EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000000727 (Gene tree)
Gene ID: 100397453
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 219727 bases
Position: chrNTIC01005557.1:62693245-62912971
Accession: 100397453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000001253	S1	PF00575.23	9.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000001328	SRBD1-201	2985	-	ENSCJAP00000001253	994 (aa)	XP_002757845	F6Z039

Gene Model

Click here to download ENSCJAG00000000727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000000727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000000727	SRBD1	100	93.166	ENSG00000068784	SRBD1	100	93.166	Homo_sapiens
ENSCJAG00000000727	SRBD1	100	51.277	ENSAPOG00000005103	si:ch211-117n7.8	93	53.597	Acanthochromis_polyacanthus
ENSCJAG00000000727	SRBD1	100	90.452	ENSAMEG00000005993	SRBD1	100	90.452	Ailuropoda_melanoleuca
ENSCJAG00000000727	SRBD1	83	57.432	ENSACIG00000009875	si:ch211-117n7.8	97	52.454	Amphilophus_citrinellus
ENSCJAG00000000727	SRBD1	99	50.644	ENSAOCG00000024718	si:ch211-117n7.8	97	52.041	Amphiprion_ocellaris
ENSCJAG00000000727	SRBD1	97	52.696	ENSAPEG00000002645	si:ch211-117n7.8	99	52.755	Amphiprion_percula
ENSCJAG00000000727	SRBD1	98	51.700	ENSATEG00000010844	si:ch211-117n7.8	97	52.187	Anabas_testudineus
ENSCJAG00000000727	SRBD1	100	70.198	ENSAPLG00000006313	SRBD1	100	70.198	Anas_platyrhynchos
ENSCJAG00000000727	SRBD1	100	97.485	ENSANAG00000025573	SRBD1	100	97.485	Aotus_nancymaae
ENSCJAG00000000727	SRBD1	99	50.194	ENSACLG00000024219	si:ch211-117n7.8	94	52.303	Astatotilapia_calliptera
ENSCJAG00000000727	SRBD1	86	59.285	ENSAMXG00000004294	SRBD1	93	56.062	Astyanax_mexicanus
ENSCJAG00000000727	SRBD1	100	86.546	ENSBTAG00000007508	SRBD1	97	87.349	Bos_taurus
ENSCJAG00000000727	SRBD1	100	89.268	ENSCAFG00000002554	SRBD1	100	89.268	Canis_familiaris
ENSCJAG00000000727	SRBD1	100	86.446	ENSCAFG00020026284	SRBD1	99	89.663	Canis_lupus_dingo
ENSCJAG00000000727	SRBD1	100	86.847	ENSCHIG00000016535	SRBD1	98	87.651	Capra_hircus
ENSCJAG00000000727	SRBD1	100	90.281	ENSTSYG00000012797	SRBD1	100	90.281	Carlito_syrichta
ENSCJAG00000000727	SRBD1	100	86.647	ENSCPOG00000004773	SRBD1	100	86.647	Cavia_porcellus
ENSCJAG00000000727	SRBD1	100	97.183	ENSCCAG00000025589	SRBD1	100	97.183	Cebus_capucinus
ENSCJAG00000000727	SRBD1	100	94.366	ENSCATG00000039530	SRBD1	100	94.366	Cercocebus_atys
ENSCJAG00000000727	SRBD1	100	87.575	ENSCLAG00000008623	SRBD1	100	87.575	Chinchilla_lanigera
ENSCJAG00000000727	SRBD1	100	94.266	ENSCSAG00000013350	SRBD1	100	94.266	Chlorocebus_sabaeus
