EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCJAG00000001848 (Gene tree)
Gene ID
100402829
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Callithrix_jacchus
Status
putative
Strand
Minus strand
Length
56267 bases
Position
chrNTIC01034389.1:61483354-61539620
Accession
100402829
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCJAP00000003336tRNA_anti-codonPF01336.253.5e-1111
ENSCJAP00000003334tRNA_anti-codonPF01336.253.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCJAT00000003520RPA1-2021887-ENSCJAP00000003336628 (aa)-F7EMF9
ENSCJAT00000003517RPA1-2011851-ENSCJAP00000003334616 (aa)XP_002747872F7EMG6
Gene Model
Click here to download ENSCJAG00000001848's gene model file
Pathways
Pathway IDPathway NameSource
cjc03030DNA replicationKEGG
cjc03420Nucleotide excision repairKEGG
cjc03430Mismatch repairKEGG
cjc03440Homologous recombinationKEGG
cjc03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000001848's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCJAG00000001848RPA19063.387ENSAPOG00000019409RPA18063.387Acanthochromis_polyacanthus
ENSCJAG00000001848RPA19962.092ENSAPOG00000011658rpa19962.759Acanthochromis_polyacanthus
ENSCJAG00000001848RPA19888.468ENSAMEG00000007706RPA19888.779Ailuropoda_melanoleuca
ENSCJAG00000001848RPA19558.446ENSACIG00000012881RPA19958.574Amphilophus_citrinellus
ENSCJAG00000001848RPA19656.537ENSACIG00000007277rpa19956.197Amphilophus_citrinellus
ENSCJAG00000001848RPA19954.908ENSAOCG00000009003RPA110054.518Amphiprion_ocellaris
ENSCJAG00000001848RPA19962.215ENSAOCG00000023376rpa19962.522Amphiprion_ocellaris
ENSCJAG00000001848RPA19953.673ENSAPEG00000019132RPA19753.870Amphiprion_percula
ENSCJAG00000001848RPA19962.215ENSAPEG00000008634rpa19962.522Amphiprion_percula
ENSCJAG00000001848RPA19954.587ENSATEG00000006443RPA110053.517Anabas_testudineus
ENSCJAG00000001848RPA19563.122ENSATEG00000022024rpa19962.779Anabas_testudineus
ENSCJAG00000001848RPA19865.192ENSAPLG00000012442RPA110065.044Anas_platyrhynchos
ENSCJAG00000001848RPA19962.916ENSACAG00000014490RPA19963.768Anolis_carolinensis
ENSCJAG00000001848RPA19897.512ENSANAG00000023456RPA110097.512Aotus_nancymaae
ENSCJAG00000001848RPA19362.783ENSACLG00000006640rpa19962.435Astatotilapia_calliptera
ENSCJAG00000001848RPA19957.524ENSACLG00000005223RPA19956.740Astatotilapia_calliptera
ENSCJAG00000001848RPA19961.789ENSAMXG00000008418rpa19961.688Astyanax_mexicanus
ENSCJAG00000001848RPA110090.097ENSBTAG00000009711RPA110090.097Bos_taurus
ENSCJAG00000001848RPA110088.636ENSCAFG00000019249RPA110088.636Canis_familiaris
ENSCJAG00000001848RPA110088.636ENSCAFG00020009847RPA110088.636Canis_lupus_dingo
ENSCJAG00000001848RPA110090.097ENSCHIG00000026308RPA110090.097Capra_hircus
ENSCJAG00000001848RPA110090.600ENSTSYG00000003482-10090.438Carlito_syrichta
ENSCJAG00000001848RPA110087.825ENSCPOG00000000035RPA110087.825Cavia_porcellus
ENSCJAG00000001848RPA110086.710ENSCCAG00000010981RPA110086.710Cebus_capucinus
ENSCJAG00000001848RPA19988.599ENSCLAG00000005185-9988.599Chinchilla_lanigera
ENSCJAG00000001848RPA110083.442ENSCLAG00000015045-10083.442Chinchilla_lanigera
