EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000001573 (Gene tree)
Gene ID: 100409225
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 185976 bases
Position: chrNTIC01014446.1:34970550-35156525
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000003059	ResIII	PF04851.15	7.5e-06	1	1
ENSCJAP00000002891	BRK	PF07533.16	1e-31	1	2
ENSCJAP00000002891	BRK	PF07533.16	1e-31	2	2
ENSCJAP00000003059	BRK	PF07533.16	1.1e-30	1	2
ENSCJAP00000003059	BRK	PF07533.16	1.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000003056	CHD9-202	2892	-	ENSCJAP00000002891	963 (aa)	-	F7I4D6
ENSCJAT00000003228	CHD9-201	8809	-	ENSCJAP00000003059	2881 (aa)	-	F7G7C1

Gene Model

Click here to download ENSCJAG00000001573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000001573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000001573	CHD9	90	56.306	ENSCJAG00000009025	CHD7	87	66.731
ENSCJAG00000001573	CHD9	74	56.835	ENSCJAG00000009002	CHD8	81	68.559
ENSCJAG00000001573	CHD9	91	46.179	ENSCJAG00000017920	CHD6	99	71.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000001573	CHD9	100	99.267	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSCJAG00000001573	CHD9	93	70.107	ENSAPOG00000023034	chd9	98	68.692	Acanthochromis_polyacanthus
ENSCJAG00000001573	CHD9	100	97.436	ENSAMEG00000016232	CHD9	100	95.660	Ailuropoda_melanoleuca
ENSCJAG00000001573	CHD9	93	69.718	ENSAOCG00000005487	chd9	99	60.586	Amphiprion_ocellaris
ENSCJAG00000001573	CHD9	93	70.463	ENSAPEG00000009859	chd9	99	61.130	Amphiprion_percula
ENSCJAG00000001573	CHD9	91	71.429	ENSATEG00000002748	chd9	100	61.981	Anabas_testudineus
ENSCJAG00000001573	CHD9	98	92.308	ENSAPLG00000002826	CHD9	74	85.687	Anas_platyrhynchos
ENSCJAG00000001573	CHD9	98	88.645	ENSACAG00000016150	CHD9	98	81.489	Anolis_carolinensis
ENSCJAG00000001573	CHD9	100	99.634	ENSANAG00000015630	CHD9	100	99.634	Aotus_nancymaae
ENSCJAG00000001573	CHD9	92	69.231	ENSACLG00000016899	chd9	99	61.637	Astatotilapia_calliptera
ENSCJAG00000001573	CHD9	98	70.526	ENSAMXG00000005652	chd9	98	68.359	Astyanax_mexicanus
ENSCJAG00000001573	CHD9	100	98.535	ENSBTAG00000002287	CHD9	100	95.149	Bos_taurus
ENSCJAG00000001573	CHD9	100	98.168	ENSCAFG00000009699	CHD9	100	95.625	Canis_familiaris
ENSCJAG00000001573	CHD9	100	98.168	ENSCAFG00020002879	CHD9	100	98.168	Canis_lupus_dingo
ENSCJAG00000001573	CHD9	100	97.802	ENSTSYG00000007693	CHD9	100	97.802	Carlito_syrichta
ENSCJAG00000001573	CHD9	82	96.774	ENSCAPG00000011604	CHD9	82	79.177	Cavia_aperea
ENSCJAG00000001573	CHD9	100	97.070	ENSCPOG00000036544	CHD9	100	91.244	Cavia_porcellus
ENSCJAG00000001573	CHD9	100	99.267	ENSCCAG00000036178	CHD9	100	99.267	Cebus_capucinus
