EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000002406 (Gene tree)
Gene ID: 100410650
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 60935 bases
Position: chrNTIC01013335.1:41072977-41133911
Accession: 100410650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000004545	ResIII	PF04851.15	1.5e-10	1	1
ENSCJAP00000004550	ResIII	PF04851.15	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000004797	CHD1L-201	2697	-	ENSCJAP00000004550	898 (aa)	XP_008982456	F7C4D7
ENSCJAT00000004792	CHD1L-202	2598	-	ENSCJAP00000004545	865 (aa)	-	F7C4Y5
ENSCJAT00000004630	CHD1L-204	2397	-	ENSCJAP00000004394	798 (aa)	-	F7ANA5
ENSCJAT00000004739	CHD1L-203	2085	-	ENSCJAP00000004497	694 (aa)	-	F6W7X8

Gene Model

Click here to download ENSCJAG00000002406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000002406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000002406	CHD1L	53	40.556	ENSCJAG00000015819	HELLS	77	40.556
ENSCJAG00000002406	CHD1L	64	44.386	ENSCJAG00000002868	SMARCA1	54	43.471
ENSCJAG00000002406	CHD1L	53	30.214	ENSCJAG00000021080	RAD54L	65	30.214
ENSCJAG00000002406	CHD1L	64	43.805	ENSCJAG00000002735	SMARCA5	54	44.077
ENSCJAG00000002406	CHD1L	52	32.233	ENSCJAG00000000080	-	69	32.233
ENSCJAG00000002406	CHD1L	58	42.105	ENSCJAG00000017920	CHD6	68	40.789
ENSCJAG00000002406	CHD1L	52	30.642	ENSCJAG00000008862	ERCC6L2	75	30.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000002406	CHD1L	99	95.759	ENSG00000131778	CHD1L	100	96.434	Homo_sapiens
ENSCJAG00000002406	CHD1L	96	63.552	ENSAPOG00000001539	chd1l	98	64.302	Acanthochromis_polyacanthus
ENSCJAG00000002406	CHD1L	99	90.067	ENSAMEG00000017063	CHD1L	98	90.487	Ailuropoda_melanoleuca
ENSCJAG00000002406	CHD1L	94	64.988	ENSACIG00000001164	chd1l	97	65.228	Amphilophus_citrinellus
ENSCJAG00000002406	CHD1L	95	63.879	ENSAOCG00000014510	chd1l	85	64.535	Amphiprion_ocellaris
ENSCJAG00000002406	CHD1L	95	61.744	ENSAPEG00000017573	chd1l	94	62.093	Amphiprion_percula
ENSCJAG00000002406	CHD1L	95	61.358	ENSAPEG00000017450	chd1l	94	62.061	Amphiprion_percula
ENSCJAG00000002406	CHD1L	97	64.686	ENSATEG00000013058	chd1l	92	65.421	Anabas_testudineus
ENSCJAG00000002406	CHD1L	94	75.355	ENSAPLG00000009976	CHD1L	94	75.711	Anas_platyrhynchos
ENSCJAG00000002406	CHD1L	97	68.616	ENSACAG00000017686	CHD1L	98	68.616	Anolis_carolinensis
ENSCJAG00000002406	CHD1L	100	97.667	ENSANAG00000024347	CHD1L	100	97.667	Aotus_nancymaae
ENSCJAG00000002406	CHD1L	97	63.440	ENSACLG00000019304	chd1l	96	63.657	Astatotilapia_calliptera
