EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000001773 (Gene tree)
Gene ID: 100399268
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 113203 bases
Position: chrNTIC01011112.1:50560608-50673810
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000050850	rRNA_proc-arch	PF13234.6	5.4e-87	1	1
ENSCJAP00000003367	rRNA_proc-arch	PF13234.6	5.6e-87	1	1
ENSCJAP00000055569	rRNA_proc-arch	PF13234.6	5.9e-87	1	1
ENSCJAP00000003367	DEAD	PF00270.29	6.1e-17	1	1
ENSCJAP00000050850	DEAD	PF00270.29	6.2e-17	1	1
ENSCJAP00000055569	DEAD	PF00270.29	6.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000061979	MTREX-201	3165	-	ENSCJAP00000050850	1054 (aa)	-	F7FN28
ENSCJAT00000078838	MTREX-202	3147	-	ENSCJAP00000055569	1048 (aa)	-	A0A2R8M8M6
ENSCJAT00000003552	MTREX-203	3099	-	ENSCJAP00000003367	1032 (aa)	-	F7DVK9

Gene Model

Click here to download ENSCJAG00000001773's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000001773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000001773	MTREX	92	36.561	ENSCJAG00000002263	SKIV2L	79	36.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000001773	MTREX	100	98.092	ENSG00000039123	MTREX	100	98.092	Homo_sapiens
ENSCJAG00000001773	MTREX	100	82.670	ENSAPOG00000007814	mtrex	100	82.827	Acanthochromis_polyacanthus
ENSCJAG00000001773	MTREX	100	97.712	ENSAMEG00000013856	MTREX	100	97.712	Ailuropoda_melanoleuca
ENSCJAG00000001773	MTREX	100	81.611	ENSACIG00000015117	mtrex	96	87.983	Amphilophus_citrinellus
ENSCJAG00000001773	MTREX	100	83.049	ENSAOCG00000011884	mtrex	100	82.922	Amphiprion_ocellaris
ENSCJAG00000001773	MTREX	100	82.576	ENSAPEG00000019384	mtrex	100	82.827	Amphiprion_percula
ENSCJAG00000001773	MTREX	100	83.412	ENSATEG00000015117	mtrex	100	83.412	Anabas_testudineus
ENSCJAG00000001773	MTREX	94	94.245	ENSAPLG00000009694	MTREX	98	94.245	Anas_platyrhynchos
ENSCJAG00000001773	MTREX	100	90.076	ENSACAG00000015200	MTREX	96	90.076	Anolis_carolinensis
ENSCJAG00000001773	MTREX	100	100.000	ENSANAG00000023095	MTREX	100	100.000	Aotus_nancymaae
ENSCJAG00000001773	MTREX	100	82.068	ENSACLG00000001921	mtrex	100	82.068	Astatotilapia_calliptera
ENSCJAG00000001773	MTREX	95	83.533	ENSAMXG00000018751	mtrex	99	83.936	Astyanax_mexicanus
ENSCJAG00000001773	MTREX	100	97.424	ENSBTAG00000010518	MTREX	100	97.424	Bos_taurus
ENSCJAG00000001773	MTREX	92	53.628	WBGene00012342	mtr-4	94	53.251	Caenorhabditis_elegans
ENSCJAG00000001773	MTREX	100	97.805	ENSCAFG00000006818	MTREX	100	97.805	Canis_familiaris
ENSCJAG00000001773	MTREX	100	97.805	ENSCAFG00020024352	MTREX	100	97.805	Canis_lupus_dingo
ENSCJAG00000001773	MTREX	100	97.615	ENSCHIG00000024413	MTREX	100	97.615	Capra_hircus
ENSCJAG00000001773	MTREX	94	98.384	ENSTSYG00000007389	MTREX	100	98.384	Carlito_syrichta
ENSCJAG00000001773	MTREX	97	74.048	ENSCAPG00000008696	MTREX	100	74.048	Cavia_aperea
