EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000000794 (Gene tree)
Gene ID: 100402174
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 111854 bases
Position: chrNTIC01005557.1:64335245-64447098
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	1	7
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	2	7
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	3	7
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	4	7
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	5	7
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	6	7
ENSCJAP00000065283	PPR	PF01535.20	4.9e-35	7	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	1	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	2	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	3	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	4	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	5	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	6	7
ENSCJAP00000001418	PPR	PF01535.20	5.1e-35	7	7
ENSCJAP00000001416	PPR	PF01535.20	9.3e-19	1	3
ENSCJAP00000001416	PPR	PF01535.20	9.3e-19	2	3
ENSCJAP00000001416	PPR	PF01535.20	9.3e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000085188	LRPPRC-201	5316	-	ENSCJAP00000065283	1398 (aa)	-	U3FDU7
ENSCJAT00000001503	LRPPRC-203	1596	-	ENSCJAP00000001416	531 (aa)	-	F6X7Q9
ENSCJAT00000001505	LRPPRC-202	4206	-	ENSCJAP00000001418	1401 (aa)	-	F6X7P6

Gene Model

Click here to download ENSCJAG00000000794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000000794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000000794	LRPPRC	89	60.000	ENSAPOG00000016610	lrpprc	95	51.901	Acanthochromis_polyacanthus
ENSCJAG00000000794	LRPPRC	98	80.789	ENSAMEG00000005852	LRPPRC	100	80.716	Ailuropoda_melanoleuca
ENSCJAG00000000794	LRPPRC	90	60.125	ENSACIG00000009604	lrpprc	95	49.596	Amphilophus_citrinellus
ENSCJAG00000000794	LRPPRC	97	57.223	ENSAOCG00000005886	lrpprc	99	50.908	Amphiprion_ocellaris
ENSCJAG00000000794	LRPPRC	97	56.874	ENSAPEG00000002937	lrpprc	98	48.837	Amphiprion_percula
ENSCJAG00000000794	LRPPRC	93	57.114	ENSATEG00000010555	lrpprc	95	58.568	Anabas_testudineus
ENSCJAG00000000794	LRPPRC	100	60.452	ENSACAG00000029278	LRPPRC	99	60.621	Anolis_carolinensis
ENSCJAG00000000794	LRPPRC	100	96.788	ENSANAG00000027440	LRPPRC	100	96.788	Aotus_nancymaae
ENSCJAG00000000794	LRPPRC	87	60.086	ENSACLG00000023712	lrpprc	96	54.564	Astatotilapia_calliptera
ENSCJAG00000000794	LRPPRC	94	56.335	ENSAMXG00000004245	-	99	55.224	Astyanax_mexicanus
ENSCJAG00000000794	LRPPRC	99	81.017	ENSCHIG00000020173	LRPPRC	99	80.946	Capra_hircus
ENSCJAG00000000794	LRPPRC	96	61.099	ENSCAPG00000013631	LRPPRC	99	61.099	Cavia_aperea
ENSCJAG00000000794	LRPPRC	87	78.117	ENSCPOG00000000204	LRPPRC	100	78.035	Cavia_porcellus
ENSCJAG00000000794	LRPPRC	100	94.421	ENSCCAG00000031900	LRPPRC	100	93.991	Cebus_capucinus
ENSCJAG00000000794	LRPPRC	100	88.324	ENSCATG00000014187	LRPPRC	100	88.324	Cercocebus_atys
ENSCJAG00000000794	LRPPRC	99	77.786	ENSCLAG00000005203	LRPPRC	99	77.714	Chinchilla_lanigera
ENSCJAG00000000794	LRPPRC	100	88.555	ENSCSAG00000013233	LRPPRC	100	88.555	Chlorocebus_sabaeus