ENSCJAG00000002406	CHD1L	97	59.450	ENSAMXG00000012367	chd1l	85	60.164	Astyanax_mexicanus
ENSCJAG00000002406	CHD1L	99	90.056	ENSBTAG00000020831	CHD1L	99	90.056	Bos_taurus
ENSCJAG00000002406	CHD1L	99	86.734	ENSCAFG00000010944	CHD1L	98	87.104	Canis_familiaris
ENSCJAG00000002406	CHD1L	99	88.457	ENSCAFG00020020121	CHD1L	99	88.851	Canis_lupus_dingo
ENSCJAG00000002406	CHD1L	99	89.675	ENSCHIG00000013871	CHD1L	99	89.921	Capra_hircus
ENSCJAG00000002406	CHD1L	95	93.318	ENSTSYG00000003005	CHD1L	100	93.318	Carlito_syrichta
ENSCJAG00000002406	CHD1L	99	88.071	ENSCPOG00000009000	CHD1L	99	88.071	Cavia_porcellus
ENSCJAG00000002406	CHD1L	100	93.541	ENSCCAG00000036079	CHD1L	100	93.541	Cebus_capucinus
ENSCJAG00000002406	CHD1L	99	95.871	ENSCATG00000031044	CHD1L	99	95.871	Cercocebus_atys
ENSCJAG00000002406	CHD1L	99	88.466	ENSCLAG00000000880	CHD1L	99	89.026	Chinchilla_lanigera
ENSCJAG00000002406	CHD1L	99	95.759	ENSCSAG00000018386	CHD1L	99	95.759	Chlorocebus_sabaeus
ENSCJAG00000002406	CHD1L	95	76.968	ENSCPBG00000002600	CHD1L	96	76.788	Chrysemys_picta_bellii
ENSCJAG00000002406	CHD1L	99	94.308	ENSCANG00000020239	CHD1L	99	94.308	Colobus_angolensis_palliatus
ENSCJAG00000002406	CHD1L	97	85.993	ENSCGRG00001021624	Chd1l	99	84.797	Cricetulus_griseus_chok1gshd
ENSCJAG00000002406	CHD1L	92	87.108	ENSCGRG00000007554	Chd1l	99	85.832	Cricetulus_griseus_crigri
ENSCJAG00000002406	CHD1L	97	62.799	ENSCVAG00000002595	chd1l	90	62.747	Cyprinodon_variegatus
ENSCJAG00000002406	CHD1L	96	65.092	ENSDARG00000015471	chd1l	85	65.323	Danio_rerio
ENSCJAG00000002406	CHD1L	99	90.179	ENSDNOG00000019504	CHD1L	98	90.487	Dasypus_novemcinctus
ENSCJAG00000002406	CHD1L	99	81.909	ENSDORG00000013555	Chd1l	98	82.320	Dipodomys_ordii
ENSCJAG00000002406	CHD1L	89	84.164	ENSETEG00000008445	CHD1L	89	84.505	Echinops_telfairi
ENSCJAG00000002406	CHD1L	70	63.514	ENSEBUG00000005791	chd1l	77	76.596	Eptatretus_burgeri
ENSCJAG00000002406	CHD1L	99	89.876	ENSEASG00005007364	CHD1L	99	91.379	Equus_asinus_asinus
ENSCJAG00000002406	CHD1L	99	89.989	ENSECAG00000008915	CHD1L	99	91.379	Equus_caballus
ENSCJAG00000002406	CHD1L	95	55.006	ENSELUG00000016844	chd1l	83	54.787	Esox_lucius
ENSCJAG00000002406	CHD1L	98	90.661	ENSFCAG00000007777	CHD1L	98	90.661	Felis_catus
ENSCJAG00000002406	CHD1L	96	72.727	ENSFALG00000006087	CHD1L	96	72.957	Ficedula_albicollis
ENSCJAG00000002406	CHD1L	93	91.310	ENSFDAG00000012431	CHD1L	98	90.985	Fukomys_damarensis
ENSCJAG00000002406	CHD1L	97	62.743	ENSFHEG00000012420	chd1l	85	63.763	Fundulus_heteroclitus