ENSCJAG00000001773	MTREX	100	97.615	ENSCPOG00000009797	MTREX	100	97.615	Cavia_porcellus
ENSCJAG00000001773	MTREX	100	99.714	ENSCCAG00000014177	MTREX	100	99.714	Cebus_capucinus
ENSCJAG00000001773	MTREX	100	97.901	ENSCATG00000042153	MTREX	100	97.901	Cercocebus_atys
ENSCJAG00000001773	MTREX	100	97.233	ENSCLAG00000006622	MTREX	100	97.233	Chinchilla_lanigera
ENSCJAG00000001773	MTREX	100	93.435	ENSCSAG00000016445	MTREX	100	93.435	Chlorocebus_sabaeus
ENSCJAG00000001773	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCJAG00000001773	MTREX	100	91.516	ENSCPBG00000026551	MTREX	94	91.516	Chrysemys_picta_bellii
ENSCJAG00000001773	MTREX	97	66.181	ENSCING00000003239	-	99	65.655	Ciona_intestinalis
ENSCJAG00000001773	MTREX	99	65.085	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSCJAG00000001773	MTREX	100	97.805	ENSCANG00000035770	MTREX	100	97.805	Colobus_angolensis_palliatus
ENSCJAG00000001773	MTREX	100	96.756	ENSCGRG00001024680	Mtrex	98	97.756	Cricetulus_griseus_chok1gshd
ENSCJAG00000001773	MTREX	100	96.756	ENSCGRG00000000307	Mtrex	98	97.756	Cricetulus_griseus_crigri
ENSCJAG00000001773	MTREX	100	81.576	ENSCSEG00000018621	mtrex	98	81.002	Cynoglossus_semilaevis
ENSCJAG00000001773	MTREX	100	82.347	ENSCVAG00000004556	mtrex	100	82.720	Cyprinodon_variegatus
ENSCJAG00000001773	MTREX	100	83.837	ENSDARG00000013457	mtrex	100	83.554	Danio_rerio
ENSCJAG00000001773	MTREX	100	96.667	ENSDNOG00000015375	MTREX	100	96.667	Dasypus_novemcinctus
ENSCJAG00000001773	MTREX	100	97.328	ENSDORG00000006782	Mtrex	100	97.328	Dipodomys_ordii
ENSCJAG00000001773	MTREX	93	66.701	FBgn0001986	Mtr4	94	64.606	Drosophila_melanogaster
ENSCJAG00000001773	MTREX	90	79.263	ENSETEG00000000727	MTREX	89	80.193	Echinops_telfairi
ENSCJAG00000001773	MTREX	99	73.876	ENSEBUG00000012869	mtrex	99	73.876	Eptatretus_burgeri
ENSCJAG00000001773	MTREX	100	97.137	ENSEASG00005013270	MTREX	100	97.137	Equus_asinus_asinus
ENSCJAG00000001773	MTREX	100	97.233	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSCJAG00000001773	MTREX	98	87.391	ENSEEUG00000000527	MTREX	100	88.390	Erinaceus_europaeus
ENSCJAG00000001773	MTREX	99	83.889	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSCJAG00000001773	MTREX	100	97.615	ENSFCAG00000010575	MTREX	100	97.615	Felis_catus
ENSCJAG00000001773	MTREX	100	89.143	ENSFALG00000010850	MTREX	100	89.143	Ficedula_albicollis
ENSCJAG00000001773	MTREX	100	96.660	ENSFDAG00000011199	MTREX	100	96.660	Fukomys_damarensis
ENSCJAG00000001773	MTREX	100	82.938	ENSFHEG00000023014	mtrex	100	82.241	Fundulus_heteroclitus
ENSCJAG00000001773	MTREX	100	79.222	ENSGMOG00000014702	mtrex	100	79.507	Gadus_morhua
ENSCJAG00000001773	MTREX	100	90.649	ENSGALG00000014709	MTREX	83	93.373	Gallus_gallus
ENSCJAG00000001773	MTREX	100	83.033	ENSGAFG00000012425	mtrex	98	87.500	Gambusia_affinis
