EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000002604 (Gene tree)
Gene ID: 100405701
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 15896 bases
Position: chrNTIC01022223.1:135379828-135395723
Accession: 100405701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000042138	tRNA-synt_1g	PF09334.11	6e-11	1	1
ENSCJAP00000042138	Anticodon_1	PF08264.13	2.1e-32	1	1
ENSCJAP00000042138	tRNA-synt_1	PF00133.22	1.8e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000057512	VARS-201	3795	XM_008994174	ENSCJAP00000042138	1264 (aa)	XP_008992422	F6V924

Gene Model

Click here to download ENSCJAG00000002604's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000002604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000002604	VARS	81	50.727	ENSCJAG00000019826	VARS2	91	52.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000002604	VARS	100	97.706	ENSG00000204394	VARS	100	97.706	Homo_sapiens
ENSCJAG00000002604	VARS	98	64.314	ENSAPOG00000020691	vars	99	64.074	Acanthochromis_polyacanthus
ENSCJAG00000002604	VARS	98	64.314	ENSAPOG00000020921	vars	99	64.074	Acanthochromis_polyacanthus
ENSCJAG00000002604	VARS	100	94.783	ENSAMEG00000006417	VARS	100	94.783	Ailuropoda_melanoleuca
ENSCJAG00000002604	VARS	100	65.255	ENSACIG00000013752	vars	100	65.016	Amphilophus_citrinellus
ENSCJAG00000002604	VARS	100	64.419	ENSAOCG00000002447	vars	100	63.994	Amphiprion_ocellaris
ENSCJAG00000002604	VARS	100	64.419	ENSAPEG00000010638	vars	99	64.436	Amphiprion_percula
ENSCJAG00000002604	VARS	100	64.224	ENSATEG00000020219	vars	100	63.987	Anabas_testudineus
ENSCJAG00000002604	VARS	90	70.165	ENSACAG00000029133	-	99	69.991	Anolis_carolinensis
ENSCJAG00000002604	VARS	100	98.497	ENSANAG00000015453	VARS	100	98.497	Aotus_nancymaae
ENSCJAG00000002604	VARS	100	64.729	ENSACLG00000025699	vars	97	64.491	Astatotilapia_calliptera
ENSCJAG00000002604	VARS	94	65.471	ENSAMXG00000017716	vars	95	65.471	Astyanax_mexicanus
ENSCJAG00000002604	VARS	100	94.858	ENSBTAG00000005631	VARS	100	94.858	Bos_taurus
ENSCJAG00000002604	VARS	100	94.225	ENSCAFG00000000636	VARS	100	94.225	Canis_familiaris
ENSCJAG00000002604	VARS	94	94.257	ENSCAFG00020020790	VARS	96	94.257	Canis_lupus_dingo
ENSCJAG00000002604	VARS	100	95.095	ENSCHIG00000011008	VARS	100	95.095	Capra_hircus
ENSCJAG00000002604	VARS	100	96.123	ENSTSYG00000001567	VARS	100	96.123	Carlito_syrichta
ENSCJAG00000002604	VARS	91	90.830	ENSCAPG00000013736	VARS	99	90.830	Cavia_aperea
ENSCJAG00000002604	VARS	100	91.930	ENSCPOG00000000870	VARS	100	91.930	Cavia_porcellus
ENSCJAG00000002604	VARS	100	98.655	ENSCCAG00000035656	VARS	100	98.655	Cebus_capucinus
ENSCJAG00000002604	VARS	100	97.231	ENSCATG00000022394	VARS	100	97.231	Cercocebus_atys
ENSCJAG00000002604	VARS	88	89.151	ENSCLAG00000009470	VARS	92	89.151	Chinchilla_lanigera
ENSCJAG00000002604	VARS	100	97.547	ENSCSAG00000008784	VARS	100	97.547	Chlorocebus_sabaeus
ENSCJAG00000002604	VARS	77	73.819	ENSCPBG00000007943	VARS	96	73.922	Chrysemys_picta_bellii
ENSCJAG00000002604	VARS	100	97.389	ENSCANG00000033570	VARS	100	97.389	Colobus_angolensis_palliatus
