EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000002510 (Gene tree)
Gene ID: 100397037
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 10427 bases
Position: chrNTIC01036611.1:12152779-12163205
Accession: 100397037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000004596	PRP38	PF03371.15	2.2e-57	1	1
ENSCJAP00000047197	PRP38	PF03371.15	8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000004844	-	4682	-	ENSCJAP00000004596	546 (aa)	XP_002751207	F7A5D9
ENSCJAT00000062979	-	4459	-	ENSCJAP00000047197	435 (aa)	-	F7ISR6
ENSCJAT00000004839	-	624	-	ENSCJAP00000004591	207 (aa)	-	F7ALV5

Gene Model

Click here to download ENSCJAG00000002510's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000002510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000002510	-	97	93.824	ENSTSYG00000029817	PRPF38B	100	94.023	Carlito_syrichta
ENSCJAG00000002510	-	100	99.451	ENSCCAG00000033941	-	100	99.451	Cebus_capucinus
ENSCJAG00000002510	-	100	98.352	ENSCSAG00000001531	PRPF38B	100	98.352	Chlorocebus_sabaeus
ENSCJAG00000002510	-	100	98.535	ENSCANG00000027711	PRPF38B	100	98.535	Colobus_angolensis_palliatus
ENSCJAG00000002510	-	100	97.802	ENSLAFG00000017112	PRPF38B	100	97.802	Loxodonta_africana
ENSCJAG00000002510	-	100	98.535	ENSMMUG00000010155	PRPF38B	100	98.535	Macaca_mulatta
ENSCJAG00000002510	-	100	98.352	ENSMNEG00000032003	-	100	98.352	Macaca_nemestrina
ENSCJAG00000002510	-	100	97.253	ENSMICG00000032109	PRPF38B	100	97.895	Microcebus_murinus
ENSCJAG00000002510	-	100	95.862	ENSODEG00000007646	PRPF38B	97	95.724	Octodon_degus
ENSCJAG00000002510	-	100	97.011	ENSOCUG00000027424	PRPF38B	100	97.137	Oryctolagus_cuniculus
ENSCJAG00000002510	-	100	98.168	ENSPPYG00000001092	PRPF38B	100	98.168	Pongo_abelii
ENSCJAG00000002510	-	100	97.436	ENSPCOG00000016051	PRPF38B	100	97.895	Propithecus_coquereli
ENSCJAG00000002510	-	100	98.352	ENSRBIG00000043351	PRPF38B	100	98.352	Rhinopithecus_bieti
ENSCJAG00000002510	-	100	98.352	ENSRROG00000029232	PRPF38B	100	98.352	Rhinopithecus_roxellana