ENSCJAG00000000727	SRBD1	93	76.489	ENSCHOG00000003805	SRBD1	93	76.489	Choloepus_hoffmanni
ENSCJAG00000000727	SRBD1	100	72.610	ENSCPBG00000005677	SRBD1	100	72.128	Chrysemys_picta_bellii
ENSCJAG00000000727	SRBD1	79	42.694	ENSCING00000005950	-	99	42.694	Ciona_intestinalis
ENSCJAG00000000727	SRBD1	79	43.073	ENSCSAVG00000000861	-	99	43.073	Ciona_savignyi
ENSCJAG00000000727	SRBD1	99	93.750	ENSCANG00000016307	SRBD1	99	93.750	Colobus_angolensis_palliatus
ENSCJAG00000000727	SRBD1	100	83.567	ENSCGRG00001000513	Srbd1	100	83.567	Cricetulus_griseus_chok1gshd
ENSCJAG00000000727	SRBD1	100	83.567	ENSCGRG00000002283	Srbd1	100	83.567	Cricetulus_griseus_crigri
ENSCJAG00000000727	SRBD1	100	50.294	ENSCSEG00000000856	si:ch211-117n7.8	97	51.217	Cynoglossus_semilaevis
ENSCJAG00000000727	SRBD1	84	57.075	ENSCVAG00000020212	si:ch211-117n7.8	89	57.075	Cyprinodon_variegatus
ENSCJAG00000000727	SRBD1	100	88.789	ENSDNOG00000018686	SRBD1	100	88.789	Dasypus_novemcinctus
ENSCJAG00000000727	SRBD1	100	85.427	ENSDORG00000010468	Srbd1	100	85.427	Dipodomys_ordii
ENSCJAG00000000727	SRBD1	94	34.413	FBgn0051156	CG31156	98	34.615	Drosophila_melanogaster
ENSCJAG00000000727	SRBD1	89	81.964	ENSETEG00000000739	SRBD1	91	81.964	Echinops_telfairi
ENSCJAG00000000727	SRBD1	73	48.844	ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	Eptatretus_burgeri
ENSCJAG00000000727	SRBD1	100	87.450	ENSEASG00005003132	SRBD1	97	91.083	Equus_asinus_asinus
ENSCJAG00000000727	SRBD1	100	90.462	ENSECAG00000013865	SRBD1	98	90.462	Equus_caballus
ENSCJAG00000000727	SRBD1	85	59.766	ENSELUG00000012592	si:ch211-117n7.8	82	60.047	Esox_lucius
ENSCJAG00000000727	SRBD1	100	90.161	ENSFCAG00000005101	SRBD1	100	90.161	Felis_catus
ENSCJAG00000000727	SRBD1	100	68.209	ENSFALG00000012966	SRBD1	100	68.109	Ficedula_albicollis
ENSCJAG00000000727	SRBD1	99	85.163	ENSFDAG00000016670	SRBD1	98	86.175	Fukomys_damarensis
ENSCJAG00000000727	SRBD1	95	53.099	ENSFHEG00000019480	si:ch211-117n7.8	93	53.099	Fundulus_heteroclitus
ENSCJAG00000000727	SRBD1	50	52.252	ENSGMOG00000018010	-	100	52.252	Gadus_morhua
ENSCJAG00000000727	SRBD1	100	69.600	ENSGALG00000009990	SRBD1	100	69.439	Gallus_gallus
ENSCJAG00000000727	SRBD1	84	56.604	ENSGAFG00000019664	si:ch211-117n7.8	97	51.113	Gambusia_affinis
ENSCJAG00000000727	SRBD1	62	60.640	ENSGACG00000010794	si:ch211-117n7.8	100	60.960	Gasterosteus_aculeatus
ENSCJAG00000000727	SRBD1	84	80.505	ENSGAGG00000006166	SRBD1	99	80.505	Gopherus_agassizii
ENSCJAG00000000727	SRBD1	97	93.395	ENSGGOG00000005910	SRBD1	99	93.347	Gorilla_gorilla