ENSCJAG00000002604	VARS	100	92.959	ENSCGRG00001005686	Vars	100	92.959	Cricetulus_griseus_chok1gshd
ENSCJAG00000002604	VARS	92	87.940	ENSCGRG00000013352	Vars	78	87.940	Cricetulus_griseus_crigri
ENSCJAG00000002604	VARS	100	64.190	ENSCSEG00000019652	vars	100	64.032	Cynoglossus_semilaevis
ENSCJAG00000002604	VARS	100	64.957	ENSCVAG00000022398	vars	100	64.957	Cyprinodon_variegatus
ENSCJAG00000002604	VARS	100	64.419	ENSDARG00000044575	vars	100	64.413	Danio_rerio
ENSCJAG00000002604	VARS	84	93.509	ENSDORG00000016433	Vars	95	93.509	Dipodomys_ordii
ENSCJAG00000002604	VARS	69	86.980	ENSETEG00000003824	VARS	76	86.980	Echinops_telfairi
ENSCJAG00000002604	VARS	57	61.401	ENSEBUG00000004637	vars	100	61.676	Eptatretus_burgeri
ENSCJAG00000002604	VARS	100	96.044	ENSEASG00005015673	VARS	100	96.044	Equus_asinus_asinus
ENSCJAG00000002604	VARS	100	95.020	ENSECAG00000014620	VARS	100	95.494	Equus_caballus
ENSCJAG00000002604	VARS	83	92.042	ENSEEUG00000004116	VARS	83	92.042	Erinaceus_europaeus
ENSCJAG00000002604	VARS	100	64.071	ENSELUG00000006550	vars	97	64.071	Esox_lucius
ENSCJAG00000002604	VARS	100	94.699	ENSFCAG00000004510	VARS	100	94.699	Felis_catus
ENSCJAG00000002604	VARS	82	92.165	ENSFDAG00000011401	VARS	100	92.165	Fukomys_damarensis
ENSCJAG00000002604	VARS	100	65.089	ENSFHEG00000010672	vars	100	65.089	Fundulus_heteroclitus
ENSCJAG00000002604	VARS	92	65.947	ENSGMOG00000014908	vars	97	65.947	Gadus_morhua
ENSCJAG00000002604	VARS	100	65.292	ENSGAFG00000021630	vars	100	65.292	Gambusia_affinis
ENSCJAG00000002604	VARS	92	65.998	ENSGACG00000009601	vars	98	65.667	Gasterosteus_aculeatus
ENSCJAG00000002604	VARS	50	64.984	ENSGAGG00000006508	-	91	64.511	Gopherus_agassizii
ENSCJAG00000002604	VARS	100	97.864	ENSGGOG00000011364	VARS	100	97.864	Gorilla_gorilla
ENSCJAG00000002604	VARS	100	64.651	ENSHBUG00000017151	vars	97	64.413	Haplochromis_burtoni
ENSCJAG00000002604	VARS	100	90.427	ENSHGLG00000011646	VARS	100	90.111	Heterocephalus_glaber_female
ENSCJAG00000002604	VARS	93	82.973	ENSHGLG00100018062	VARS	100	82.890	Heterocephalus_glaber_male
ENSCJAG00000002604	VARS	99	64.031	ENSHCOG00000012198	vars	99	64.047	Hippocampus_comes
ENSCJAG00000002604	VARS	100	64.903	ENSIPUG00000005218	vars	100	64.903	Ictalurus_punctatus
ENSCJAG00000002604	VARS	100	94.625	ENSSTOG00000013112	VARS	100	94.625	Ictidomys_tridecemlineatus
ENSCJAG00000002604	VARS	100	91.297	ENSJJAG00000019749	-	100	90.665	Jaculus_jaculus
ENSCJAG00000002604	VARS	100	71.994	ENSJJAG00000015343	-	100	71.994	Jaculus_jaculus
ENSCJAG00000002604	VARS	100	64.692	ENSKMAG00000009455	vars	100	64.455	Kryptolebias_marmoratus
ENSCJAG00000002604	VARS	100	64.585	ENSLBEG00000010341	vars	100	64.348	Labrus_bergylta
ENSCJAG00000002604	VARS	94	62.202	ENSLACG00000015232	VARS	99	62.541	Latimeria_chalumnae
ENSCJAG00000002604	VARS	100	66.250	ENSLOCG00000004240	vars	100	66.250	Lepisosteus_oculatus
ENSCJAG00000002604	VARS	100	93.987	ENSLAFG00000023090	VARS	100	93.592	Loxodonta_africana
ENSCJAG00000002604	VARS	100	97.468	ENSMFAG00000001032	VARS	100	97.468	Macaca_fascicularis
ENSCJAG00000002604	VARS	100	97.468	ENSMMUG00000006828	VARS	100	97.468	Macaca_mulatta
ENSCJAG00000002604	VARS	100	97.468	ENSMNEG00000042072	VARS	100	97.468	Macaca_nemestrina