ENSCJAG00000002406	CHD1L	97	72.299	ENSGALG00000015038	CHD1L	97	72.727	Gallus_gallus
ENSCJAG00000002406	CHD1L	96	64.343	ENSGAFG00000018198	chd1l	98	61.395	Gambusia_affinis
ENSCJAG00000002406	CHD1L	60	66.412	ENSGACG00000014042	chd1l	100	66.412	Gasterosteus_aculeatus
ENSCJAG00000002406	CHD1L	95	76.190	ENSGAGG00000014432	CHD1L	98	76.190	Gopherus_agassizii
ENSCJAG00000002406	CHD1L	99	95.089	ENSGGOG00000001067	CHD1L	99	95.089	Gorilla_gorilla
ENSCJAG00000002406	CHD1L	97	63.152	ENSHBUG00000007464	chd1l	96	63.889	Haplochromis_burtoni
ENSCJAG00000002406	CHD1L	99	87.346	ENSHGLG00000008933	CHD1L	99	87.346	Heterocephalus_glaber_female
ENSCJAG00000002406	CHD1L	95	85.681	ENSHGLG00100007155	CHD1L	100	86.147	Heterocephalus_glaber_male
ENSCJAG00000002406	CHD1L	93	63.082	ENSHCOG00000012787	chd1l	92	63.441	Hippocampus_comes
ENSCJAG00000002406	CHD1L	97	60.321	ENSIPUG00000022617	chd1l	84	60.956	Ictalurus_punctatus
ENSCJAG00000002406	CHD1L	99	81.117	ENSSTOG00000007032	CHD1L	99	81.117	Ictidomys_tridecemlineatus
ENSCJAG00000002406	CHD1L	98	62.796	ENSKMAG00000014358	chd1l	86	64.106	Kryptolebias_marmoratus
ENSCJAG00000002406	CHD1L	96	62.857	ENSLBEG00000023845	chd1l	96	63.515	Labrus_bergylta
ENSCJAG00000002406	CHD1L	95	66.051	ENSLACG00000006262	CHD1L	85	66.282	Latimeria_chalumnae
ENSCJAG00000002406	CHD1L	94	71.445	ENSLOCG00000010574	chd1l	85	71.129	Lepisosteus_oculatus
ENSCJAG00000002406	CHD1L	95	89.872	ENSLAFG00000018136	CHD1L	99	90.012	Loxodonta_africana
ENSCJAG00000002406	CHD1L	96	94.522	ENSMFAG00000043562	CHD1L	100	95.884	Macaca_fascicularis
ENSCJAG00000002406	CHD1L	99	95.424	ENSMMUG00000009024	CHD1L	99	95.424	Macaca_mulatta
ENSCJAG00000002406	CHD1L	99	95.536	ENSMNEG00000039905	CHD1L	99	95.536	Macaca_nemestrina
ENSCJAG00000002406	CHD1L	99	95.871	ENSMLEG00000030900	CHD1L	99	95.871	Mandrillus_leucophaeus
ENSCJAG00000002406	CHD1L	95	63.341	ENSMAMG00000012822	chd1l	98	61.583	Mastacembelus_armatus
ENSCJAG00000002406	CHD1L	97	63.440	ENSMZEG00005020830	chd1l	86	64.079	Maylandia_zebra
ENSCJAG00000002406	CHD1L	95	71.828	ENSMGAG00000014304	CHD1L	98	73.246	Meleagris_gallopavo
ENSCJAG00000002406	CHD1L	99	91.081	ENSMICG00000002497	CHD1L	99	91.081	Microcebus_murinus
ENSCJAG00000002406	CHD1L	99	86.000	ENSMOCG00000006305	Chd1l	99	86.000	Microtus_ochrogaster
ENSCJAG00000002406	CHD1L	95	60.995	ENSMMOG00000005964	chd1l	90	60.995	Mola_mola
ENSCJAG00000002406	CHD1L	97	81.257	ENSMODG00000018717	CHD1L	96	82.730	Monodelphis_domestica
ENSCJAG00000002406	CHD1L	97	62.984	ENSMALG00000014675	chd1l	85	64.162	Monopterus_albus
