EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000001130 (Gene tree)
Gene ID: 100409118
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 4790 bases
Position: chrNTIC01011113.1:24288112-24292901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000067133	S4	PF01479.25	2.4e-11	1	1
ENSCJAP00000001945	S4	PF01479.25	2.9e-05	1	1
ENSCJAP00000060933	Ribosomal_S4	PF00163.19	3.9e-06	1	1
ENSCJAP00000064520	Ribosomal_S4	PF00163.19	5.1e-06	1	1
ENSCJAP00000001945	Ribosomal_S4	PF00163.19	6.7e-06	1	1
ENSCJAP00000067133	Ribosomal_S4	PF00163.19	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000002060	-	429	-	ENSCJAP00000001945	142 (aa)	-	F6XQ11
ENSCJAT00000078855	-	276	-	ENSCJAP00000064520	91 (aa)	-	A0A2R8MSX9
ENSCJAT00000085490	-	240	-	ENSCJAP00000060933	79 (aa)	-	A0A2R8MK33
ENSCJAT00000077925	-	1145	-	ENSCJAP00000067133	173 (aa)	-	A0A2R8MZ59

Gene Model

Click here to download ENSCJAG00000001130's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000001130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000001130	-	95	96.296	ENSCJAG00000017658	-	86	95.270
ENSCJAG00000001130	-	77	30.631	ENSCJAG00000044585	IMP3	66	32.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000001130	-	100	100.000	ENSG00000170889	RPS9	100	100.000	Homo_sapiens
ENSCJAG00000001130	-	95	98.519	ENSAPOG00000016312	rps9	84	98.148	Acanthochromis_polyacanthus
ENSCJAG00000001130	-	97	99.275	ENSAMEG00000004630	RPS9	99	99.275	Ailuropoda_melanoleuca
ENSCJAG00000001130	-	95	98.519	ENSAOCG00000021159	rps9	84	98.148	Amphiprion_ocellaris
ENSCJAG00000001130	-	95	98.519	ENSAPEG00000008214	rps9	84	98.148	Amphiprion_percula
ENSCJAG00000001130	-	95	97.778	ENSATEG00000022661	rps9	84	97.531	Anabas_testudineus
ENSCJAG00000001130	-	95	99.259	ENSACAG00000016566	RPS9	84	99.383	Anolis_carolinensis
ENSCJAG00000001130	-	100	100.000	ENSANAG00000004180	RPS9	100	100.000	Aotus_nancymaae
ENSCJAG00000001130	-	96	84.211	ENSANAG00000020343	-	98	86.076	Aotus_nancymaae
ENSCJAG00000001130	-	95	98.519	ENSACLG00000021384	rps9	88	98.148	Astatotilapia_calliptera
ENSCJAG00000001130	-	95	96.296	ENSAMXG00000010402	rps9	100	96.324	Astyanax_mexicanus
ENSCJAG00000001130	-	99	99.291	ENSBTAG00000006487	RPS9	100	99.291	Bos_taurus
ENSCJAG00000001130	-	95	80.000	WBGene00004478	rps-9	82	83.226	Caenorhabditis_elegans
ENSCJAG00000001130	-	95	100.000	ENSCAFG00000002652	RPS9	84	100.000	Canis_familiaris
ENSCJAG00000001130	-	98	99.281	ENSCAFG00020018329	RPS9	100	99.281	Canis_lupus_dingo
ENSCJAG00000001130	-	100	94.937	ENSCHIG00000026324	-	97	94.326	Capra_hircus
ENSCJAG00000001130	-	95	100.000	ENSCHIG00000024085	RPS9	84	100.000	Capra_hircus
ENSCJAG00000001130	-	99	100.000	ENSTSYG00000012074	-	99	100.000	Carlito_syrichta
ENSCJAG00000001130	-	53	98.913	ENSCAPG00000013312	RPS9	57	98.913	Cavia_aperea
ENSCJAG00000001130	-	100	100.000	ENSCPOG00000020893	RPS9	100	100.000	Cavia_porcellus
ENSCJAG00000001130	-	100	98.734	ENSCCAG00000007081	-	100	99.281	Cebus_capucinus
