	100	89.103	Loxodonta_africana
ENSCJAG00000000363	GFM1	100	94.674	ENSMFAG00000035731	GFM1	100	94.674	Macaca_fascicularis
ENSCJAG00000000363	GFM1	100	94.807	ENSMMUG00000004961	GFM1	100	94.807	Macaca_mulatta
ENSCJAG00000000363	GFM1	100	94.274	ENSMNEG00000033245	GFM1	100	94.274	Macaca_nemestrina
ENSCJAG00000000363	GFM1	96	94.886	ENSMLEG00000030908	GFM1	100	94.886	Mandrillus_leucophaeus
ENSCJAG00000000363	GFM1	100	79.095	ENSMAMG00000011760	gfm1	100	79.095	Mastacembelus_armatus
ENSCJAG00000000363	GFM1	97	82.094	ENSMZEG00005016639	gfm1	97	82.094	Maylandia_zebra
ENSCJAG00000000363	GFM1	97	82.345	ENSMGAG00000010641	GFM1	97	82.345	Meleagris_gallopavo
ENSCJAG00000000363	GFM1	100	91.910	ENSMAUG00000000611	Gfm1	100	91.910	Mesocricetus_auratus
ENSCJAG00000000363	GFM1	98	93.478	ENSMICG00000049086	GFM1	100	92.573	Microcebus_murinus
ENSCJAG00000000363	GFM1	100	91.489	ENSMOCG00000000465	Gfm1	100	91.489	Microtus_ochrogaster
ENSCJAG00000000363	GFM1	97	79.315	ENSMMOG00000012538	gfm1	98	79.315	Mola_mola
ENSCJAG00000000363	GFM1	98	86.296	ENSMODG00000015673	GFM1	99	86.296	Monodelphis_domestica
ENSCJAG00000000363	GFM1	99	79.139	ENSMALG00000012508	gfm1	99	79.139	Monopterus_albus
ENSCJAG00000000363	GFM1	100	90.981	MGP_CAROLIEiJ_G0025052	Gfm1	100	90.981	Mus_caroli
ENSCJAG00000000363	GFM1	100	91.114	ENSMUSG00000027774	Gfm1	100	91.114	Mus_musculus
ENSCJAG00000000363	GFM1	100	91.114	MGP_PahariEiJ_G0026495	Gfm1	100	91.114	Mus_pahari
ENSCJAG00000000363	GFM1	100	91.114	MGP_SPRETEiJ_G0025994	Gfm1	100	91.114	Mus_spretus
ENSCJAG00000000363	GFM1	100	91.247	ENSMPUG00000002859	GFM1	100	91.247	Mustela_putorius_furo
ENSCJAG00000000363	GFM1	100	92.706	ENSMLUG00000000452	GFM1	100	92.706	Myotis_lucifugus
ENSCJAG00000000363	GFM1	100	90.331	ENSNGAG00000012375	Gfm1	100	90.331	Nannospalax_galili
ENSCJAG00000000363	GFM1	97	81.931	ENSNBRG00000004631	gfm1	99	81.931	Neolamprologus_brichardi
ENSCJAG00000000363	GFM1	98	95.380	ENSNLEG00000004176	GFM1	100	95.073	Nomascus_leucogenys
ENSCJAG00000000363	GFM1	91	78.394	ENSMEUG00000007784	GFM1	100	78.394	Notamacropus_eugenii
ENSCJAG00000000363	GFM1	100	89.880	ENSOPRG00000009860	GFM1	100	89.880	Ochotona_princeps
ENSCJAG00000000363	GFM1	98	92.005	ENSODEG00000004316	GFM1	100	91.247	Octodon_degus
ENSCJAG00000000363	GFM1	97	82.094	ENSONIG00000003772	gfm1	97	82.094	Oreochromis_niloticus
ENSCJAG00000000363	GFM1	98	93.225	ENSOCUG00000013561	GFM1	100	92.440	Oryctolagus_cuniculus
ENSCJAG00000000363	GFM1	94	81.664	ENSORLG00000006487	gfm1	100	81.664	Oryzias_latipes
ENSCJAG00000000363	GFM1	97	80.992	ENSORLG00020003362	gfm1	97	80.992	Oryzias_latipes_hni
ENSCJAG00000000363	GFM1	97	80.579	ENSORLG00015005829	gfm1	97	80.579	Oryzias_latipes_hsok
ENSCJAG00000000363	GFM1	97	81.818	ENSOMEG00000012894	gfm1	97	81.818	Oryzias_melastigma
ENSCJAG00000000363	GFM1	100	91.379	ENSOGAG00000008298	GFM1	100	91.379	Otolemur_garnettii
ENSCJAG00000000363	GFM1	97	92.720	ENSOARG00000002409	GFM1	100	92.720	Ovis_aries
ENSCJAG00000000363	GFM1	98	95.109	ENSPPAG00000033881	GFM1	100	94.807	Pan_paniscus
ENSCJAG00000000363	GFM1	98	92.683	ENSPPRG00000009281	GFM1	100	91.910	Panthera_pardus
ENSCJAG00000000363	GFM1	98	92.547	ENSPTIG00000012416	GFM1	100	91.777	Panthera_tigris_altaica
ENSCJAG00000000363	GFM1	98	95.109	ENSPTRG00000015570	GFM1	100	94.807	Pan_troglodytes
ENSCJAG00000000363	GFM1	100	94.407	ENSPANG00000016512	GFM1	100	94.407	Papio_anubis
ENSCJAG00000000363	GFM1	97	81.129	ENSPKIG00000004876	gfm1	97	81.129	Paramormyrops_kingsleyae