ENSCJAG00000000794	LRPPRC	99	79.924	ENSCHOG00000003631	LRPPRC	84	78.335	Choloepus_hoffmanni
ENSCJAG00000000794	LRPPRC	100	84.364	ENSCANG00000034961	LRPPRC	100	88.362	Colobus_angolensis_palliatus
ENSCJAG00000000794	LRPPRC	99	76.471	ENSCGRG00001016261	Lrpprc	100	75.107	Cricetulus_griseus_chok1gshd
ENSCJAG00000000794	LRPPRC	99	76.471	ENSCGRG00000004072	Lrpprc	100	75.107	Cricetulus_griseus_crigri
ENSCJAG00000000794	LRPPRC	93	48.062	ENSCSEG00000003850	lrpprc	86	53.409	Cynoglossus_semilaevis
ENSCJAG00000000794	LRPPRC	99	50.669	ENSCVAG00000012967	lrpprc	99	50.669	Cyprinodon_variegatus
ENSCJAG00000000794	LRPPRC	97	54.319	ENSDARG00000043970	lrpprc	96	49.364	Danio_rerio
ENSCJAG00000000794	LRPPRC	99	79.167	ENSDNOG00000012594	-	99	78.669	Dasypus_novemcinctus
ENSCJAG00000000794	LRPPRC	99	63.636	ENSDNOG00000032336	-	100	59.269	Dasypus_novemcinctus
ENSCJAG00000000794	LRPPRC	100	79.199	ENSDORG00000012233	Lrpprc	100	79.128	Dipodomys_ordii
ENSCJAG00000000794	LRPPRC	99	79.167	ENSETEG00000006657	LRPPRC	99	76.483	Echinops_telfairi
ENSCJAG00000000794	LRPPRC	79	53.810	ENSEBUG00000015884	-	89	53.810	Eptatretus_burgeri
ENSCJAG00000000794	LRPPRC	99	62.193	ENSEEUG00000012340	LRPPRC	93	69.076	Erinaceus_europaeus
ENSCJAG00000000794	LRPPRC	97	49.448	ENSELUG00000012803	lrpprc	99	49.375	Esox_lucius
ENSCJAG00000000794	LRPPRC	99	82.092	ENSFCAG00000013468	LRPPRC	99	82.092	Felis_catus
ENSCJAG00000000794	LRPPRC	96	55.952	ENSFALG00000012738	LRPPRC	99	56.567	Ficedula_albicollis
ENSCJAG00000000794	LRPPRC	100	74.875	ENSFDAG00000015328	LRPPRC	100	74.804	Fukomys_damarensis
ENSCJAG00000000794	LRPPRC	96	50.993	ENSFHEG00000019604	lrpprc	95	50.847	Fundulus_heteroclitus
ENSCJAG00000000794	LRPPRC	87	58.120	ENSGMOG00000008337	lrpprc	96	48.815	Gadus_morhua
ENSCJAG00000000794	LRPPRC	97	55.347	ENSGAFG00000001455	lrpprc	99	51.058	Gambusia_affinis
ENSCJAG00000000794	LRPPRC	97	57.744	ENSGACG00000010679	lrpprc	99	51.073	Gasterosteus_aculeatus
ENSCJAG00000000794	LRPPRC	77	88.452	ENSGGOG00000041704	-	100	88.452	Gorilla_gorilla
ENSCJAG00000000794	LRPPRC	96	52.056	ENSHBUG00000000393	lrpprc	93	51.982	Haplochromis_burtoni
ENSCJAG00000000794	LRPPRC	100	76.852	ENSHGLG00000006123	LRPPRC	100	76.709	Heterocephalus_glaber_female
ENSCJAG00000000794	LRPPRC	60	76.996	ENSHGLG00100005960	-	100	76.758	Heterocephalus_glaber_male
ENSCJAG00000000794	LRPPRC	89	57.862	ENSHCOG00000002107	lrpprc	96	51.276	Hippocampus_comes
ENSCJAG00000000794	LRPPRC	97	52.529	ENSIPUG00000009406	lrpprc	99	51.494	Ictalurus_punctatus
ENSCJAG00000000794	LRPPRC	100	81.058	ENSSTOG00000011185	LRPPRC	100	80.915	Ictidomys_tridecemlineatus
ENSCJAG00000000794	LRPPRC	100	78.699	ENSJJAG00000020475	Lrpprc	100	78.699	Jaculus_jaculus
ENSCJAG00000000794	LRPPRC	96	48.454	ENSKMAG00000003287	lrpprc	82	47.979	Kryptolebias_marmoratus
ENSCJAG00000000794	LRPPRC	93	55.340	ENSLBEG00000023225	lrpprc	90	58.568	Labrus_bergylta
ENSCJAG00000000794	LRPPRC	100	60.933	ENSLACG00000014030	LRPPRC	99	60.568	Latimeria_chalumnae
ENSCJAG00000000794	LRPPRC	95	59.024	ENSLOCG00000016390	lrpprc	92	58.950	Lepisosteus_oculatus