ENSCJAG00000001130	-	100	100.000	ENSCATG00000029320	RPS9	100	100.000	Cercocebus_atys
ENSCJAG00000001130	-	100	100.000	ENSCLAG00000000504	RPS9	100	100.000	Chinchilla_lanigera
ENSCJAG00000001130	-	95	100.000	ENSCSAG00000018755	-	84	100.000	Chlorocebus_sabaeus
ENSCJAG00000001130	-	85	99.320	ENSCPBG00000018251	RPS9	81	99.320	Chrysemys_picta_bellii
ENSCJAG00000001130	-	94	92.593	ENSCING00000021248	-	85	92.593	Ciona_intestinalis
ENSCJAG00000001130	-	94	91.045	ENSCSAVG00000003644	-	99	91.045	Ciona_savignyi
ENSCJAG00000001130	-	100	100.000	ENSCANG00000036604	RPS9	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000001130	-	96	82.394	ENSCANG00000036954	-	80	82.394	Colobus_angolensis_palliatus
ENSCJAG00000001130	-	96	100.000	ENSCGRG00001001119	Rps9	98	100.000	Cricetulus_griseus_chok1gshd
ENSCJAG00000001130	-	95	84.444	ENSCGRG00000000157	-	82	83.951	Cricetulus_griseus_crigri
ENSCJAG00000001130	-	95	98.519	ENSCSEG00000018918	rps9	84	98.148	Cynoglossus_semilaevis
ENSCJAG00000001130	-	95	98.519	ENSCVAG00000007999	rps9	84	98.148	Cyprinodon_variegatus
ENSCJAG00000001130	-	95	95.556	ENSDARG00000011405	rps9	100	95.556	Danio_rerio
ENSCJAG00000001130	-	95	100.000	ENSDNOG00000044158	RPS9	84	100.000	Dasypus_novemcinctus
ENSCJAG00000001130	-	100	98.734	ENSDORG00000015828	Rps9	99	100.000	Dipodomys_ordii
ENSCJAG00000001130	-	90	90.323	FBgn0010408	RpS9	94	89.922	Drosophila_melanogaster
ENSCJAG00000001130	-	94	74.074	ENSETEG00000009696	RPS9	84	74.074	Echinops_telfairi
ENSCJAG00000001130	-	96	94.737	ENSEBUG00000011539	rps9	83	95.679	Eptatretus_burgeri
ENSCJAG00000001130	-	98	100.000	ENSECAG00000020316	RPS9	100	100.000	Equus_caballus
ENSCJAG00000001130	-	95	98.519	ENSELUG00000015000	rps9	84	98.148	Esox_lucius
ENSCJAG00000001130	-	100	98.734	ENSFCAG00000014048	RPS9	100	99.281	Felis_catus
ENSCJAG00000001130	-	100	98.734	ENSFDAG00000007469	RPS9	99	100.000	Fukomys_damarensis
ENSCJAG00000001130	-	95	98.519	ENSFHEG00000016569	rps9	84	98.148	Fundulus_heteroclitus
ENSCJAG00000001130	-	95	97.778	ENSGMOG00000005074	rps9	84	97.531	Gadus_morhua
ENSCJAG00000001130	-	95	98.519	ENSGAFG00000013201	rps9	84	98.148	Gambusia_affinis
ENSCJAG00000001130	-	97	97.101	ENSGACG00000010761	rps9	99	97.810	Gasterosteus_aculeatus
ENSCJAG00000001130	-	96	98.540	ENSGAGG00000002562	RPS9	99	98.540	Gopherus_agassizii
ENSCJAG00000001130	-	100	100.000	ENSGGOG00000027839	-	100	100.000	Gorilla_gorilla
ENSCJAG00000001130	-	96	96.053	ENSGGOG00000025031	-	83	96.970	Gorilla_gorilla
ENSCJAG00000001130	-	96	96.053	ENSGGOG00000042271	-	83	96.894	Gorilla_gorilla
ENSCJAG00000001130	-	95	87.407	ENSGGOG00000025810	-	83	87.654	Gorilla_gorilla
ENSCJAG00000001130	-	95	98.519	ENSHBUG00000013399	rps9	84	98.148	Haplochromis_burtoni
ENSCJAG00000001130	-	100	100.000	ENSHGLG00000017784	RPS9	100	100.000	Heterocephalus_glaber_female
ENSCJAG00000001130	-	100	100.000	ENSHGLG00100003924	RPS9	100	100.000	Heterocephalus_glaber_male
ENSCJAG00000001130	-	96	96.053	ENSHCOG00000020779	rps9	84	96.914	Hippocampus_comes