ENSCJAG00000001848RPA110082.172ENSCSAG00000013833RPA110082.172Chlorocebus_sabaeus
ENSCJAG00000001848RPA17191.572ENSCHOG00000009454-10091.572Choloepus_hoffmanni
ENSCJAG00000001848RPA19586.565ENSCHOG00000013540-10086.565Choloepus_hoffmanni
ENSCJAG00000001848RPA19976.221ENSCPBG00000020377RPA19976.450Chrysemys_picta_bellii
ENSCJAG00000001848RPA19941.883ENSCING00000023482-9841.914Ciona_intestinalis
ENSCJAG00000001848RPA19889.735ENSCANG00000030911RPA19989.735Colobus_angolensis_palliatus
ENSCJAG00000001848RPA19987.540ENSCGRG00001008197Rpa19986.570Cricetulus_griseus_chok1gshd
ENSCJAG00000001848RPA18186.391ENSCGRG00000000582Rpa19985.207Cricetulus_griseus_crigri
ENSCJAG00000001848RPA19960.033ENSCSEG00000013066rpa19960.033Cynoglossus_semilaevis
ENSCJAG00000001848RPA19950.786ENSCSEG00000012726RPA19952.560Cynoglossus_semilaevis
ENSCJAG00000001848RPA19962.745ENSCVAG00000019431rpa19963.287Cyprinodon_variegatus
ENSCJAG00000001848RPA19653.303ENSCVAG00000013446-9653.005Cyprinodon_variegatus
ENSCJAG00000001848RPA19962.764ENSDARG00000003938rpa19962.013Danio_rerio
ENSCJAG00000001848RPA19888.779ENSDNOG00000017218RPA19888.779Dasypus_novemcinctus
ENSCJAG00000001848RPA110089.286ENSDORG00000006199Rpa19989.577Dipodomys_ordii
ENSCJAG00000001848RPA19942.649FBgn0010173RpA-709842.326Drosophila_melanogaster
ENSCJAG00000001848RPA18384.375ENSETEG00000017608RPA18284.375Echinops_telfairi
ENSCJAG00000001848RPA19890.381ENSEASG00005009372RPA110088.530Equus_asinus_asinus
ENSCJAG00000001848RPA110090.584ENSECAG00000023886RPA110090.584Equus_caballus
ENSCJAG00000001848RPA16889.762ENSEEUG00000002186-6889.762Erinaceus_europaeus
ENSCJAG00000001848RPA18857.248ENSELUG00000006136RPA19956.697Esox_lucius
ENSCJAG00000001848RPA19960.552ENSELUG00000021071rpa19960.582Esox_lucius
ENSCJAG00000001848RPA110087.358ENSFCAG00000006306RPA19987.358Felis_catus
ENSCJAG00000001848RPA110073.829ENSFALG00000006575RPA19973.667Ficedula_albicollis
ENSCJAG00000001848RPA19988.436ENSFDAG00000007720RPA19988.436Fukomys_damarensis
ENSCJAG00000001848RPA19960.855ENSFHEG00000003580rpa19661.121Fundulus_heteroclitus
ENSCJAG00000001848RPA19958.795ENSGMOG00000010382rpa19958.795Gadus_morhua
ENSCJAG00000001848RPA110073.906ENSGALG00000003072RPA19973.906Gallus_gallus
ENSCJAG00000001848RPA19962.273ENSGAFG00000012916rpa19961.576Gambusia_affinis
ENSCJAG00000001848RPA19954.160ENSGAFG00000020953RPA19953.951Gambusia_affinis
ENSCJAG00000001848RPA19960.163ENSGACG00000010856rpa19959.446Gasterosteus_aculeatus
ENSCJAG00000001848RPA19976.221ENSGAGG00000013611RPA19975.570Gopherus_agassizii
ENSCJAG00000001848RPA110090.260ENSGGOG00000014186RPA110090.260Gorilla_gorilla
ENSCJAG00000001848RPA19654.077ENSHBUG00000009348RPA19953.667Haplochromis_burtoni
ENSCJAG00000001848RPA19961.928ENSHBUG00000017773rpa19961.401Haplochromis_burtoni
ENSCJAG00000001848RPA19988.762ENSHGLG00000008846RPA110088.762Heterocephalus_glaber_female
ENSCJAG00000001848RPA19988.762ENSHGLG00100017755-10088.762Heterocephalus_glaber_male
ENSCJAG00000001848RPA110075.487ENSHGLG00100002005-10075.487Heterocephalus_glaber_male