ENSCJAG00000002604	VARS	100	97.231	ENSMLEG00000039307	VARS	100	97.231	Mandrillus_leucophaeus
ENSCJAG00000002604	VARS	100	64.180	ENSMAMG00000003949	vars	100	64.431	Mastacembelus_armatus
ENSCJAG00000002604	VARS	100	64.729	ENSMZEG00005018327	vars	100	64.088	Maylandia_zebra
ENSCJAG00000002604	VARS	100	92.405	ENSMAUG00000006715	Vars	100	92.405	Mesocricetus_auratus
ENSCJAG00000002604	VARS	100	95.016	ENSMICG00000003548	VARS	100	95.522	Microcebus_murinus
ENSCJAG00000002604	VARS	100	89.715	ENSMOCG00000015404	Vars	100	89.557	Microtus_ochrogaster
ENSCJAG00000002604	VARS	100	63.893	ENSMMOG00000015801	vars	100	63.893	Mola_mola
ENSCJAG00000002604	VARS	100	86.709	ENSMODG00000015204	-	100	86.709	Monodelphis_domestica
ENSCJAG00000002604	VARS	99	64.123	ENSMALG00000022532	vars	99	63.987	Monopterus_albus
ENSCJAG00000002604	VARS	100	92.642	MGP_CAROLIEiJ_G0021491	Vars	100	92.168	Mus_caroli
ENSCJAG00000002604	VARS	100	92.642	ENSMUSG00000007029	Vars	100	92.168	Mus_musculus
ENSCJAG00000002604	VARS	100	92.168	MGP_PahariEiJ_G0020486	Vars	100	91.772	Mus_pahari
ENSCJAG00000002604	VARS	100	92.722	MGP_SPRETEiJ_G0022396	Vars	100	92.247	Mus_spretus
ENSCJAG00000002604	VARS	100	94.858	ENSMPUG00000010821	VARS	100	94.858	Mustela_putorius_furo
ENSCJAG00000002604	VARS	78	93.016	ENSMLUG00000013126	VARS	100	93.623	Myotis_lucifugus
ENSCJAG00000002604	VARS	100	91.851	ENSNGAG00000012151	Vars	100	92.168	Nannospalax_galili
ENSCJAG00000002604	VARS	100	64.574	ENSNBRG00000020520	vars	100	64.336	Neolamprologus_brichardi
ENSCJAG00000002604	VARS	100	97.073	ENSNLEG00000006351	VARS	100	97.073	Nomascus_leucogenys
ENSCJAG00000002604	VARS	100	82.911	ENSMEUG00000011378	VARS	100	82.911	Notamacropus_eugenii
ENSCJAG00000002604	VARS	100	93.908	ENSOPRG00000003607	VARS	100	93.908	Ochotona_princeps
ENSCJAG00000002604	VARS	100	90.823	ENSODEG00000017681	VARS	100	90.269	Octodon_degus
ENSCJAG00000002604	VARS	100	65.129	ENSONIG00000013064	vars	99	67.826	Oreochromis_niloticus
ENSCJAG00000002604	VARS	77	78.478	ENSOANG00000005400	VARS	98	77.646	Ornithorhynchus_anatinus
ENSCJAG00000002604	VARS	100	91.956	ENSOCUG00000022463	VARS	100	92.114	Oryctolagus_cuniculus
ENSCJAG00000002604	VARS	100	64.220	ENSORLG00000013063	vars	100	64.236	Oryzias_latipes
ENSCJAG00000002604	VARS	100	64.765	ENSORLG00020003504	vars	100	64.765	Oryzias_latipes_hni
ENSCJAG00000002604	VARS	100	64.660	ENSORLG00015009001	vars	100	64.660	Oryzias_latipes_hsok
ENSCJAG00000002604	VARS	100	64.660	ENSOMEG00000015016	vars	100	64.660	Oryzias_melastigma
ENSCJAG00000002604	VARS	100	94.620	ENSOGAG00000007515	VARS	100	94.620	Otolemur_garnettii
ENSCJAG00000002604	VARS	100	97.943	ENSPPAG00000034012	VARS	100	97.943	Pan_paniscus
ENSCJAG00000002604	VARS	100	94.858	ENSPPRG00000014855	VARS	100	94.858	Panthera_pardus
ENSCJAG00000002604	VARS	85	94.981	ENSPTIG00000010462	VARS	95	94.963	Panthera_tigris_altaica
ENSCJAG00000002604	VARS	100	97.864	ENSPTRG00000017985	VARS	100	97.864	Pan_troglodytes
ENSCJAG00000002604	VARS	100	95.662	ENSPANG00000014565	VARS	100	95.662	Papio_anubis
ENSCJAG00000002604	VARS	100	63.861	ENSPKIG00000016304	vars	100	63.861	Paramormyrops_kingsleyae