ENSCJAG00000000794	LRPPRC	99	75.283	ENSLAFG00000008614	LRPPRC	99	73.571	Loxodonta_africana
ENSCJAG00000000794	LRPPRC	100	88.136	ENSMFAG00000041560	LRPPRC	100	88.136	Macaca_fascicularis
ENSCJAG00000000794	LRPPRC	99	87.048	ENSMMUG00000019841	LRPPRC	100	87.796	Macaca_mulatta
ENSCJAG00000000794	LRPPRC	100	88.512	ENSMNEG00000031613	LRPPRC	100	88.512	Macaca_nemestrina
ENSCJAG00000000794	LRPPRC	93	57.760	ENSMAMG00000021835	lrpprc	98	48.229	Mastacembelus_armatus
ENSCJAG00000000794	LRPPRC	96	52.276	ENSMZEG00005027379	lrpprc	94	52.203	Maylandia_zebra
ENSCJAG00000000794	LRPPRC	100	75.680	ENSMAUG00000012118	Lrpprc	100	75.680	Mesocricetus_auratus
ENSCJAG00000000794	LRPPRC	100	83.083	ENSMICG00000010486	LRPPRC	100	83.083	Microcebus_murinus
ENSCJAG00000000794	LRPPRC	100	78.541	ENSMOCG00000006048	Lrpprc	100	78.317	Microtus_ochrogaster
ENSCJAG00000000794	LRPPRC	98	56.425	ENSMMOG00000007830	lrpprc	99	56.425	Mola_mola
ENSCJAG00000000794	LRPPRC	96	68.347	ENSMODG00000000648	LRPPRC	99	68.273	Monodelphis_domestica
ENSCJAG00000000794	LRPPRC	97	54.221	ENSMALG00000001271	lrpprc	99	49.545	Monopterus_albus
ENSCJAG00000000794	LRPPRC	99	80.682	ENSMPUG00000011800	LRPPRC	99	82.245	Mustela_putorius_furo
ENSCJAG00000000794	LRPPRC	99	82.386	ENSMLUG00000010575	LRPPRC	99	81.375	Myotis_lucifugus
ENSCJAG00000000794	LRPPRC	100	77.373	ENSNGAG00000013069	Lrpprc	100	77.373	Nannospalax_galili
ENSCJAG00000000794	LRPPRC	90	60.000	ENSNBRG00000013202	lrpprc	99	60.000	Neolamprologus_brichardi
ENSCJAG00000000794	LRPPRC	99	88.113	ENSNLEG00000016782	LRPPRC	99	88.113	Nomascus_leucogenys
ENSCJAG00000000794	LRPPRC	93	73.666	ENSOPRG00000016774	LRPPRC	93	73.666	Ochotona_princeps
ENSCJAG00000000794	LRPPRC	99	78.566	ENSODEG00000011211	LRPPRC	99	78.495	Octodon_degus
ENSCJAG00000000794	LRPPRC	97	54.563	ENSONIG00000000917	lrpprc	100	50.779	Oreochromis_niloticus
ENSCJAG00000000794	LRPPRC	75	62.727	ENSOANG00000014670	-	100	63.885	Ornithorhynchus_anatinus
ENSCJAG00000000794	LRPPRC	99	81.375	ENSOCUG00000015046	LRPPRC	95	81.304	Oryctolagus_cuniculus
ENSCJAG00000000794	LRPPRC	97	54.409	ENSORLG00000004605	lrpprc	98	48.030	Oryzias_latipes
ENSCJAG00000000794	LRPPRC	92	51.581	ENSORLG00020012536	lrpprc	99	51.513	Oryzias_latipes_hni
ENSCJAG00000000794	LRPPRC	97	54.221	ENSORLG00015018270	lrpprc	96	59.152	Oryzias_latipes_hsok
ENSCJAG00000000794	LRPPRC	94	55.644	ENSOMEG00000011863	-	98	55.644	Oryzias_melastigma
ENSCJAG00000000794	LRPPRC	100	79.557	ENSOGAG00000012798	LRPPRC	100	79.342	Otolemur_garnettii
ENSCJAG00000000794	LRPPRC	99	81.259	ENSOARG00000006522	LRPPRC	99	81.187	Ovis_aries
ENSCJAG00000000794	LRPPRC	99	85.687	ENSPPAG00000040876	LRPPRC	99	85.687	Pan_paniscus
ENSCJAG00000000794	LRPPRC	99	81.519	ENSPPRG00000006578	LRPPRC	99	81.519	Panthera_pardus
ENSCJAG00000000794	LRPPRC	97	82.201	ENSPTIG00000000933	LRPPRC	97	82.201	Panthera_tigris_altaica
ENSCJAG00000000794	LRPPRC	99	87.170	ENSPTRG00000011880	LRPPRC	99	87.170	Pan_troglodytes
ENSCJAG00000000794	LRPPRC	100	87.947	ENSPANG00000020731	LRPPRC	100	87.947	Papio_anubis
ENSCJAG00000000794	LRPPRC	90	58.969	ENSPKIG00000022232	lrpprc	97	58.969	Paramormyrops_kingsleyae