ENSCJAG00000000727	SRBD1	90	47.486	ENSHBUG00000013207	si:ch211-117n7.8	97	46.218	Haplochromis_burtoni
ENSCJAG00000000727	SRBD1	99	87.311	ENSHGLG00000018153	-	99	87.311	Heterocephalus_glaber_female
ENSCJAG00000000727	SRBD1	99	87.110	ENSHGLG00100015183	-	99	87.110	Heterocephalus_glaber_male
ENSCJAG00000000727	SRBD1	85	60.563	ENSIPUG00000009661	srbd1	97	55.771	Ictalurus_punctatus
ENSCJAG00000000727	SRBD1	100	89.548	ENSSTOG00000005898	SRBD1	100	89.548	Ictidomys_tridecemlineatus
ENSCJAG00000000727	SRBD1	100	79.940	ENSJJAG00000022244	Srbd1	100	79.940	Jaculus_jaculus
ENSCJAG00000000727	SRBD1	99	50.982	ENSKMAG00000003473	si:ch211-117n7.8	94	51.955	Kryptolebias_marmoratus
ENSCJAG00000000727	SRBD1	95	53.027	ENSLBEG00000027518	si:ch211-117n7.8	92	53.027	Labrus_bergylta
ENSCJAG00000000727	SRBD1	85	70.095	ENSLACG00000009790	SRBD1	100	70.095	Latimeria_chalumnae
ENSCJAG00000000727	SRBD1	100	57.241	ENSLOCG00000016360	si:ch211-117n7.8	99	57.241	Lepisosteus_oculatus
ENSCJAG00000000727	SRBD1	100	94.467	ENSMFAG00000042026	SRBD1	100	94.467	Macaca_fascicularis
ENSCJAG00000000727	SRBD1	100	94.165	ENSMMUG00000003490	SRBD1	100	94.165	Macaca_mulatta
ENSCJAG00000000727	SRBD1	100	91.751	ENSMNEG00000034701	SRBD1	100	91.751	Macaca_nemestrina
ENSCJAG00000000727	SRBD1	100	94.467	ENSMLEG00000000745	SRBD1	100	94.467	Mandrillus_leucophaeus
ENSCJAG00000000727	SRBD1	82	56.611	ENSMAMG00000021921	si:ch211-117n7.8	84	56.353	Mastacembelus_armatus
ENSCJAG00000000727	SRBD1	99	50.194	ENSMZEG00005027369	si:ch211-117n7.8	94	52.303	Maylandia_zebra
ENSCJAG00000000727	SRBD1	80	74.436	ENSMGAG00000010273	SRBD1	100	74.436	Meleagris_gallopavo
ENSCJAG00000000727	SRBD1	79	85.486	ENSMAUG00000013916	Srbd1	99	83.057	Mesocricetus_auratus
ENSCJAG00000000727	SRBD1	100	91.466	ENSMICG00000007835	SRBD1	100	91.466	Microcebus_murinus
ENSCJAG00000000727	SRBD1	100	82.849	ENSMOCG00000018716	Srbd1	100	82.849	Microtus_ochrogaster
ENSCJAG00000000727	SRBD1	84	56.287	ENSMMOG00000007507	si:ch211-117n7.8	87	56.287	Mola_mola
ENSCJAG00000000727	SRBD1	99	50.831	ENSMALG00000001562	si:ch211-117n7.8	97	51.305	Monopterus_albus
ENSCJAG00000000727	SRBD1	100	81.307	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.387	Mus_caroli
ENSCJAG00000000727	SRBD1	100	81.307	ENSMUSG00000024135	Srbd1	100	81.307	Mus_musculus
ENSCJAG00000000727	SRBD1	100	80.302	MGP_PahariEiJ_G0020924	Srbd1	100	80.302	Mus_pahari
ENSCJAG00000000727	SRBD1	100	81.407	MGP_SPRETEiJ_G0022850	Srbd1	100	81.407	Mus_spretus
ENSCJAG00000000727	SRBD1	100	87.136	ENSMLUG00000007039	SRBD1	100	87.136	Myotis_lucifugus