ENSCJAG00000001130	-	95	97.778	ENSIPUG00000000061	rps9	84	97.531	Ictalurus_punctatus
ENSCJAG00000001130	-	100	100.000	ENSSTOG00000020325	RPS9	100	100.000	Ictidomys_tridecemlineatus
ENSCJAG00000001130	-	97	100.000	ENSJJAG00000015795	-	100	100.000	Jaculus_jaculus
ENSCJAG00000001130	-	95	81.481	ENSJJAG00000015488	-	83	82.209	Jaculus_jaculus
ENSCJAG00000001130	-	96	97.368	ENSJJAG00000013812	-	84	95.062	Jaculus_jaculus
ENSCJAG00000001130	-	95	98.519	ENSKMAG00000005101	rps9	94	98.529	Kryptolebias_marmoratus
ENSCJAG00000001130	-	95	98.519	ENSLBEG00000017125	rps9	84	98.148	Labrus_bergylta
ENSCJAG00000001130	-	95	99.259	ENSLACG00000011099	RPS9	99	98.551	Latimeria_chalumnae
ENSCJAG00000001130	-	95	97.333	ENSLOCG00000008007	rps9	83	70.988	Lepisosteus_oculatus
ENSCJAG00000001130	-	95	100.000	ENSLAFG00000010760	RPS9	84	100.000	Loxodonta_africana
ENSCJAG00000001130	-	100	100.000	ENSMFAG00000033649	RPS9	100	100.000	Macaca_fascicularis
ENSCJAG00000001130	-	100	100.000	ENSMMUG00000022552	RPS9	100	100.000	Macaca_mulatta
ENSCJAG00000001130	-	100	100.000	ENSMNEG00000013713	RPS9	100	100.000	Macaca_nemestrina
ENSCJAG00000001130	-	100	100.000	ENSMLEG00000023735	RPS9	100	100.000	Mandrillus_leucophaeus
ENSCJAG00000001130	-	95	98.519	ENSMAMG00000019474	rps9	84	98.148	Mastacembelus_armatus
ENSCJAG00000001130	-	95	98.519	ENSMZEG00005016370	rps9	84	98.148	Maylandia_zebra
ENSCJAG00000001130	-	100	100.000	ENSMAUG00000016938	Rps9	100	100.000	Mesocricetus_auratus
ENSCJAG00000001130	-	100	98.734	ENSMICG00000014928	RPS9	100	100.000	Microcebus_murinus
ENSCJAG00000001130	-	95	100.000	ENSMOCG00000004350	-	83	100.000	Microtus_ochrogaster
ENSCJAG00000001130	-	100	100.000	ENSMOCG00000010762	Rps9	100	100.000	Microtus_ochrogaster
ENSCJAG00000001130	-	96	93.421	ENSMOCG00000006744	-	84	93.827	Microtus_ochrogaster
ENSCJAG00000001130	-	95	98.519	ENSMMOG00000016468	rps9	84	98.148	Mola_mola
ENSCJAG00000001130	-	96	94.737	ENSMODG00000003974	RPS9	82	76.543	Monodelphis_domestica
ENSCJAG00000001130	-	95	97.778	ENSMALG00000009363	rps9	84	97.531	Monopterus_albus
ENSCJAG00000001130	-	100	100.000	MGP_CAROLIEiJ_G0029100	Rps9	100	100.000	Mus_caroli
ENSCJAG00000001130	-	100	100.000	ENSMUSG00000006333	Rps9	100	100.000	Mus_musculus
ENSCJAG00000001130	-	100	97.468	MGP_PahariEiJ_G0020969	Rps9	100	99.265	Mus_pahari
ENSCJAG00000001130	-	95	100.000	MGP_SPRETEiJ_G0030153	Rps9	100	100.000	Mus_spretus
ENSCJAG00000001130	-	95	100.000	ENSMPUG00000010394	RPS9	84	100.000	Mustela_putorius_furo
ENSCJAG00000001130	-	95	94.118	ENSMPUG00000019169	-	84	92.638	Mustela_putorius_furo
ENSCJAG00000001130	-	95	99.259	ENSMLUG00000016897	-	84	99.383	Myotis_lucifugus
ENSCJAG00000001130	-	95	98.519	ENSMLUG00000002154	-	83	98.765	Myotis_lucifugus
ENSCJAG00000001130	-	100	98.734	ENSNGAG00000023394	Rps9	100	98.734	Nannospalax_galili
ENSCJAG00000001130	-	95	83.704	ENSNGAG00000017852	-	96	91.304	Nannospalax_galili
ENSCJAG00000001130	-	100	96.203	ENSNBRG00000003450	rps9	100	96.203	Neolamprologus_brichardi