ENSCJAG00000001573	CHD9	100	99.267	ENSCATG00000036753	CHD9	100	99.267	Cercocebus_atys
ENSCJAG00000001573	CHD9	98	98.535	ENSCLAG00000007137	CHD9	99	97.572	Chinchilla_lanigera
ENSCJAG00000001573	CHD9	100	99.267	ENSCSAG00000005311	CHD9	100	97.520	Chlorocebus_sabaeus
ENSCJAG00000001573	CHD9	73	96.154	ENSCHOG00000003935	CHD9	76	96.154	Choloepus_hoffmanni
ENSCJAG00000001573	CHD9	98	87.179	ENSCPBG00000012459	CHD9	99	91.474	Chrysemys_picta_bellii
ENSCJAG00000001573	CHD9	100	99.267	ENSCANG00000030349	CHD9	100	99.267	Colobus_angolensis_palliatus
ENSCJAG00000001573	CHD9	98	96.337	ENSCGRG00001016150	Chd9	99	91.354	Cricetulus_griseus_chok1gshd
ENSCJAG00000001573	CHD9	98	96.337	ENSCGRG00000012850	Chd9	99	96.416	Cricetulus_griseus_crigri
ENSCJAG00000001573	CHD9	93	68.858	ENSCSEG00000009209	chd9	98	58.569	Cynoglossus_semilaevis
ENSCJAG00000001573	CHD9	91	69.580	ENSCVAG00000016195	chd9	99	60.769	Cyprinodon_variegatus
ENSCJAG00000001573	CHD9	97	69.014	ENSDARG00000074498	chd9	68	73.738	Danio_rerio
ENSCJAG00000001573	CHD9	100	95.238	ENSDNOG00000006045	CHD9	100	94.048	Dasypus_novemcinctus
ENSCJAG00000001573	CHD9	100	94.505	ENSDORG00000008523	-	100	94.200	Dipodomys_ordii
ENSCJAG00000001573	CHD9	92	100.000	ENSETEG00000009565	CHD9	94	96.842	Echinops_telfairi
ENSCJAG00000001573	CHD9	98	97.802	ENSEASG00005014832	CHD9	100	95.453	Equus_asinus_asinus
ENSCJAG00000001573	CHD9	100	97.802	ENSECAG00000011505	CHD9	100	94.936	Equus_caballus
ENSCJAG00000001573	CHD9	83	97.238	ENSEEUG00000014515	CHD9	86	97.238	Erinaceus_europaeus
ENSCJAG00000001573	CHD9	94	71.228	ENSELUG00000006031	chd9	90	70.924	Esox_lucius
ENSCJAG00000001573	CHD9	100	97.802	ENSFCAG00000022534	CHD9	100	97.802	Felis_catus
ENSCJAG00000001573	CHD9	98	91.209	ENSFALG00000013276	CHD9	99	87.052	Ficedula_albicollis
ENSCJAG00000001573	CHD9	100	98.168	ENSFDAG00000021037	CHD9	100	94.416	Fukomys_damarensis
ENSCJAG00000001573	CHD9	91	68.794	ENSFHEG00000006068	chd9	95	69.558	Fundulus_heteroclitus
ENSCJAG00000001573	CHD9	82	69.416	ENSGMOG00000006040	chd9	83	76.866	Gadus_morhua
ENSCJAG00000001573	CHD9	96	84.685	ENSGALG00000039178	CHD9	98	85.009	Gallus_gallus
ENSCJAG00000001573	CHD9	93	68.881	ENSGAFG00000010014	chd9	98	68.147	Gambusia_affinis
ENSCJAG00000001573	CHD9	98	84.289	ENSGAGG00000001048	-	98	87.546	Gopherus_agassizii
ENSCJAG00000001573	CHD9	100	99.634	ENSGGOG00000014816	CHD9	100	99.634	Gorilla_gorilla
ENSCJAG00000001573	CHD9	92	69.825	ENSHBUG00000023322	chd9	97	69.580	Haplochromis_burtoni
ENSCJAG00000001573	CHD9	100	98.168	ENSHGLG00000014938	CHD9	99	98.035	Heterocephalus_glaber_female