ENSCJAG00000000727	SRBD1	100	82.111	ENSNGAG00000011893	Srbd1	100	81.720	Nannospalax_galili
ENSCJAG00000000727	SRBD1	84	55.938	ENSNBRG00000012873	si:ch211-117n7.8	96	51.613	Neolamprologus_brichardi
ENSCJAG00000000727	SRBD1	100	93.467	ENSNLEG00000016877	SRBD1	100	93.467	Nomascus_leucogenys
ENSCJAG00000000727	SRBD1	100	84.221	ENSODEG00000012095	SRBD1	100	84.221	Octodon_degus
ENSCJAG00000000727	SRBD1	99	50.388	ENSONIG00000000945	si:ch211-117n7.8	99	58.053	Oreochromis_niloticus
ENSCJAG00000000727	SRBD1	100	90.361	ENSOCUG00000015385	SRBD1	100	90.361	Oryctolagus_cuniculus
ENSCJAG00000000727	SRBD1	98	48.733	ENSORLG00000004427	si:ch211-117n7.8	97	49.205	Oryzias_latipes
ENSCJAG00000000727	SRBD1	99	50.000	ENSORLG00020012792	si:ch211-117n7.8	99	50.291	Oryzias_latipes_hni
ENSCJAG00000000727	SRBD1	99	50.869	ENSORLG00015018598	si:ch211-117n7.8	82	57.244	Oryzias_latipes_hsok
ENSCJAG00000000727	SRBD1	98	49.852	ENSOMEG00000012229	si:ch211-117n7.8	95	50.859	Oryzias_melastigma
ENSCJAG00000000727	SRBD1	100	83.534	ENSOGAG00000001076	SRBD1	100	83.534	Otolemur_garnettii
ENSCJAG00000000727	SRBD1	100	82.638	ENSOARG00000005958	SRBD1	100	83.414	Ovis_aries
ENSCJAG00000000727	SRBD1	100	93.367	ENSPPAG00000038442	SRBD1	100	93.367	Pan_paniscus
ENSCJAG00000000727	SRBD1	100	90.251	ENSPPRG00000003449	SRBD1	100	90.251	Panthera_pardus
ENSCJAG00000000727	SRBD1	100	90.352	ENSPTIG00000012495	SRBD1	100	90.352	Panthera_tigris_altaica
ENSCJAG00000000727	SRBD1	100	93.367	ENSPTRG00000011889	SRBD1	100	93.367	Pan_troglodytes
ENSCJAG00000000727	SRBD1	100	94.266	ENSPANG00000008063	SRBD1	100	94.266	Papio_anubis
ENSCJAG00000000727	SRBD1	96	54.593	ENSPKIG00000021973	si:ch211-117n7.8	97	54.413	Paramormyrops_kingsleyae
ENSCJAG00000000727	SRBD1	100	71.357	ENSPSIG00000008992	SRBD1	100	72.060	Pelodiscus_sinensis
ENSCJAG00000000727	SRBD1	87	53.563	ENSPMGG00000013348	si:ch211-117n7.8	96	52.116	Periophthalmus_magnuspinnatus
ENSCJAG00000000727	SRBD1	100	82.041	ENSPEMG00000020684	Srbd1	100	82.041	Peromyscus_maniculatus_bairdii
ENSCJAG00000000727	SRBD1	98	50.797	ENSPFOG00000010650	si:ch211-117n7.8	83	57.075	Poecilia_formosa
ENSCJAG00000000727	SRBD1	98	50.945	ENSPLAG00000002141	si:ch211-117n7.8	97	51.365	Poecilia_latipinna
ENSCJAG00000000727	SRBD1	98	50.896	ENSPMEG00000018537	si:ch211-117n7.8	83	57.193	Poecilia_mexicana
ENSCJAG00000000727	SRBD1	84	56.958	ENSPREG00000003258	si:ch211-117n7.8	85	56.958	Poecilia_reticulata
ENSCJAG00000000727	SRBD1	100	86.066	ENSPPYG00000012444	SRBD1	99	86.066	Pongo_abelii