ENSCJAG00000001773	MTREX	100	78.863	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSCJAG00000001773	MTREX	100	91.039	ENSGAGG00000020036	MTREX	100	90.848	Gopherus_agassizii
ENSCJAG00000001773	MTREX	100	98.187	ENSGGOG00000001867	MTREX	100	98.187	Gorilla_gorilla
ENSCJAG00000001773	MTREX	100	82.068	ENSHBUG00000006229	mtrex	100	82.068	Haplochromis_burtoni
ENSCJAG00000001773	MTREX	100	96.947	ENSHGLG00000019445	SKIV2L2	100	96.947	Heterocephalus_glaber_female
ENSCJAG00000001773	MTREX	100	96.947	ENSHGLG00100011833	SKIV2L2	100	96.947	Heterocephalus_glaber_male
ENSCJAG00000001773	MTREX	92	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSCJAG00000001773	MTREX	100	84.710	ENSIPUG00000024348	skiv2l2	100	84.411	Ictalurus_punctatus
ENSCJAG00000001773	MTREX	100	97.424	ENSSTOG00000010802	MTREX	100	97.424	Ictidomys_tridecemlineatus
ENSCJAG00000001773	MTREX	100	89.313	ENSJJAG00000020975	Mtrex	100	89.122	Jaculus_jaculus
ENSCJAG00000001773	MTREX	100	82.370	ENSKMAG00000012642	mtrex	96	87.043	Kryptolebias_marmoratus
ENSCJAG00000001773	MTREX	100	82.765	ENSLBEG00000019367	mtrex	99	86.340	Labrus_bergylta
ENSCJAG00000001773	MTREX	100	87.905	ENSLACG00000009075	MTREX	100	87.524	Latimeria_chalumnae
ENSCJAG00000001773	MTREX	100	86.667	ENSLOCG00000010186	mtrex	100	86.476	Lepisosteus_oculatus
ENSCJAG00000001773	MTREX	99	95.134	ENSLAFG00000010497	MTREX	100	95.134	Loxodonta_africana
ENSCJAG00000001773	MTREX	100	97.901	ENSMFAG00000031610	MTREX	100	97.901	Macaca_fascicularis
ENSCJAG00000001773	MTREX	100	96.565	ENSMMUG00000010379	MTREX	98	98.927	Macaca_mulatta
ENSCJAG00000001773	MTREX	100	97.901	ENSMNEG00000032746	MTREX	100	97.901	Macaca_nemestrina
ENSCJAG00000001773	MTREX	100	97.901	ENSMLEG00000041051	MTREX	100	97.901	Mandrillus_leucophaeus
ENSCJAG00000001773	MTREX	100	82.336	ENSMAMG00000016753	mtrex	99	85.728	Mastacembelus_armatus
ENSCJAG00000001773	MTREX	100	82.068	ENSMZEG00005000414	mtrex	100	82.068	Maylandia_zebra
ENSCJAG00000001773	MTREX	95	67.611	ENSMGAG00000003980	MTREX	99	67.611	Meleagris_gallopavo
ENSCJAG00000001773	MTREX	99	96.860	ENSMAUG00000010727	Mtrex	98	97.659	Mesocricetus_auratus
ENSCJAG00000001773	MTREX	100	98.381	ENSMICG00000012779	MTREX	100	98.381	Microcebus_murinus
ENSCJAG00000001773	MTREX	100	96.756	ENSMOCG00000019886	Mtrex	100	96.756	Microtus_ochrogaster
ENSCJAG00000001773	MTREX	100	81.309	ENSMMOG00000002476	mtrex	96	87.591	Mola_mola
ENSCJAG00000001773	MTREX	100	92.366	ENSMODG00000019494	MTREX	100	92.366	Monodelphis_domestica
ENSCJAG00000001773	MTREX	92	82.600	ENSMALG00000002917	mtrex	99	82.600	Monopterus_albus
ENSCJAG00000001773	MTREX	100	95.992	MGP_CAROLIEiJ_G0018896	Mtrex	100	95.992	Mus_caroli
ENSCJAG00000001773	MTREX	100	96.279	ENSMUSG00000016018	Mtrex	100	96.279	Mus_musculus
ENSCJAG00000001773	MTREX	100	96.183	MGP_PahariEiJ_G0015967	Mtrex	100	96.183	Mus_pahari