ENSCJAG00000002406	CHD1L	99	85.698	MGP_CAROLIEiJ_G0025401	Chd1l	99	85.698	Mus_caroli
ENSCJAG00000002406	CHD1L	99	85.078	ENSMUSG00000028089	Chd1l	99	85.523	Mus_musculus
ENSCJAG00000002406	CHD1L	99	85.554	MGP_PahariEiJ_G0026845	Chd1l	99	85.554	Mus_pahari
ENSCJAG00000002406	CHD1L	99	86.517	MGP_SPRETEiJ_G0026347	Chd1l	99	86.517	Mus_spretus
ENSCJAG00000002406	CHD1L	99	88.406	ENSMPUG00000000615	CHD1L	98	89.103	Mustela_putorius_furo
ENSCJAG00000002406	CHD1L	99	87.265	ENSMLUG00000007573	CHD1L	99	87.486	Myotis_lucifugus
ENSCJAG00000002406	CHD1L	96	83.771	ENSNGAG00000000908	Chd1l	99	83.771	Nannospalax_galili
ENSCJAG00000002406	CHD1L	95	61.645	ENSNBRG00000006021	chd1l	93	61.877	Neolamprologus_brichardi
ENSCJAG00000002406	CHD1L	99	94.866	ENSNLEG00000000179	CHD1L	99	94.866	Nomascus_leucogenys
ENSCJAG00000002406	CHD1L	94	77.882	ENSOPRG00000006973	CHD1L	99	77.870	Ochotona_princeps
ENSCJAG00000002406	CHD1L	99	84.427	ENSODEG00000002494	CHD1L	99	84.872	Octodon_degus
ENSCJAG00000002406	CHD1L	97	63.440	ENSONIG00000003183	chd1l	87	64.311	Oreochromis_niloticus
ENSCJAG00000002406	CHD1L	85	72.927	ENSOANG00000003068	CHD1L	93	73.575	Ornithorhynchus_anatinus
ENSCJAG00000002406	CHD1L	99	86.127	ENSOCUG00000009336	CHD1L	99	86.127	Oryctolagus_cuniculus
ENSCJAG00000002406	CHD1L	97	61.872	ENSORLG00000003673	chd1l	93	63.466	Oryzias_latipes
ENSCJAG00000002406	CHD1L	96	62.745	ENSORLG00020005123	chd1l	93	65.269	Oryzias_latipes_hni
ENSCJAG00000002406	CHD1L	97	61.905	ENSORLG00015001680	chd1l	97	63.213	Oryzias_latipes_hsok
ENSCJAG00000002406	CHD1L	76	61.194	ENSOMEG00000006109	chd1l	80	61.384	Oryzias_melastigma
ENSCJAG00000002406	CHD1L	99	89.409	ENSOGAG00000008775	CHD1L	99	89.409	Otolemur_garnettii
ENSCJAG00000002406	CHD1L	99	89.485	ENSOARG00000020547	CHD1L	98	91.103	Ovis_aries
ENSCJAG00000002406	CHD1L	97	94.822	ENSPPAG00000039193	CHD1L	100	96.610	Pan_paniscus
ENSCJAG00000002406	CHD1L	98	90.547	ENSPPRG00000010258	CHD1L	98	90.547	Panthera_pardus
ENSCJAG00000002406	CHD1L	99	95.759	ENSPTRG00000001220	CHD1L	98	95.923	Pan_troglodytes
ENSCJAG00000002406	CHD1L	99	95.759	ENSPANG00000009170	CHD1L	99	95.759	Papio_anubis
ENSCJAG00000002406	CHD1L	99	63.901	ENSPKIG00000022166	chd1l	97	63.177	Paramormyrops_kingsleyae
ENSCJAG00000002406	CHD1L	95	76.733	ENSPSIG00000012595	CHD1L	95	76.553	Pelodiscus_sinensis
ENSCJAG00000002406	CHD1L	98	83.726	ENSPEMG00000013528	Chd1l	99	84.368	Peromyscus_maniculatus_bairdii
ENSCJAG00000002406	CHD1L	92	81.961	ENSPCIG00000030409	CHD1L	100	82.203	Phascolarctos_cinereus