ENSCJAG00000000727	SRBD1	82	81.167	ENSPCAG00000005629	SRBD1	85	81.167	Procavia_capensis
ENSCJAG00000000727	SRBD1	100	78.979	ENSPCOG00000017669	SRBD1	100	78.979	Propithecus_coquereli
ENSCJAG00000000727	SRBD1	100	80.603	ENSPVAG00000001782	SRBD1	100	80.603	Pteropus_vampyrus
ENSCJAG00000000727	SRBD1	91	51.482	ENSPNYG00000000508	si:ch211-117n7.8	97	50.156	Pundamilia_nyererei
ENSCJAG00000000727	SRBD1	96	56.921	ENSPNAG00000013492	SRBD1	95	56.921	Pygocentrus_nattereri
ENSCJAG00000000727	SRBD1	100	80.120	ENSRNOG00000014720	Srbd1	99	80.723	Rattus_norvegicus
ENSCJAG00000000727	SRBD1	99	93.851	ENSRBIG00000033486	SRBD1	99	93.851	Rhinopithecus_bieti
ENSCJAG00000000727	SRBD1	99	93.851	ENSRROG00000041599	SRBD1	99	93.851	Rhinopithecus_roxellana
ENSCJAG00000000727	SRBD1	100	97.082	ENSSBOG00000024982	SRBD1	100	97.082	Saimiri_boliviensis_boliviensis
ENSCJAG00000000727	SRBD1	85	58.430	ENSSFOG00015001128	si:ch211-117n7.8	92	58.430	Scleropages_formosus
ENSCJAG00000000727	SRBD1	99	50.387	ENSSMAG00000018256	si:ch211-117n7.8	94	52.464	Scophthalmus_maximus
ENSCJAG00000000727	SRBD1	86	56.502	ENSSLDG00000023189	si:ch211-117n7.8	84	56.502	Seriola_lalandi_dorsalis
ENSCJAG00000000727	SRBD1	100	76.884	ENSSARG00000009740	SRBD1	100	76.884	Sorex_araneus
ENSCJAG00000000727	SRBD1	85	76.860	ENSSPUG00000010475	SRBD1	98	74.605	Sphenodon_punctatus
ENSCJAG00000000727	SRBD1	84	54.642	ENSSPAG00000008092	-	95	51.192	Stegastes_partitus
ENSCJAG00000000727	SRBD1	100	88.755	ENSSSCG00000008445	SRBD1	98	89.157	Sus_scrofa
ENSCJAG00000000727	SRBD1	84	76.988	ENSTGUG00000003878	SRBD1	100	76.988	Taeniopygia_guttata
ENSCJAG00000000727	SRBD1	99	50.719	ENSTRUG00000007080	si:ch211-117n7.8	96	56.018	Takifugu_rubripes
ENSCJAG00000000727	SRBD1	99	49.708	ENSTNIG00000007464	si:ch211-117n7.8	99	49.219	Tetraodon_nigroviridis
ENSCJAG00000000727	SRBD1	76	97.872	ENSTBEG00000004556	SRBD1	76	97.872	Tupaia_belangeri
ENSCJAG00000000727	SRBD1	94	88.479	ENSTTRG00000011871	SRBD1	94	88.858	Tursiops_truncatus
ENSCJAG00000000727	SRBD1	100	90.060	ENSUAMG00000008126	SRBD1	97	92.029	Ursus_americanus
ENSCJAG00000000727	SRBD1	100	90.060	ENSUMAG00000012902	SRBD1	98	90.060	Ursus_maritimus
ENSCJAG00000000727	SRBD1	91	90.728	ENSVPAG00000006825	SRBD1	100	90.728	Vicugna_pacos
ENSCJAG00000000727	SRBD1	100	89.056	ENSVVUG00000005389	SRBD1	100	89.458	Vulpes_vulpes
ENSCJAG00000000727	SRBD1	100	52.834	ENSXETG00000002760	srbd1	100	53.014	Xenopus_tropicalis
ENSCJAG00000000727	SRBD1	98	50.696	ENSXMAG00000016861	si:ch211-117n7.8	97	51.111	Xiphophorus_maculatus