ENSCJAG00000001130	-	96	94.203	ENSNLEG00000035027	-	100	92.908	Nomascus_leucogenys
ENSCJAG00000001130	-	98	96.403	ENSNLEG00000018247	-	99	96.403	Nomascus_leucogenys
ENSCJAG00000001130	-	100	100.000	ENSNLEG00000006314	RPS9	100	100.000	Nomascus_leucogenys
ENSCJAG00000001130	-	95	100.000	ENSOPRG00000001628	-	84	100.000	Ochotona_princeps
ENSCJAG00000001130	-	100	100.000	ENSODEG00000002087	-	100	100.000	Octodon_degus
ENSCJAG00000001130	-	95	94.074	ENSODEG00000019680	-	83	94.410	Octodon_degus
ENSCJAG00000001130	-	96	96.053	ENSODEG00000019010	-	84	95.062	Octodon_degus
ENSCJAG00000001130	-	100	87.342	ENSODEG00000019411	-	84	90.741	Octodon_degus
ENSCJAG00000001130	-	100	79.577	ENSODEG00000016631	-	89	83.871	Octodon_degus
ENSCJAG00000001130	-	95	98.519	ENSONIG00000012752	rps9	84	98.148	Oreochromis_niloticus
ENSCJAG00000001130	-	95	99.259	ENSOANG00000014748	-	100	99.265	Ornithorhynchus_anatinus
ENSCJAG00000001130	-	95	97.037	ENSORLG00000011258	rps9	84	96.914	Oryzias_latipes
ENSCJAG00000001130	-	95	97.037	ENSORLG00020007734	rps9	84	96.914	Oryzias_latipes_hni
ENSCJAG00000001130	-	100	94.366	ENSORLG00015013498	rps9	99	94.366	Oryzias_latipes_hsok
ENSCJAG00000001130	-	95	97.778	ENSOMEG00000010547	rps9	84	97.531	Oryzias_melastigma
ENSCJAG00000001130	-	95	100.000	ENSOGAG00000006813	RPS9	84	100.000	Otolemur_garnettii
ENSCJAG00000001130	-	100	96.479	ENSOARG00000002753	-	84	98.765	Ovis_aries
ENSCJAG00000001130	-	100	93.662	ENSOARG00000010831	-	90	96.296	Ovis_aries
ENSCJAG00000001130	-	95	84.444	ENSPPAG00000043211	-	86	83.562	Pan_paniscus
ENSCJAG00000001130	-	100	100.000	ENSPPAG00000028401	RPS9	100	100.000	Pan_paniscus
ENSCJAG00000001130	-	100	98.734	ENSPPRG00000011810	RPS9	100	99.281	Panthera_pardus
ENSCJAG00000001130	-	92	85.000	ENSPTIG00000010169	RPS9	66	100.000	Panthera_tigris_altaica
ENSCJAG00000001130	-	94	98.496	ENSPTRG00000041697	-	94	92.414	Pan_troglodytes
ENSCJAG00000001130	-	95	88.889	ENSPTRG00000045479	-	87	87.671	Pan_troglodytes
ENSCJAG00000001130	-	98	99.281	ENSPTRG00000050995	-	100	99.281	Pan_troglodytes
ENSCJAG00000001130	-	100	100.000	ENSPTRG00000011449	RPS9	100	100.000	Pan_troglodytes
ENSCJAG00000001130	-	94	79.630	ENSPANG00000011359	RPS9	100	74.820	Papio_anubis
ENSCJAG00000001130	-	96	98.684	ENSPSIG00000005938	RPS9	83	93.827	Pelodiscus_sinensis
ENSCJAG00000001130	-	95	98.519	ENSPMGG00000012078	rps9	84	98.148	Periophthalmus_magnuspinnatus
ENSCJAG00000001130	-	100	100.000	ENSPEMG00000013302	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCJAG00000001130	-	95	96.296	ENSPMAG00000000193	-	84	95.679	Petromyzon_marinus
ENSCJAG00000001130	-	95	100.000	ENSPCIG00000023372	RPS9	84	100.000	Phascolarctos_cinereus
ENSCJAG00000001130	-	95	97.794	ENSPFOG00000009299	rps9	84	97.546	Poecilia_formosa
ENSCJAG00000001130	-	95	98.519	ENSPLAG00000012829	rps9	84	98.148	Poecilia_latipinna
ENSCJAG00000001130	-	95	98.519	ENSPMEG00000017606	rps9	84	98.148	Poecilia_mexicana
ENSCJAG00000001130	-	95	98.519	ENSPREG00000007924	rps9	100	98.529	Poecilia_reticulata