ENSCJAG00000001773	MTREX	100	96.279	MGP_SPRETEiJ_G0019775	Mtrex	100	96.279	Mus_spretus
ENSCJAG00000001773	MTREX	100	97.996	ENSMPUG00000007619	MTREX	100	97.996	Mustela_putorius_furo
ENSCJAG00000001773	MTREX	100	95.814	ENSMLUG00000001152	MTREX	100	95.814	Myotis_lucifugus
ENSCJAG00000001773	MTREX	100	97.042	ENSNGAG00000011938	Mtrex	100	97.042	Nannospalax_galili
ENSCJAG00000001773	MTREX	100	82.163	ENSNBRG00000011293	mtrex	100	82.163	Neolamprologus_brichardi
ENSCJAG00000001773	MTREX	100	94.000	ENSNLEG00000001494	MTREX	100	94.000	Nomascus_leucogenys
ENSCJAG00000001773	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCJAG00000001773	MTREX	100	81.011	ENSOPRG00000008009	MTREX	100	80.916	Ochotona_princeps
ENSCJAG00000001773	MTREX	100	96.565	ENSODEG00000017234	MTREX	100	96.565	Octodon_degus
ENSCJAG00000001773	MTREX	100	81.973	ENSONIG00000007587	mtrex	100	81.973	Oreochromis_niloticus
ENSCJAG00000001773	MTREX	50	93.945	ENSOANG00000004885	-	99	93.945	Ornithorhynchus_anatinus
ENSCJAG00000001773	MTREX	100	97.519	ENSOCUG00000004463	MTREX	100	97.519	Oryctolagus_cuniculus
ENSCJAG00000001773	MTREX	100	82.180	ENSORLG00000005443	mtrex	100	81.896	Oryzias_latipes
ENSCJAG00000001773	MTREX	100	82.085	ENSORLG00020006329	mtrex	100	81.801	Oryzias_latipes_hni
ENSCJAG00000001773	MTREX	100	81.775	ENSORLG00015012924	mtrex	100	81.801	Oryzias_latipes_hsok
ENSCJAG00000001773	MTREX	100	81.474	ENSOMEG00000008825	mtrex	100	81.096	Oryzias_melastigma
ENSCJAG00000001773	MTREX	100	97.710	ENSOGAG00000002886	MTREX	100	97.710	Otolemur_garnettii
ENSCJAG00000001773	MTREX	100	97.336	ENSOARG00000007764	MTREX	100	97.336	Ovis_aries
ENSCJAG00000001773	MTREX	100	98.092	ENSPPAG00000039291	MTREX	100	98.092	Pan_paniscus
ENSCJAG00000001773	MTREX	100	97.615	ENSPPRG00000019701	MTREX	100	97.615	Panthera_pardus
ENSCJAG00000001773	MTREX	100	96.088	ENSPTIG00000009313	MTREX	100	96.088	Panthera_tigris_altaica
ENSCJAG00000001773	MTREX	100	98.092	ENSPTRG00000016878	MTREX	100	98.092	Pan_troglodytes
ENSCJAG00000001773	MTREX	100	97.805	ENSPANG00000009697	MTREX	100	97.805	Papio_anubis
ENSCJAG00000001773	MTREX	100	86.325	ENSPKIG00000020833	mtrex	99	87.894	Paramormyrops_kingsleyae
ENSCJAG00000001773	MTREX	100	91.325	ENSPSIG00000012150	MTREX	100	91.325	Pelodiscus_sinensis
ENSCJAG00000001773	MTREX	100	80.569	ENSPMGG00000002582	mtrex	98	84.631	Periophthalmus_magnuspinnatus
ENSCJAG00000001773	MTREX	95	65.100	ENSPMAG00000009668	mtrex	100	65.462	Petromyzon_marinus
ENSCJAG00000001773	MTREX	92	96.832	ENSPCIG00000024730	MTREX	100	96.832	Phascolarctos_cinereus
ENSCJAG00000001773	MTREX	76	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSCJAG00000001773	MTREX	100	83.318	ENSPLAG00000021311	mtrex	100	83.033	Poecilia_latipinna