ENSCJAG00000000794	LRPPRC	61	63.963	ENSPSIG00000006830	-	98	63.847	Pelodiscus_sinensis
ENSCJAG00000000794	LRPPRC	67	44.857	ENSPMGG00000016597	lrpprc	97	44.857	Periophthalmus_magnuspinnatus
ENSCJAG00000000794	LRPPRC	77	60.337	ENSPMGG00000013171	-	84	60.337	Periophthalmus_magnuspinnatus
ENSCJAG00000000794	LRPPRC	85	57.237	ENSPMAG00000002147	lrpprc	99	45.193	Petromyzon_marinus
ENSCJAG00000000794	LRPPRC	97	54.528	ENSPFOG00000011227	lrpprc	99	50.321	Poecilia_formosa
ENSCJAG00000000794	LRPPRC	97	54.528	ENSPLAG00000004018	lrpprc	99	50.212	Poecilia_latipinna
ENSCJAG00000000794	LRPPRC	97	54.906	ENSPMEG00000016425	lrpprc	99	50.424	Poecilia_mexicana
ENSCJAG00000000794	LRPPRC	97	54.631	ENSPREG00000003662	lrpprc	99	50.494	Poecilia_reticulata
ENSCJAG00000000794	LRPPRC	58	83.891	ENSPPYG00000029532	-	100	83.891	Pongo_abelii
ENSCJAG00000000794	LRPPRC	99	78.409	ENSPCAG00000001430	LRPPRC	84	74.957	Procavia_capensis
ENSCJAG00000000794	LRPPRC	99	78.955	ENSPVAG00000002007	LRPPRC	99	78.883	Pteropus_vampyrus
ENSCJAG00000000794	LRPPRC	97	55.238	ENSPNYG00000000756	lrpprc	99	48.656	Pundamilia_nyererei
ENSCJAG00000000794	LRPPRC	98	56.538	ENSPNAG00000002895	lrpprc	97	53.569	Pygocentrus_nattereri
ENSCJAG00000000794	LRPPRC	100	76.395	ENSRNOG00000005877	Lrpprc	100	76.395	Rattus_norvegicus
ENSCJAG00000000794	LRPPRC	99	88.805	ENSRBIG00000031552	LRPPRC	100	86.690	Rhinopithecus_bieti
ENSCJAG00000000794	LRPPRC	100	88.889	ENSRROG00000042793	-	100	88.889	Rhinopithecus_roxellana
ENSCJAG00000000794	LRPPRC	100	93.032	ENSSBOG00000011807	LRPPRC	100	93.032	Saimiri_boliviensis_boliviensis
ENSCJAG00000000794	LRPPRC	96	65.655	ENSSHAG00000018725	LRPPRC	99	65.433	Sarcophilus_harrisii
ENSCJAG00000000794	LRPPRC	98	54.696	ENSSFOG00015001042	lrpprc	99	50.657	Scleropages_formosus
ENSCJAG00000000794	LRPPRC	93	53.293	ENSSMAG00000016811	-	98	53.175	Scophthalmus_maximus
ENSCJAG00000000794	LRPPRC	95	56.870	ENSSDUG00000019062	lrpprc	99	51.058	Seriola_dumerili
ENSCJAG00000000794	LRPPRC	99	43.901	ENSSLDG00000023028	lrpprc	99	44.043	Seriola_lalandi_dorsalis
ENSCJAG00000000794	LRPPRC	87	68.940	ENSSARG00000000426	LRPPRC	99	68.940	Sorex_araneus
ENSCJAG00000000794	LRPPRC	97	54.135	ENSSPAG00000000162	lrpprc	99	47.850	Stegastes_partitus
ENSCJAG00000000794	LRPPRC	99	81.629	ENSSSCG00000008452	LRPPRC	99	81.286	Sus_scrofa
ENSCJAG00000000794	LRPPRC	94	56.591	ENSTGUG00000003759	LRPPRC	100	56.236	Taeniopygia_guttata
ENSCJAG00000000794	LRPPRC	96	53.522	ENSTRUG00000008409	lrpprc	91	53.360	Takifugu_rubripes
ENSCJAG00000000794	LRPPRC	97	54.802	ENSTNIG00000007470	lrpprc	99	50.812	Tetraodon_nigroviridis
ENSCJAG00000000794	LRPPRC	99	79.599	ENSTTRG00000006403	LRPPRC	99	79.528	Tursiops_truncatus
ENSCJAG00000000794	LRPPRC	96	75.985	ENSVPAG00000008993	LRPPRC	99	75.985	Vicugna_pacos
ENSCJAG00000000794	LRPPRC	99	59.887	ENSXETG00000009296	lrpprc	99	59.645	Xenopus_tropicalis
ENSCJAG00000000794	LRPPRC	97	52.363	ENSXCOG00000013343	lrpprc	95	53.479	Xiphophorus_couchianus
ENSCJAG00000000794	LRPPRC	97	54.494	ENSXMAG00000018108	lrpprc	99	50.282	Xiphophorus_maculatus