EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000000684 (Gene tree)
Gene ID: 100406200
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 49752 bases
Position: chrNTIC01011113.1:33614112-33663863
Accession: 100406200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000001208	DUF1604	PF07713.13	8.2e-36	1	1
ENSCJAP00000001208	G-patch	PF01585.23	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000001278	GPATCH1-201	2796	XM_008987694	ENSCJAP00000001208	931 (aa)	XP_002762035	F6ZI94

Gene Model

Click here to download ENSCJAG00000000684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000000684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000000684	GPATCH1	100	95.489	ENSG00000076650	GPATCH1	100	95.489	Homo_sapiens
ENSCJAG00000000684	GPATCH1	100	88.210	ENSAMEG00000015575	GPATCH1	100	88.210	Ailuropoda_melanoleuca
ENSCJAG00000000684	GPATCH1	81	71.271	ENSAOCG00000006668	gpatch1	77	71.271	Amphiprion_ocellaris
ENSCJAG00000000684	GPATCH1	81	54.427	ENSAPEG00000000026	gpatch1	90	51.736	Amphiprion_percula
ENSCJAG00000000684	GPATCH1	81	53.141	ENSATEG00000014494	gpatch1	90	51.419	Anabas_testudineus
ENSCJAG00000000684	GPATCH1	90	60.582	ENSAPLG00000007584	GPATCH1	96	62.069	Anas_platyrhynchos
ENSCJAG00000000684	GPATCH1	100	98.174	ENSANAG00000027002	GPATCH1	100	98.174	Aotus_nancymaae
ENSCJAG00000000684	GPATCH1	81	53.827	ENSACLG00000024740	gpatch1	81	53.416	Astatotilapia_calliptera
ENSCJAG00000000684	GPATCH1	90	51.036	ENSAMXG00000020177	gpatch1	97	51.238	Astyanax_mexicanus
ENSCJAG00000000684	GPATCH1	91	87.897	ENSBTAG00000000721	GPATCH1	100	87.674	Bos_taurus
ENSCJAG00000000684	GPATCH1	100	88.865	ENSCAFG00000007457	GPATCH1	84	88.865	Canis_familiaris
ENSCJAG00000000684	GPATCH1	94	88.914	ENSCAFG00020019731	GPATCH1	91	88.954	Canis_lupus_dingo
ENSCJAG00000000684	GPATCH1	99	87.974	ENSCHIG00000019626	GPATCH1	100	87.983	Capra_hircus
ENSCJAG00000000684	GPATCH1	97	78.901	ENSCAPG00000008827	GPATCH1	100	77.033	Cavia_aperea
ENSCJAG00000000684	GPATCH1	100	81.517	ENSCPOG00000024477	GPATCH1	100	79.915	Cavia_porcellus
ENSCJAG00000000684	GPATCH1	100	98.067	ENSCCAG00000024676	GPATCH1	100	98.067	Cebus_capucinus
ENSCJAG00000000684	GPATCH1	100	95.274	ENSCATG00000043637	GPATCH1	100	95.274	Cercocebus_atys
ENSCJAG00000000684	GPATCH1	96	82.215	ENSCLAG00000003395	-	92	83.313	Chinchilla_lanigera
ENSCJAG00000000684	GPATCH1	100	92.811	ENSCSAG00000004743	GPATCH1	100	92.811	Chlorocebus_sabaeus
ENSCJAG00000000684	GPATCH1	83	79.922	ENSCHOG00000012865	GPATCH1	89	79.922	Choloepus_hoffmanni
ENSCJAG00000000684	GPATCH1	78	68.989	ENSCPBG00000000666	GPATCH1	97	67.141	Chrysemys_picta_bellii
ENSCJAG00000000684	GPATCH1	92	32.519	ENSCING00000012518	-	95	33.718	Ciona_intestinalis
ENSCJAG00000000684	GPATCH1	93	93.827	ENSCANG00000012540	GPATCH1	100	93.827	Colobus_angolensis_palliatus
ENSCJAG00000000684	GPATCH1	97	80.769	ENSCGRG00001016736	Gpatch1	100	81.758	Cricetulus_griseus_chok1gshd