ENSCJAG00000001848RPA110084.253ENSHGLG00100000799-10084.253Heterocephalus_glaber_male
ENSCJAG00000001848RPA19944.677ENSHCOG00000000351RPA19944.516Hippocampus_comes
ENSCJAG00000001848RPA19958.966ENSHCOG00000001401rpa19959.675Hippocampus_comes
ENSCJAG00000001848RPA19961.774ENSIPUG00000004400rpa19961.426Ictalurus_punctatus
ENSCJAG00000001848RPA19881.878ENSSTOG00000022475RPA19981.729Ictidomys_tridecemlineatus
ENSCJAG00000001848RPA19589.796ENSJJAG00000000876Rpa19889.796Jaculus_jaculus
ENSCJAG00000001848RPA19960.294ENSKMAG00000005605rpa19959.740Kryptolebias_marmoratus
ENSCJAG00000001848RPA19954.677ENSKMAG00000000234RPA19954.120Kryptolebias_marmoratus
ENSCJAG00000001848RPA19663.039ENSLBEG00000002281RPA17963.039Labrus_bergylta
ENSCJAG00000001848RPA19961.338ENSLBEG00000021604rpa19960.621Labrus_bergylta
ENSCJAG00000001848RPA18167.265ENSLACG00000007210RPA19668.067Latimeria_chalumnae
ENSCJAG00000001848RPA19966.667ENSLOCG00000006397rpa19966.504Lepisosteus_oculatus
ENSCJAG00000001848RPA19987.097ENSLAFG00000015354RPA19987.097Loxodonta_africana
ENSCJAG00000001848RPA18293.267ENSMFAG00000036138-10093.083Macaca_fascicularis
ENSCJAG00000001848RPA19893.874ENSMMUG00000011604-10093.719Macaca_mulatta
ENSCJAG00000001848RPA110087.034ENSMMUG00000002442-10086.526Macaca_mulatta
ENSCJAG00000001848RPA18989.852ENSMNEG00000029837-10089.852Macaca_nemestrina
ENSCJAG00000001848RPA110091.234ENSMNEG00000031632-9893.390Macaca_nemestrina
ENSCJAG00000001848RPA19887.809ENSMLEG00000038768-10087.974Mandrillus_leucophaeus
ENSCJAG00000001848RPA19962.316ENSMAMG00000017993rpa19961.897Mastacembelus_armatus
ENSCJAG00000001848RPA19951.780ENSMAMG00000020097RPA18462.054Mastacembelus_armatus
ENSCJAG00000001848RPA19957.524ENSMZEG00005024731RPA19956.740Maylandia_zebra
ENSCJAG00000001848RPA19962.092ENSMZEG00005007551rpa19961.564Maylandia_zebra
ENSCJAG00000001848RPA19973.607ENSMGAG00000005315RPA19873.597Meleagris_gallopavo
ENSCJAG00000001848RPA19789.000ENSMAUG00000010474Rpa19989.000Mesocricetus_auratus
ENSCJAG00000001848RPA110091.558ENSMICG00000012867RPA110091.558Microcebus_murinus
ENSCJAG00000001848RPA19987.113ENSMOCG00000013019Rpa19987.113Microtus_ochrogaster
ENSCJAG00000001848RPA19656.926ENSMMOG00000010868RPA19656.926Mola_mola
ENSCJAG00000001848RPA19960.948ENSMMOG00000014292rpa19961.993Mola_mola
ENSCJAG00000001848RPA19983.252ENSMODG00000010549RPA19983.252Monodelphis_domestica
ENSCJAG00000001848RPA19961.928ENSMALG00000011453rpa19962.153Monopterus_albus
ENSCJAG00000001848RPA19461.991ENSMALG00000001208RPA17861.991Monopterus_albus
ENSCJAG00000001848RPA19987.013MGP_CAROLIEiJ_G0016734Rpa19986.688Mus_caroli
ENSCJAG00000001848RPA19985.048ENSMUSG00000000751Rpa19984.727Mus_musculus
ENSCJAG00000001848RPA19987.722MGP_PahariEiJ_G0017871Rpa19987.399Mus_pahari
ENSCJAG00000001848RPA19985.072MGP_SPRETEiJ_G0017577Rpa19984.270Mus_spretus
ENSCJAG00000001848RPA110087.987ENSMPUG00000013119RPA110087.987Mustela_putorius_furo
ENSCJAG00000001848RPA110086.151ENSMLUG00000006113RPA110086.151Myotis_lucifugus
ENSCJAG00000001848RPA19588.115ENSNGAG00000004522Rpa19488.115Nannospalax_galili