ENSCJAG00000001573	CHD9	100	92.427	ENSHGLG00100007620	-	100	93.407	Heterocephalus_glaber_male
ENSCJAG00000001573	CHD9	91	68.858	ENSHCOG00000000937	chd9	69	73.211	Hippocampus_comes
ENSCJAG00000001573	CHD9	97	72.628	ENSIPUG00000016448	chd9	97	73.723	Ictalurus_punctatus
ENSCJAG00000001573	CHD9	100	97.070	ENSSTOG00000022273	CHD9	99	98.497	Ictidomys_tridecemlineatus
ENSCJAG00000001573	CHD9	100	97.070	ENSJJAG00000015741	-	100	93.644	Jaculus_jaculus
ENSCJAG00000001573	CHD9	92	71.378	ENSKMAG00000016784	chd9	94	69.841	Kryptolebias_marmoratus
ENSCJAG00000001573	CHD9	91	68.662	ENSLBEG00000012077	chd9	98	67.861	Labrus_bergylta
ENSCJAG00000001573	CHD9	98	73.373	ENSLACG00000005557	CHD9	99	71.026	Latimeria_chalumnae
ENSCJAG00000001573	CHD9	98	75.714	ENSLOCG00000007225	chd9	68	79.892	Lepisosteus_oculatus
ENSCJAG00000001573	CHD9	100	96.337	ENSLAFG00000015374	CHD9	100	94.215	Loxodonta_africana
ENSCJAG00000001573	CHD9	100	99.267	ENSMFAG00000041354	CHD9	100	99.267	Macaca_fascicularis
ENSCJAG00000001573	CHD9	100	99.267	ENSMMUG00000016310	CHD9	100	99.267	Macaca_mulatta
ENSCJAG00000001573	CHD9	100	98.901	ENSMNEG00000031494	CHD9	100	97.588	Macaca_nemestrina
ENSCJAG00000001573	CHD9	100	99.267	ENSMLEG00000043219	CHD9	100	99.267	Mandrillus_leucophaeus
ENSCJAG00000001573	CHD9	91	69.014	ENSMAMG00000003909	chd9	99	60.539	Mastacembelus_armatus
ENSCJAG00000001573	CHD9	92	69.825	ENSMZEG00005006581	chd9	98	68.722	Maylandia_zebra
ENSCJAG00000001573	CHD9	98	92.674	ENSMGAG00000004642	CHD9	72	80.704	Meleagris_gallopavo
ENSCJAG00000001573	CHD9	95	91.205	ENSMAUG00000000526	-	98	96.400	Mesocricetus_auratus
ENSCJAG00000001573	CHD9	100	97.070	ENSMICG00000016679	CHD9	100	97.070	Microcebus_murinus
ENSCJAG00000001573	CHD9	98	92.251	ENSMOCG00000010691	-	98	95.971	Microtus_ochrogaster
ENSCJAG00000001573	CHD9	91	70.318	ENSMMOG00000016406	chd9	74	63.000	Mola_mola
ENSCJAG00000001573	CHD9	98	84.266	ENSMODG00000013142	-	99	91.945	Monodelphis_domestica
ENSCJAG00000001573	CHD9	92	64.014	ENSMALG00000013306	chd9	73	62.203	Monopterus_albus
ENSCJAG00000001573	CHD9	98	94.872	MGP_CAROLIEiJ_G0031364	Chd9	99	90.652	Mus_caroli
ENSCJAG00000001573	CHD9	98	94.505	ENSMUSG00000056608	Chd9	99	95.376	Mus_musculus
ENSCJAG00000001573	CHD9	98	94.872	MGP_PahariEiJ_G0022964	Chd9	99	88.606	Mus_pahari
ENSCJAG00000001573	CHD9	98	94.139	MGP_SPRETEiJ_G0032483	Chd9	99	90.262	Mus_spretus
ENSCJAG00000001573	CHD9	100	97.802	ENSMPUG00000003285	CHD9	100	94.693	Mustela_putorius_furo
ENSCJAG00000001573	CHD9	100	98.168	ENSMLUG00000004456	CHD9	100	93.828	Myotis_lucifugus
ENSCJAG00000001573	CHD9	100	91.805	ENSNGAG00000015820	-	100	96.703	Nannospalax_galili