ENSCJAG00000000684	GPATCH1	93	68.581	ENSCGRG00000005069	Gpatch1	90	67.769	Cricetulus_griseus_crigri
ENSCJAG00000000684	GPATCH1	78	51.327	ENSCSEG00000019456	-	84	63.303	Cynoglossus_semilaevis
ENSCJAG00000000684	GPATCH1	90	50.605	ENSDARG00000033418	gpatch1	92	50.996	Danio_rerio
ENSCJAG00000000684	GPATCH1	91	86.369	ENSDNOG00000005291	GPATCH1	95	86.369	Dasypus_novemcinctus
ENSCJAG00000000684	GPATCH1	94	80.686	ENSDORG00000012546	Gpatch1	95	80.611	Dipodomys_ordii
ENSCJAG00000000684	GPATCH1	82	31.624	FBgn0036386	CG8833	67	33.862	Drosophila_melanogaster
ENSCJAG00000000684	GPATCH1	99	76.165	ENSETEG00000003626	GPATCH1	92	76.851	Echinops_telfairi
ENSCJAG00000000684	GPATCH1	94	37.336	ENSEBUG00000011286	gpatch1	91	38.699	Eptatretus_burgeri
ENSCJAG00000000684	GPATCH1	91	87.234	ENSEASG00005021162	GPATCH1	93	87.856	Equus_asinus_asinus
ENSCJAG00000000684	GPATCH1	94	87.414	ENSECAG00000022743	GPATCH1	88	87.529	Equus_caballus
ENSCJAG00000000684	GPATCH1	78	78.431	ENSEEUG00000012925	GPATCH1	78	78.431	Erinaceus_europaeus
ENSCJAG00000000684	GPATCH1	99	49.898	ENSELUG00000018195	gpatch1	90	50.847	Esox_lucius
ENSCJAG00000000684	GPATCH1	100	87.460	ENSFCAG00000014917	GPATCH1	100	87.460	Felis_catus
ENSCJAG00000000684	GPATCH1	99	62.264	ENSFALG00000007821	GPATCH1	89	62.471	Ficedula_albicollis
ENSCJAG00000000684	GPATCH1	96	82.202	ENSFDAG00000003871	GPATCH1	100	79.422	Fukomys_damarensis
ENSCJAG00000000684	GPATCH1	83	51.628	ENSGMOG00000003830	gpatch1	98	51.628	Gadus_morhua
ENSCJAG00000000684	GPATCH1	93	62.912	ENSGALG00000004839	GPATCH1	93	63.002	Gallus_gallus
ENSCJAG00000000684	GPATCH1	91	49.307	ENSGACG00000017544	gpatch1	94	49.307	Gasterosteus_aculeatus
ENSCJAG00000000684	GPATCH1	100	65.048	ENSGAGG00000010067	GPATCH1	91	65.304	Gopherus_agassizii
ENSCJAG00000000684	GPATCH1	98	95.301	ENSGGOG00000010862	GPATCH1	100	96.026	Gorilla_gorilla
ENSCJAG00000000684	GPATCH1	81	54.033	ENSHBUG00000023462	gpatch1	90	51.311	Haplochromis_burtoni
ENSCJAG00000000684	GPATCH1	100	82.888	ENSHGLG00000009334	GPATCH1	100	82.888	Heterocephalus_glaber_female
ENSCJAG00000000684	GPATCH1	100	82.995	ENSHGLG00100018074	GPATCH1	100	82.995	Heterocephalus_glaber_male
ENSCJAG00000000684	GPATCH1	93	50.818	ENSIPUG00000014977	gpatch1	90	52.542	Ictalurus_punctatus
ENSCJAG00000000684	GPATCH1	100	86.831	ENSSTOG00000003720	GPATCH1	100	86.831	Ictidomys_tridecemlineatus
ENSCJAG00000000684	GPATCH1	91	84.118	ENSJJAG00000023765	Gpatch1	100	83.673	Jaculus_jaculus
ENSCJAG00000000684	GPATCH1	90	51.860	ENSKMAG00000017950	gpatch1	89	51.669	Kryptolebias_marmoratus
ENSCJAG00000000684	GPATCH1	94	49.519	ENSLBEG00000026527	gpatch1	88	51.126	Labrus_bergylta
ENSCJAG00000000684	GPATCH1	88	58.434	ENSLACG00000008130	GPATCH1	90	58.513	Latimeria_chalumnae
ENSCJAG00000000684	GPATCH1	82	58.031	ENSLOCG00000001800	gpatch1	90	55.326	Lepisosteus_oculatus
ENSCJAG00000000684	GPATCH1	99	87.283	ENSLAFG00000013589	GPATCH1	100	87.353	Loxodonta_africana
ENSCJAG00000000684	GPATCH1	91	95.035	ENSMFAG00000034418	GPATCH1	96	95.035	Macaca_fascicularis