ENSCJAG00000001848RPA19655.987ENSNBRG00000009672RPA19555.649Neolamprologus_brichardi
ENSCJAG00000001848RPA19462.586ENSNBRG00000020595rpa19962.241Neolamprologus_brichardi
ENSCJAG00000001848RPA110093.831ENSNLEG00000017149RPA110093.831Nomascus_leucogenys
ENSCJAG00000001848RPA19872.727ENSMEUG00000006714RPA19972.397Notamacropus_eugenii
ENSCJAG00000001848RPA19587.270ENSODEG00000009038RPA19687.270Octodon_degus
ENSCJAG00000001848RPA19962.097ENSONIG00000013135rpa19961.576Oreochromis_niloticus
ENSCJAG00000001848RPA19881.592ENSOANG00000010880RPA19981.758Ornithorhynchus_anatinus
ENSCJAG00000001848RPA110085.294ENSOCUG00000001504RPA110085.294Oryctolagus_cuniculus
ENSCJAG00000001848RPA19953.577ENSORLG00000003368RPA18464.155Oryzias_latipes
ENSCJAG00000001848RPA19962.745ENSORLG00000004856rpa19962.357Oryzias_latipes
ENSCJAG00000001848RPA19962.745ENSORLG00020008980rpa19962.357Oryzias_latipes_hni
ENSCJAG00000001848RPA19952.252ENSORLG00020015284RPA18462.780Oryzias_latipes_hni
ENSCJAG00000001848RPA19953.787ENSORLG00015020383RPA19953.427Oryzias_latipes_hsok
ENSCJAG00000001848RPA17160.000ENSORLG00015005867-9860.000Oryzias_latipes_hsok
ENSCJAG00000001848RPA19962.745ENSORLG00015013982rpa19962.357Oryzias_latipes_hsok
ENSCJAG00000001848RPA19457.045ENSOMEG00000011040RPA19957.045Oryzias_melastigma
ENSCJAG00000001848RPA19960.848ENSOMEG00000004704rpa19960.359Oryzias_melastigma
ENSCJAG00000001848RPA110089.286ENSOGAG00000005581-10089.286Otolemur_garnettii
ENSCJAG00000001848RPA19486.316ENSOGAG00000029379-10086.316Otolemur_garnettii
ENSCJAG00000001848RPA110090.097ENSOARG00000014479RPA110090.097Ovis_aries
ENSCJAG00000001848RPA110093.831ENSPPAG00000039680RPA110093.831Pan_paniscus
ENSCJAG00000001848RPA110087.196ENSPPRG00000011807RPA19987.196Panthera_pardus
ENSCJAG00000001848RPA110087.034ENSPTIG00000007898RPA19987.034Panthera_tigris_altaica
ENSCJAG00000001848RPA110093.831ENSPTRG00000008539RPA110093.831Pan_troglodytes
ENSCJAG00000001848RPA110093.994ENSPANG00000024592RPA110093.994Papio_anubis
ENSCJAG00000001848RPA19462.779ENSPKIG00000008053rpa19462.779Paramormyrops_kingsleyae
ENSCJAG00000001848RPA19775.793ENSPSIG00000015617RPA19975.459Pelodiscus_sinensis
ENSCJAG00000001848RPA19954.153ENSPMGG00000000543RPA19955.439Periophthalmus_magnuspinnatus
ENSCJAG00000001848RPA19959.772ENSPMGG00000011589rpa19861.670Periophthalmus_magnuspinnatus
ENSCJAG00000001848RPA19988.581ENSPEMG00000021061Rpa19988.581Peromyscus_maniculatus_bairdii
ENSCJAG00000001848RPA110082.172ENSPCIG00000019049RPA19982.172Phascolarctos_cinereus
ENSCJAG00000001848RPA19962.520ENSPFOG00000003987rpa19961.765Poecilia_formosa
ENSCJAG00000001848RPA19962.357ENSPLAG00000004984rpa19961.967Poecilia_latipinna
ENSCJAG00000001848RPA19454.019ENSPLAG00000008844-9753.623Poecilia_latipinna
ENSCJAG00000001848RPA19453.933ENSPMEG00000003627-9753.784Poecilia_mexicana
ENSCJAG00000001848RPA19962.520ENSPMEG00000020602rpa19963.316Poecilia_mexicana
ENSCJAG00000001848RPA19157.041ENSPREG00000010174rpa19555.113Poecilia_reticulata
ENSCJAG00000001848RPA19952.430ENSPREG00000010119RPA110050.929Poecilia_reticulata