ENSCJAG00000001573	CHD9	92	70.567	ENSNBRG00000009423	chd9	97	69.353	Neolamprologus_brichardi
ENSCJAG00000001573	CHD9	90	97.546	ENSNLEG00000001026	CHD9	100	97.546	Nomascus_leucogenys
ENSCJAG00000001573	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSCJAG00000001573	CHD9	87	100.000	ENSOPRG00000011168	CHD9	85	96.857	Ochotona_princeps
ENSCJAG00000001573	CHD9	98	96.715	ENSODEG00000004466	CHD9	99	94.416	Octodon_degus
ENSCJAG00000001573	CHD9	93	69.474	ENSONIG00000002816	chd9	87	62.885	Oreochromis_niloticus
ENSCJAG00000001573	CHD9	100	93.455	ENSOANG00000013401	CHD9	100	86.609	Ornithorhynchus_anatinus
ENSCJAG00000001573	CHD9	100	97.070	ENSOCUG00000001016	CHD9	99	96.318	Oryctolagus_cuniculus
ENSCJAG00000001573	CHD9	92	70.486	ENSORLG00000013810	chd9	99	59.680	Oryzias_latipes
ENSCJAG00000001573	CHD9	92	73.381	ENSORLG00020020665	chd9	75	62.914	Oryzias_latipes_hni
ENSCJAG00000001573	CHD9	92	70.486	ENSORLG00015019126	chd9	94	68.978	Oryzias_latipes_hsok
ENSCJAG00000001573	CHD9	100	97.436	ENSOGAG00000002110	CHD9	100	95.210	Otolemur_garnettii
ENSCJAG00000001573	CHD9	100	96.739	ENSOARG00000017664	CHD9	100	94.355	Ovis_aries
ENSCJAG00000001573	CHD9	100	99.634	ENSPPAG00000039388	-	100	96.888	Pan_paniscus
ENSCJAG00000001573	CHD9	100	97.436	ENSPPRG00000004801	CHD9	100	97.436	Panthera_pardus
ENSCJAG00000001573	CHD9	100	94.380	ENSPTIG00000021854	CHD9	100	94.140	Panthera_tigris_altaica
ENSCJAG00000001573	CHD9	100	99.634	ENSPTRG00000008113	CHD9	100	99.634	Pan_troglodytes
ENSCJAG00000001573	CHD9	100	99.267	ENSPANG00000019307	CHD9	100	99.267	Papio_anubis
ENSCJAG00000001573	CHD9	90	73.022	ENSPKIG00000021876	chd9	68	76.523	Paramormyrops_kingsleyae
ENSCJAG00000001573	CHD9	94	70.567	ENSPKIG00000025401	-	71	62.902	Paramormyrops_kingsleyae
ENSCJAG00000001573	CHD9	64	84.649	ENSPSIG00000008099	CHD9	99	84.595	Pelodiscus_sinensis
ENSCJAG00000001573	CHD9	96	60.677	ENSPMGG00000021802	chd9	100	72.500	Periophthalmus_magnuspinnatus
ENSCJAG00000001573	CHD9	98	90.764	ENSPEMG00000021464	-	98	97.070	Peromyscus_maniculatus_bairdii
ENSCJAG00000001573	CHD9	65	61.172	ENSPMAG00000006035	-	72	68.035	Petromyzon_marinus
ENSCJAG00000001573	CHD9	89	86.957	ENSPCIG00000017215	CHD9	97	89.613	Phascolarctos_cinereus
ENSCJAG00000001573	CHD9	93	68.531	ENSPFOG00000015839	chd9	96	66.165	Poecilia_formosa
ENSCJAG00000001573	CHD9	93	69.258	ENSPLAG00000011118	chd9	98	68.312	Poecilia_latipinna
ENSCJAG00000001573	CHD9	93	69.611	ENSPMEG00000015106	chd9	95	65.925	Poecilia_mexicana
ENSCJAG00000001573	CHD9	93	69.258	ENSPREG00000006473	chd9	98	68.107	Poecilia_reticulata
ENSCJAG00000001573	CHD9	100	99.267	ENSPPYG00000007348	CHD9	100	97.758	Pongo_abelii