ENSCJAG00000002604	VARS	100	65.406	ENSPMGG00000023909	vars	100	65.248	Periophthalmus_magnuspinnatus
ENSCJAG00000002604	VARS	100	93.434	ENSPEMG00000006639	Vars	100	93.434	Peromyscus_maniculatus_bairdii
ENSCJAG00000002604	VARS	100	86.234	ENSPCIG00000018553	VARS	100	86.234	Phascolarctos_cinereus
ENSCJAG00000002604	VARS	100	65.447	ENSPFOG00000015690	vars	100	65.447	Poecilia_formosa
ENSCJAG00000002604	VARS	100	66.011	ENSPLAG00000009590	vars	100	65.696	Poecilia_latipinna
ENSCJAG00000002604	VARS	100	65.447	ENSPMEG00000004708	vars	100	65.447	Poecilia_mexicana
ENSCJAG00000002604	VARS	100	63.887	ENSPREG00000013264	vars	100	63.558	Poecilia_reticulata
ENSCJAG00000002604	VARS	100	96.123	ENSPPYG00000016460	VARS	100	96.123	Pongo_abelii
ENSCJAG00000002604	VARS	86	92.639	ENSPCAG00000013565	VARS	86	92.639	Procavia_capensis
ENSCJAG00000002604	VARS	100	95.336	ENSPCOG00000010942	VARS	100	95.810	Propithecus_coquereli
ENSCJAG00000002604	VARS	100	91.060	ENSPVAG00000012403	VARS	100	91.060	Pteropus_vampyrus
ENSCJAG00000002604	VARS	100	64.651	ENSPNYG00000022511	vars	100	64.413	Pundamilia_nyererei
ENSCJAG00000002604	VARS	100	64.441	ENSPNAG00000020962	vars	100	64.286	Pygocentrus_nattereri
ENSCJAG00000002604	VARS	100	93.196	ENSRNOG00000000867	Vars	100	93.196	Rattus_norvegicus
ENSCJAG00000002604	VARS	100	97.627	ENSRBIG00000041669	VARS	100	97.627	Rhinopithecus_bieti
ENSCJAG00000002604	VARS	100	97.627	ENSRROG00000045490	VARS	100	97.627	Rhinopithecus_roxellana
ENSCJAG00000002604	VARS	100	98.418	ENSSBOG00000035402	VARS	100	98.418	Saimiri_boliviensis_boliviensis
ENSCJAG00000002604	VARS	100	81.540	ENSSHAG00000006937	VARS	100	81.775	Sarcophilus_harrisii
ENSCJAG00000002604	VARS	100	64.402	ENSSFOG00015014272	vars	100	64.247	Scleropages_formosus
ENSCJAG00000002604	VARS	100	63.467	ENSSMAG00000009596	vars	99	63.305	Scophthalmus_maximus
ENSCJAG00000002604	VARS	100	64.396	ENSSDUG00000014177	vars	100	64.158	Seriola_dumerili
ENSCJAG00000002604	VARS	100	64.319	ENSSLDG00000025316	vars	100	64.081	Seriola_lalandi_dorsalis
ENSCJAG00000002604	VARS	100	64.569	ENSSPAG00000017068	vars	100	64.564	Stegastes_partitus
ENSCJAG00000002604	VARS	100	93.281	ENSSSCG00000038950	VARS	100	93.755	Sus_scrofa
ENSCJAG00000002604	VARS	82	63.619	ENSTRUG00000012307	vars	98	63.662	Takifugu_rubripes
ENSCJAG00000002604	VARS	100	64.541	ENSTNIG00000008011	vars	100	64.380	Tetraodon_nigroviridis
ENSCJAG00000002604	VARS	54	97.004	ENSTBEG00000004728	-	60	97.004	Tupaia_belangeri
ENSCJAG00000002604	VARS	100	86.313	ENSTTRG00000014128	VARS	100	86.313	Tursiops_truncatus
ENSCJAG00000002604	VARS	100	91.431	ENSUAMG00000010424	VARS	100	91.431	Ursus_americanus
ENSCJAG00000002604	VARS	93	94.603	ENSUMAG00000013486	VARS	98	94.127	Ursus_maritimus
ENSCJAG00000002604	VARS	100	93.913	ENSVVUG00000021323	VARS	100	93.676	Vulpes_vulpes
ENSCJAG00000002604	VARS	96	62.571	ENSXETG00000024076	vars	98	61.731	Xenopus_tropicalis
ENSCJAG00000002604	VARS	100	65.276	ENSXCOG00000019172	vars	100	65.276	Xiphophorus_couchianus
ENSCJAG00000002604	VARS	100	65.136	ENSXMAG00000010927	vars	100	65.136	Xiphophorus_maculatus