ENSCJAG00000002406	CHD1L	97	63.886	ENSPFOG00000015948	chd1l	85	64.651	Poecilia_formosa
ENSCJAG00000002406	CHD1L	97	63.564	ENSPLAG00000015145	chd1l	97	63.158	Poecilia_latipinna
ENSCJAG00000002406	CHD1L	97	63.098	ENSPMEG00000008720	chd1l	90	64.311	Poecilia_mexicana
ENSCJAG00000002406	CHD1L	96	62.113	ENSPREG00000017885	chd1l	98	61.856	Poecilia_reticulata
ENSCJAG00000002406	CHD1L	99	95.419	ENSPPYG00000000946	CHD1L	99	95.419	Pongo_abelii
ENSCJAG00000002406	CHD1L	100	76.556	ENSPCAG00000005959	CHD1L	99	76.888	Procavia_capensis
ENSCJAG00000002406	CHD1L	94	80.687	ENSPVAG00000006084	CHD1L	99	80.737	Pteropus_vampyrus
ENSCJAG00000002406	CHD1L	97	63.063	ENSPNYG00000013001	chd1l	96	64.005	Pundamilia_nyererei
ENSCJAG00000002406	CHD1L	95	64.478	ENSPNAG00000011881	chd1l	83	65.182	Pygocentrus_nattereri
ENSCJAG00000002406	CHD1L	99	85.144	ENSRNOG00000017669	Chd1l	99	85.920	Rattus_norvegicus
ENSCJAG00000002406	CHD1L	99	94.308	ENSRBIG00000041272	CHD1L	99	94.308	Rhinopithecus_bieti
ENSCJAG00000002406	CHD1L	97	94.381	ENSRROG00000041354	CHD1L	98	94.279	Rhinopithecus_roxellana
ENSCJAG00000002406	CHD1L	97	77.803	ENSSHAG00000017395	CHD1L	99	77.001	Sarcophilus_harrisii
ENSCJAG00000002406	CHD1L	95	67.483	ENSSFOG00015003649	chd1l	99	64.505	Scleropages_formosus
ENSCJAG00000002406	CHD1L	98	60.133	ENSSMAG00000019377	chd1l	98	59.618	Scophthalmus_maximus
ENSCJAG00000002406	CHD1L	94	63.647	ENSSDUG00000019831	chd1l	94	64.252	Seriola_dumerili
ENSCJAG00000002406	CHD1L	95	63.415	ENSSLDG00000012714	chd1l	95	63.658	Seriola_lalandi_dorsalis
ENSCJAG00000002406	CHD1L	98	71.719	ENSSPUG00000016865	CHD1L	98	73.249	Sphenodon_punctatus
ENSCJAG00000002406	CHD1L	95	64.037	ENSSPAG00000017653	chd1l	90	64.849	Stegastes_partitus
ENSCJAG00000002406	CHD1L	99	87.162	ENSSSCG00000006701	CHD1L	98	88.306	Sus_scrofa
ENSCJAG00000002406	CHD1L	95	74.531	ENSTGUG00000013392	-	98	74.765	Taeniopygia_guttata
ENSCJAG00000002406	CHD1L	94	59.064	ENSTNIG00000004902	chd1l	99	58.879	Tetraodon_nigroviridis
ENSCJAG00000002406	CHD1L	95	86.667	ENSTTRG00000011711	CHD1L	100	86.667	Tursiops_truncatus
ENSCJAG00000002406	CHD1L	99	88.839	ENSUAMG00000021991	CHD1L	98	89.468	Ursus_americanus
ENSCJAG00000002406	CHD1L	99	88.654	ENSUMAG00000009733	CHD1L	98	89.128	Ursus_maritimus
ENSCJAG00000002406	CHD1L	99	88.951	ENSVVUG00000007316	CHD1L	94	89.354	Vulpes_vulpes
ENSCJAG00000002406	CHD1L	97	61.530	ENSXCOG00000008336	chd1l	85	62.097	Xiphophorus_couchianus
ENSCJAG00000002406	CHD1L	97	64.384	ENSXMAG00000015898	chd1l	96	60.000	Xiphophorus_maculatus