ENSCJAG00000001130	-	95	100.000	ENSPPYG00000010377	RPS9	84	100.000	Pongo_abelii
ENSCJAG00000001130	-	95	100.000	ENSPCAG00000012395	RPS9	86	100.000	Procavia_capensis
ENSCJAG00000001130	-	100	98.734	ENSPCOG00000013987	RPS9	100	99.281	Propithecus_coquereli
ENSCJAG00000001130	-	92	100.000	ENSPVAG00000015571	RPS9	51	100.000	Pteropus_vampyrus
ENSCJAG00000001130	-	95	98.519	ENSPNYG00000002115	rps9	84	98.148	Pundamilia_nyererei
ENSCJAG00000001130	-	95	98.519	ENSPNAG00000011249	rps9	84	98.148	Pygocentrus_nattereri
ENSCJAG00000001130	-	95	94.074	ENSRNOG00000050067	AABR07026058.1	83	94.444	Rattus_norvegicus
ENSCJAG00000001130	-	95	100.000	ENSRNOG00000058909	Rps9l1	100	100.000	Rattus_norvegicus
ENSCJAG00000001130	-	96	94.737	ENSRNOG00000039203	AABR07040892.1	84	95.062	Rattus_norvegicus
ENSCJAG00000001130	-	95	86.667	ENSRBIG00000042902	-	82	87.654	Rhinopithecus_bieti
ENSCJAG00000001130	-	97	93.525	ENSRBIG00000040750	-	88	93.525	Rhinopithecus_bieti
ENSCJAG00000001130	-	100	100.000	ENSRBIG00000041681	RPS9	100	100.000	Rhinopithecus_bieti
ENSCJAG00000001130	-	96	93.421	ENSRROG00000043910	-	91	90.210	Rhinopithecus_roxellana
ENSCJAG00000001130	-	100	100.000	ENSRROG00000036731	RPS9	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000001130	-	93	76.398	ENSRROG00000030184	-	80	76.398	Rhinopithecus_roxellana
ENSCJAG00000001130	-	93	72.727	YPL081W	RPS9A	81	73.292	Saccharomyces_cerevisiae
ENSCJAG00000001130	-	93	73.485	YBR189W	RPS9B	82	73.913	Saccharomyces_cerevisiae
ENSCJAG00000001130	-	100	100.000	ENSSBOG00000015501	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCJAG00000001130	-	96	72.368	ENSSBOG00000024187	-	90	70.504	Saimiri_boliviensis_boliviensis
ENSCJAG00000001130	-	95	98.519	ENSSFOG00015000650	rps9	84	98.148	Scleropages_formosus
ENSCJAG00000001130	-	95	98.519	ENSSMAG00000013149	rps9	84	98.148	Scophthalmus_maximus
ENSCJAG00000001130	-	95	98.519	ENSSDUG00000008689	rps9	84	98.148	Seriola_dumerili
ENSCJAG00000001130	-	95	98.519	ENSSLDG00000022240	rps9	84	98.148	Seriola_lalandi_dorsalis
ENSCJAG00000001130	-	95	94.074	ENSSARG00000010223	-	84	95.062	Sorex_araneus
ENSCJAG00000001130	-	95	100.000	ENSSARG00000005909	RPS9	84	100.000	Sorex_araneus
ENSCJAG00000001130	-	100	97.468	ENSSPUG00000008604	RPS9	100	97.468	Sphenodon_punctatus
ENSCJAG00000001130	-	95	98.519	ENSSPAG00000016660	rps9	84	98.148	Stegastes_partitus
ENSCJAG00000001130	-	98	99.281	ENSSSCG00000029785	RPS9	100	99.281	Sus_scrofa
ENSCJAG00000001130	-	100	94.937	ENSTRUG00000015896	rps9	100	94.937	Takifugu_rubripes
ENSCJAG00000001130	-	94	86.420	ENSTBEG00000003585	RPS9	84	86.420	Tupaia_belangeri
ENSCJAG00000001130	-	83	100.000	ENSTTRG00000006572	RPS9	82	100.000	Tursiops_truncatus
ENSCJAG00000001130	-	98	99.281	ENSUMAG00000010897	RPS9	100	99.281	Ursus_maritimus
ENSCJAG00000001130	-	98	99.281	ENSVVUG00000008202	-	84	100.000	Vulpes_vulpes
ENSCJAG00000001130	-	95	98.519	ENSXETG00000009030	rps9	84	98.765	Xenopus_tropicalis
ENSCJAG00000001130	-	95	98.519	ENSXMAG00000012175	rps9	94	98.529	Xiphophorus_maculatus