ENSCJAG00000000363	GFM1	99	82.219	ENSPSIG00000012567	GFM1	99	82.219	Pelodiscus_sinensis
ENSCJAG00000000363	GFM1	96	79.750	ENSPMGG00000014068	gfm1	99	79.750	Periophthalmus_magnuspinnatus
ENSCJAG00000000363	GFM1	100	91.356	ENSPEMG00000008942	Gfm1	100	91.356	Peromyscus_maniculatus_bairdii
ENSCJAG00000000363	GFM1	85	85.000	ENSPCIG00000020195	GFM1	98	85.000	Phascolarctos_cinereus
ENSCJAG00000000363	GFM1	97	82.094	ENSPFOG00000011022	gfm1	97	82.094	Poecilia_formosa
ENSCJAG00000000363	GFM1	97	81.931	ENSPLAG00000019585	gfm1	97	81.014	Poecilia_latipinna
ENSCJAG00000000363	GFM1	97	81.956	ENSPMEG00000012376	gfm1	97	81.956	Poecilia_mexicana
ENSCJAG00000000363	GFM1	97	81.818	ENSPREG00000001332	gfm1	92	81.818	Poecilia_reticulata
ENSCJAG00000000363	GFM1	98	94.973	ENSPPYG00000014244	GFM1	100	94.674	Pongo_abelii
ENSCJAG00000000363	GFM1	94	87.624	ENSPCAG00000008934	GFM1	100	87.624	Procavia_capensis
ENSCJAG00000000363	GFM1	98	93.886	ENSPCOG00000022259	GFM1	100	92.971	Propithecus_coquereli
ENSCJAG00000000363	GFM1	100	92.308	ENSPVAG00000013605	GFM1	100	92.308	Pteropus_vampyrus
ENSCJAG00000000363	GFM1	97	82.094	ENSPNYG00000006037	gfm1	100	80.920	Pundamilia_nyererei
ENSCJAG00000000363	GFM1	100	79.228	ENSPNAG00000001237	gfm1	100	79.228	Pygocentrus_nattereri
ENSCJAG00000000363	GFM1	100	91.223	ENSRNOG00000012873	Gfm1	100	91.223	Rattus_norvegicus
ENSCJAG00000000363	GFM1	98	94.565	ENSRBIG00000031363	GFM1	100	94.274	Rhinopithecus_bieti
ENSCJAG00000000363	GFM1	98	94.701	ENSRROG00000031081	GFM1	100	94.407	Rhinopithecus_roxellana
ENSCJAG00000000363	GFM1	92	56.609	YLR069C	-	90	56.609	Saccharomyces_cerevisiae
ENSCJAG00000000363	GFM1	100	98.535	ENSSBOG00000023252	GFM1	100	98.535	Saimiri_boliviensis_boliviensis
ENSCJAG00000000363	GFM1	99	87.032	ENSSHAG00000017772	GFM1	99	87.032	Sarcophilus_harrisii
ENSCJAG00000000363	GFM1	96	81.250	ENSSFOG00015003117	gfm1	99	80.907	Scleropages_formosus
ENSCJAG00000000363	GFM1	97	78.926	ENSSMAG00000013221	gfm1	97	78.926	Scophthalmus_maximus
ENSCJAG00000000363	GFM1	98	79.647	ENSSDUG00000018665	gfm1	97	80.441	Seriola_dumerili
ENSCJAG00000000363	GFM1	98	79.539	ENSSLDG00000020606	gfm1	97	80.441	Seriola_lalandi_dorsalis
ENSCJAG00000000363	GFM1	97	80.357	ENSSPUG00000018686	GFM1	98	80.357	Sphenodon_punctatus
ENSCJAG00000000363	GFM1	97	80.441	ENSSPAG00000008800	gfm1	97	80.441	Stegastes_partitus
ENSCJAG00000000363	GFM1	100	91.258	ENSSSCG00000025651	GFM1	100	91.391	Sus_scrofa
ENSCJAG00000000363	GFM1	100	77.822	ENSTRUG00000009244	gfm1	100	77.822	Takifugu_rubripes
ENSCJAG00000000363	GFM1	100	79.073	ENSTNIG00000007729	gfm1	100	79.073	Tetraodon_nigroviridis
ENSCJAG00000000363	GFM1	81	94.737	ENSTBEG00000017404	GFM1	93	87.049	Tupaia_belangeri
ENSCJAG00000000363	GFM1	100	91.161	ENSTTRG00000001735	GFM1	100	91.161	Tursiops_truncatus
ENSCJAG00000000363	GFM1	98	92.276	ENSUAMG00000026381	GFM1	100	91.645	Ursus_americanus
ENSCJAG00000000363	GFM1	98	92.141	ENSUMAG00000011268	GFM1	100	91.512	Ursus_maritimus
ENSCJAG00000000363	GFM1	100	88.064	ENSVPAG00000009444	GFM1	100	88.064	Vicugna_pacos
ENSCJAG00000000363	GFM1	99	91.117	ENSVVUG00000020091	GFM1	100	92.751	Vulpes_vulpes
ENSCJAG00000000363	GFM1	100	81.408	ENSXETG00000032551	GFM1	100	81.408	Xenopus_tropicalis
ENSCJAG00000000363	GFM1	55	74.940	ENSXCOG00000012590	gfm1	94	74.940	Xiphophorus_couchianus
ENSCJAG00000000363	GFM1	97	81.405	ENSXMAG00000000261	gfm1	97	81.405	Xiphophorus_maculatus