ENSCJAG00000001848RPA110091.396ENSPCOG00000001799RPA110091.396Propithecus_coquereli
ENSCJAG00000001848RPA19989.739ENSPVAG00000002149RPA19989.739Pteropus_vampyrus
ENSCJAG00000001848RPA19962.255ENSPNYG00000016316rpa19962.392Pundamilia_nyererei
ENSCJAG00000001848RPA19957.210ENSPNYG00000024165RPA19956.426Pundamilia_nyererei
ENSCJAG00000001848RPA19953.710ENSPNAG00000008599rpa19953.291Pygocentrus_nattereri
ENSCJAG00000001848RPA19988.254ENSRNOG00000003123Rpa19988.254Rattus_norvegicus
ENSCJAG00000001848RPA110093.193ENSRBIG00000036587RPA110092.695Rhinopithecus_bieti
ENSCJAG00000001848RPA110087.682ENSRROG00000043278RPA110087.175Rhinopithecus_roxellana
ENSCJAG00000001848RPA19932.212YAR007CRFA17037.986Saccharomyces_cerevisiae
ENSCJAG00000001848RPA19893.058ENSSBOG00000030233RPA110093.058Saimiri_boliviensis_boliviensis
ENSCJAG00000001848RPA19982.979ENSSHAG00000007969RPA19883.306Sarcophilus_harrisii
ENSCJAG00000001848RPA19964.052ENSSFOG00015005362rpa19263.889Scleropages_formosus
ENSCJAG00000001848RPA19952.727ENSSMAG00000019746RPA18463.801Scophthalmus_maximus
ENSCJAG00000001848RPA19963.132ENSSDUG00000011949rpa19962.704Seriola_dumerili
ENSCJAG00000001848RPA19952.269ENSSDUG00000016358RPA18265.158Seriola_dumerili
ENSCJAG00000001848RPA19963.295ENSSLDG00000011806rpa19962.541Seriola_lalandi_dorsalis
ENSCJAG00000001848RPA19951.453ENSSLDG00000020784RPA18164.932Seriola_lalandi_dorsalis
ENSCJAG00000001848RPA18885.294ENSSARG00000007506RPA18985.294Sorex_araneus
ENSCJAG00000001848RPA19772.483ENSSPUG00000007223RPA19972.315Sphenodon_punctatus
ENSCJAG00000001848RPA19962.480ENSSPAG00000009903rpa19961.726Stegastes_partitus
ENSCJAG00000001848RPA19956.863ENSSPAG00000011165RPA19956.863Stegastes_partitus
ENSCJAG00000001848RPA19889.884ENSSSCG00000017822RPA110089.884Sus_scrofa
ENSCJAG00000001848RPA110073.258ENSTGUG00000005775RPA19973.258Taeniopygia_guttata
ENSCJAG00000001848RPA19962.295ENSTRUG00000003616rpa19962.295Takifugu_rubripes
ENSCJAG00000001848RPA19956.886ENSTRUG00000000405RPA17762.557Takifugu_rubripes
ENSCJAG00000001848RPA19963.328ENSTNIG00000016199rpa19962.582Tetraodon_nigroviridis
ENSCJAG00000001848RPA17895.238ENSTBEG00000002709RPA18195.238Tupaia_belangeri
ENSCJAG00000001848RPA19987.967ENSTTRG00000001169RPA19987.967Tursiops_truncatus
ENSCJAG00000001848RPA19092.308ENSUAMG00000015676RPA19992.308Ursus_americanus
ENSCJAG00000001848RPA110088.799ENSUMAG00000009328RPA110088.799Ursus_maritimus
ENSCJAG00000001848RPA110087.662ENSVPAG00000009443RPA110087.662Vicugna_pacos
ENSCJAG00000001848RPA110089.123ENSVVUG00000021715RPA110089.123Vulpes_vulpes
ENSCJAG00000001848RPA19972.995ENSXETG00000013538rpa19973.322Xenopus_tropicalis
ENSCJAG00000001848RPA19161.429ENSXCOG00000010068rpa19460.830Xiphophorus_couchianus
ENSCJAG00000001848RPA19556.314ENSXCOG00000009899-9955.631Xiphophorus_couchianus
ENSCJAG00000001848RPA19963.311ENSXMAG00000010333RPA19461.229Xiphophorus_maculatus
ENSCJAG00000001848RPA19961.047ENSXMAG00000004102rpa19962.257Xiphophorus_maculatus

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