ENSCJAG00000001773	MTREX	92	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSCJAG00000001773	MTREX	100	83.033	ENSPREG00000003089	mtrex	100	82.531	Poecilia_reticulata
ENSCJAG00000001773	MTREX	97	99.317	ENSPPYG00000015469	MTREX	98	99.317	Pongo_abelii
ENSCJAG00000001773	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSCJAG00000001773	MTREX	99	91.850	ENSPCOG00000018092	MTREX	100	91.745	Propithecus_coquereli
ENSCJAG00000001773	MTREX	100	97.710	ENSPVAG00000002445	MTREX	100	97.710	Pteropus_vampyrus
ENSCJAG00000001773	MTREX	100	81.973	ENSPNYG00000006164	mtrex	100	81.973	Pundamilia_nyererei
ENSCJAG00000001773	MTREX	100	85.565	ENSPNAG00000008794	mtrex	100	85.565	Pygocentrus_nattereri
ENSCJAG00000001773	MTREX	99	96.923	ENSRNOG00000010125	Mtrex	98	96.923	Rattus_norvegicus
ENSCJAG00000001773	MTREX	100	96.183	ENSRBIG00000034930	MTREX	100	96.183	Rhinopithecus_bieti
ENSCJAG00000001773	MTREX	100	97.901	ENSRROG00000039895	MTREX	100	97.901	Rhinopithecus_roxellana
ENSCJAG00000001773	MTREX	90	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSCJAG00000001773	MTREX	100	99.905	ENSSBOG00000026693	MTREX	100	99.905	Saimiri_boliviensis_boliviensis
ENSCJAG00000001773	MTREX	97	95.386	ENSSHAG00000004600	MTREX	100	95.386	Sarcophilus_harrisii
ENSCJAG00000001773	MTREX	100	86.977	ENSSFOG00015014355	skiv2l2	100	86.787	Scleropages_formosus
ENSCJAG00000001773	MTREX	100	82.292	ENSSMAG00000007572	mtrex	100	82.068	Scophthalmus_maximus
ENSCJAG00000001773	MTREX	100	82.955	ENSSDUG00000023789	mtrex	100	83.112	Seriola_dumerili
ENSCJAG00000001773	MTREX	100	83.333	ENSSLDG00000006301	mtrex	95	88.008	Seriola_lalandi_dorsalis
ENSCJAG00000001773	MTREX	92	99.579	ENSSARG00000008387	MTREX	98	94.537	Sorex_araneus
ENSCJAG00000001773	MTREX	100	79.409	ENSSPUG00000007071	MTREX	100	79.504	Sphenodon_punctatus
ENSCJAG00000001773	MTREX	92	87.513	ENSSPAG00000011319	mtrex	94	87.933	Stegastes_partitus
ENSCJAG00000001773	MTREX	100	97.710	ENSSSCG00000016911	MTREX	100	97.710	Sus_scrofa
ENSCJAG00000001773	MTREX	100	89.037	ENSTGUG00000002480	MTREX	100	88.836	Taeniopygia_guttata
ENSCJAG00000001773	MTREX	100	82.126	ENSTRUG00000014571	mtrex	100	82.180	Takifugu_rubripes
ENSCJAG00000001773	MTREX	100	81.489	ENSTBEG00000007769	MTREX	100	81.489	Tupaia_belangeri
ENSCJAG00000001773	MTREX	100	97.233	ENSTTRG00000008678	MTREX	100	97.233	Tursiops_truncatus
ENSCJAG00000001773	MTREX	100	97.710	ENSUAMG00000023061	MTREX	100	97.710	Ursus_americanus
ENSCJAG00000001773	MTREX	100	97.143	ENSUMAG00000009373	MTREX	99	100.000	Ursus_maritimus
ENSCJAG00000001773	MTREX	100	86.450	ENSVPAG00000011174	MTREX	100	86.450	Vicugna_pacos
ENSCJAG00000001773	MTREX	100	97.996	ENSVVUG00000021337	MTREX	100	97.996	Vulpes_vulpes
ENSCJAG00000001773	MTREX	100	87.524	ENSXETG00000032798	MTREX	100	87.571	Xenopus_tropicalis
ENSCJAG00000001773	MTREX	100	83.128	ENSXMAG00000004799	mtrex	97	87.578	Xiphophorus_maculatus