ENSCJAG00000000684	GPATCH1	100	95.172	ENSMMUG00000011790	GPATCH1	100	95.172	Macaca_mulatta
ENSCJAG00000000684	GPATCH1	100	94.737	ENSMNEG00000045084	GPATCH1	100	94.737	Macaca_nemestrina
ENSCJAG00000000684	GPATCH1	100	84.211	ENSMLEG00000043840	GPATCH1	100	84.103	Mandrillus_leucophaeus
ENSCJAG00000000684	GPATCH1	81	53.827	ENSMZEG00005001926	gpatch1	82	53.416	Maylandia_zebra
ENSCJAG00000000684	GPATCH1	90	63.872	ENSMGAG00000005775	GPATCH1	89	63.441	Meleagris_gallopavo
ENSCJAG00000000684	GPATCH1	90	79.034	ENSMICG00000004829	GPATCH1	93	79.741	Microcebus_murinus
ENSCJAG00000000684	GPATCH1	99	81.525	ENSMOCG00000000174	Gpatch1	92	82.827	Microtus_ochrogaster
ENSCJAG00000000684	GPATCH1	92	47.870	ENSMMOG00000002140	gpatch1	97	47.667	Mola_mola
ENSCJAG00000000684	GPATCH1	100	69.524	ENSMODG00000012226	GPATCH1	100	69.524	Monodelphis_domestica
ENSCJAG00000000684	GPATCH1	99	49.379	ENSMALG00000014386	gpatch1	90	50.458	Monopterus_albus
ENSCJAG00000000684	GPATCH1	100	83.923	ENSMUSG00000063808	Gpatch1	100	96.939	Mus_musculus
ENSCJAG00000000684	GPATCH1	100	83.209	MGP_PahariEiJ_G0012816	Gpatch1	100	97.959	Mus_pahari
ENSCJAG00000000684	GPATCH1	100	83.512	MGP_SPRETEiJ_G0030681	Gpatch1	100	97.959	Mus_spretus
ENSCJAG00000000684	GPATCH1	100	87.353	ENSMPUG00000007658	GPATCH1	100	85.638	Mustela_putorius_furo
ENSCJAG00000000684	GPATCH1	100	86.803	ENSMLUG00000012161	GPATCH1	100	86.803	Myotis_lucifugus
ENSCJAG00000000684	GPATCH1	100	84.335	ENSNGAG00000012455	Gpatch1	100	84.335	Nannospalax_galili
ENSCJAG00000000684	GPATCH1	100	95.166	ENSNLEG00000007659	GPATCH1	100	95.166	Nomascus_leucogenys
ENSCJAG00000000684	GPATCH1	78	67.680	ENSMEUG00000015174	GPATCH1	77	67.680	Notamacropus_eugenii
ENSCJAG00000000684	GPATCH1	99	81.818	ENSODEG00000007103	GPATCH1	99	80.535	Octodon_degus
ENSCJAG00000000684	GPATCH1	82	54.768	ENSONIG00000003302	gpatch1	92	52.656	Oreochromis_niloticus
ENSCJAG00000000684	GPATCH1	99	70.267	ENSOANG00000012732	GPATCH1	99	69.635	Ornithorhynchus_anatinus
ENSCJAG00000000684	GPATCH1	100	87.353	ENSOCUG00000015905	GPATCH1	100	87.353	Oryctolagus_cuniculus
ENSCJAG00000000684	GPATCH1	90	50.533	ENSORLG00000018706	gpatch1	88	50.646	Oryzias_latipes
ENSCJAG00000000684	GPATCH1	90	49.594	ENSOMEG00000022688	gpatch1	90	51.636	Oryzias_melastigma
ENSCJAG00000000684	GPATCH1	85	88.258	ENSOGAG00000004016	GPATCH1	100	88.258	Otolemur_garnettii
ENSCJAG00000000684	GPATCH1	90	87.544	ENSOARG00000004365	GPATCH1	99	87.243	Ovis_aries
ENSCJAG00000000684	GPATCH1	100	95.596	ENSPPAG00000020990	GPATCH1	100	95.596	Pan_paniscus
ENSCJAG00000000684	GPATCH1	100	87.889	ENSPPRG00000017245	GPATCH1	100	87.889	Panthera_pardus
ENSCJAG00000000684	GPATCH1	100	88.532	ENSPTIG00000019649	GPATCH1	100	88.532	Panthera_tigris_altaica
ENSCJAG00000000684	GPATCH1	100	95.381	ENSPTRG00000010803	GPATCH1	100	95.381	Pan_troglodytes
ENSCJAG00000000684	GPATCH1	91	95.289	ENSPANG00000012374	GPATCH1	95	95.289	Papio_anubis
ENSCJAG00000000684	GPATCH1	81	55.995	ENSPKIG00000020745	gpatch1	82	55.596	Paramormyrops_kingsleyae