ENSCJAG00000001573	CHD9	78	96.415	ENSPCAG00000007564	CHD9	86	96.415	Procavia_capensis
ENSCJAG00000001573	CHD9	100	98.168	ENSPCOG00000028433	CHD9	100	98.168	Propithecus_coquereli
ENSCJAG00000001573	CHD9	90	100.000	ENSPVAG00000015617	CHD9	98	90.899	Pteropus_vampyrus
ENSCJAG00000001573	CHD9	92	69.825	ENSPNYG00000010947	chd9	98	68.722	Pundamilia_nyererei
ENSCJAG00000001573	CHD9	92	71.273	ENSPNAG00000024141	chd9	99	68.944	Pygocentrus_nattereri
ENSCJAG00000001573	CHD9	88	92.655	ENSRNOG00000049302	Chd9	100	90.032	Rattus_norvegicus
ENSCJAG00000001573	CHD9	100	99.267	ENSRBIG00000035553	CHD9	100	99.267	Rhinopithecus_bieti
ENSCJAG00000001573	CHD9	100	99.267	ENSRROG00000033278	CHD9	100	99.267	Rhinopithecus_roxellana
ENSCJAG00000001573	CHD9	100	99.267	ENSSBOG00000030240	CHD9	100	99.267	Saimiri_boliviensis_boliviensis
ENSCJAG00000001573	CHD9	98	90.909	ENSSHAG00000002719	CHD9	100	87.891	Sarcophilus_harrisii
ENSCJAG00000001573	CHD9	93	71.326	ENSSFOG00015001327	chd9	67	75.515	Scleropages_formosus
ENSCJAG00000001573	CHD9	93	72.500	ENSSFOG00015020209	chd9	68	76.788	Scleropages_formosus
ENSCJAG00000001573	CHD9	92	68.182	ENSSMAG00000008953	chd9	99	62.467	Scophthalmus_maximus
ENSCJAG00000001573	CHD9	91	70.423	ENSSDUG00000006139	chd9	98	68.639	Seriola_dumerili
ENSCJAG00000001573	CHD9	92	71.277	ENSSLDG00000017818	chd9	98	68.621	Seriola_lalandi_dorsalis
ENSCJAG00000001573	CHD9	100	95.956	ENSSARG00000010632	CHD9	71	97.260	Sorex_araneus
ENSCJAG00000001573	CHD9	98	85.881	ENSSPUG00000017465	-	98	90.476	Sphenodon_punctatus
ENSCJAG00000001573	CHD9	93	69.718	ENSSPAG00000021649	chd9	67	74.776	Stegastes_partitus
ENSCJAG00000001573	CHD9	90	84.436	ENSTGUG00000007476	CHD9	100	84.818	Taeniopygia_guttata
ENSCJAG00000001573	CHD9	97	71.174	ENSTRUG00000009125	chd9	99	60.492	Takifugu_rubripes
ENSCJAG00000001573	CHD9	75	67.254	ENSTNIG00000003825	chd9	96	63.318	Tetraodon_nigroviridis
ENSCJAG00000001573	CHD9	64	95.946	ENSTBEG00000016052	-	78	95.946	Tupaia_belangeri
ENSCJAG00000001573	CHD9	90	93.908	ENSTTRG00000012674	CHD9	90	94.444	Tursiops_truncatus
ENSCJAG00000001573	CHD9	100	98.168	ENSUAMG00000022706	CHD9	100	98.168	Ursus_americanus
ENSCJAG00000001573	CHD9	90	92.745	ENSUMAG00000004043	CHD9	99	97.974	Ursus_maritimus
ENSCJAG00000001573	CHD9	98	96.703	ENSVPAG00000001374	CHD9	97	94.634	Vicugna_pacos
ENSCJAG00000001573	CHD9	100	98.168	ENSVVUG00000019435	CHD9	100	95.694	Vulpes_vulpes
ENSCJAG00000001573	CHD9	98	80.952	ENSXETG00000000349	chd9	96	76.862	Xenopus_tropicalis
ENSCJAG00000001573	CHD9	93	69.258	ENSXCOG00000012997	chd9	98	68.372	Xiphophorus_couchianus
ENSCJAG00000001573	CHD9	93	68.881	ENSXMAG00000016192	chd9	99	68.722	Xiphophorus_maculatus