ENSCJAG00000000684	GPATCH1	100	61.123	ENSPSIG00000013433	GPATCH1	100	62.500	Pelodiscus_sinensis
ENSCJAG00000000684	GPATCH1	100	83.743	ENSPEMG00000000636	Gpatch1	100	83.743	Peromyscus_maniculatus_bairdii
ENSCJAG00000000684	GPATCH1	91	73.974	ENSPCIG00000021003	GPATCH1	96	74.061	Phascolarctos_cinereus
ENSCJAG00000000684	GPATCH1	71	49.627	ENSPREG00000008264	gpatch1	97	45.604	Poecilia_reticulata
ENSCJAG00000000684	GPATCH1	100	92.374	ENSPPYG00000009824	GPATCH1	100	92.374	Pongo_abelii
ENSCJAG00000000684	GPATCH1	83	78.960	ENSPCAG00000005931	GPATCH1	93	80.517	Procavia_capensis
ENSCJAG00000000684	GPATCH1	93	81.724	ENSPCOG00000009674	GPATCH1	97	83.019	Propithecus_coquereli
ENSCJAG00000000684	GPATCH1	83	87.500	ENSPVAG00000017767	GPATCH1	92	86.992	Pteropus_vampyrus
ENSCJAG00000000684	GPATCH1	81	54.370	ENSPNYG00000018189	gpatch1	89	54.499	Pundamilia_nyererei
ENSCJAG00000000684	GPATCH1	90	52.360	ENSPNAG00000013187	gpatch1	90	52.697	Pygocentrus_nattereri
ENSCJAG00000000684	GPATCH1	100	80.342	ENSRNOG00000011584	Gpatch1	100	80.171	Rattus_norvegicus
ENSCJAG00000000684	GPATCH1	100	87.124	ENSRBIG00000034723	GPATCH1	100	86.481	Rhinopithecus_bieti
ENSCJAG00000000684	GPATCH1	100	95.059	ENSRROG00000024428	GPATCH1	100	95.059	Rhinopithecus_roxellana
ENSCJAG00000000684	GPATCH1	100	97.852	ENSSBOG00000034650	GPATCH1	100	97.852	Saimiri_boliviensis_boliviensis
ENSCJAG00000000684	GPATCH1	99	72.901	ENSSHAG00000016016	GPATCH1	99	69.239	Sarcophilus_harrisii
ENSCJAG00000000684	GPATCH1	81	54.511	ENSSFOG00015011535	gpatch1	89	52.468	Scleropages_formosus
ENSCJAG00000000684	GPATCH1	99	45.384	ENSSMAG00000002883	gpatch1	93	47.294	Scophthalmus_maximus
ENSCJAG00000000684	GPATCH1	81	52.428	ENSSDUG00000007444	gpatch1	90	49.168	Seriola_dumerili
ENSCJAG00000000684	GPATCH1	81	52.764	ENSSLDG00000002856	gpatch1	94	51.130	Seriola_lalandi_dorsalis
ENSCJAG00000000684	GPATCH1	72	85.185	ENSSARG00000004108	GPATCH1	72	85.185	Sorex_araneus
ENSCJAG00000000684	GPATCH1	91	86.941	ENSSSCG00000002865	GPATCH1	94	86.941	Sus_scrofa
ENSCJAG00000000684	GPATCH1	99	63.538	ENSTGUG00000009401	GPATCH1	91	63.389	Taeniopygia_guttata
ENSCJAG00000000684	GPATCH1	81	51.881	ENSTRUG00000025081	gpatch1	90	49.536	Takifugu_rubripes
ENSCJAG00000000684	GPATCH1	81	51.881	ENSTRUG00000005785	-	90	49.536	Takifugu_rubripes
ENSCJAG00000000684	GPATCH1	81	53.161	ENSTNIG00000002554	gpatch1	99	53.367	Tetraodon_nigroviridis
ENSCJAG00000000684	GPATCH1	64	76.087	ENSTBEG00000007750	-	84	76.087	Tupaia_belangeri
ENSCJAG00000000684	GPATCH1	91	79.601	ENSTTRG00000012221	GPATCH1	100	80.128	Tursiops_truncatus
ENSCJAG00000000684	GPATCH1	90	88.480	ENSUMAG00000014645	GPATCH1	100	86.889	Ursus_maritimus
ENSCJAG00000000684	GPATCH1	79	96.571	ENSVPAG00000010313	GPATCH1	86	96.739	Vicugna_pacos
ENSCJAG00000000684	GPATCH1	94	88.800	ENSVVUG00000016572	GPATCH1	91	88.837	Vulpes_vulpes
ENSCJAG00000000684	GPATCH1	99	50.370	ENSXETG00000018276	gpatch1	100	51.165	Xenopus_tropicalis