EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000002732 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 192093 bases
Position: chrNTIC01000001.1:26328276-26520368
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000004998	Ago_hook	PF10427.9	9.9e-21	1	1
ENSCJAP00000064255	Ago_hook	PF10427.9	7.5e-20	1	1
ENSCJAP00000062094	Ago_hook	PF10427.9	7.6e-20	1	1
ENSCJAP00000060054	Ago_hook	PF10427.9	1.5e-19	1	1
ENSCJAP00000005013	Ago_hook	PF10427.9	4.8e-19	1	1
ENSCJAP00000056931	Ago_hook	PF10427.9	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000077253	TNRC6B-203	5322	-	ENSCJAP00000064255	1773 (aa)	-	A0A2R8MS99
ENSCJAT00000085895	TNRC6B-205	5232	-	ENSCJAP00000056931	1649 (aa)	-	A0A2R8P7A8
ENSCJAT00000005266	TNRC6B-201	3093	-	ENSCJAP00000004998	1030 (aa)	-	H9KVV8
ENSCJAT00000085348	TNRC6B-204	5391	-	ENSCJAP00000060054	1702 (aa)	-	A0A2R8PBK8
ENSCJAT00000005282	TNRC6B-206	5214	-	ENSCJAP00000005013	1643 (aa)	-	H9KVV9
ENSCJAT00000080179	TNRC6B-202	5505	-	ENSCJAP00000062094	1834 (aa)	-	A0A2R8PEK3

Gene Model

Click here to download ENSCJAG00000002732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000002732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000002732	TNRC6B	99	51.087	ENSCJAG00000019431	TNRC6C	83	49.161
ENSCJAG00000002732	TNRC6B	99	49.725	ENSCJAG00000020677	TNRC6A	85	49.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000002732	TNRC6B	100	100.000	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSCJAG00000002732	TNRC6B	99	98.873	ENSAMEG00000011025	TNRC6B	99	96.999	Ailuropoda_melanoleuca
ENSCJAG00000002732	TNRC6B	99	95.506	ENSAPLG00000009347	TNRC6B	90	95.787	Anas_platyrhynchos
ENSCJAG00000002732	TNRC6B	99	93.239	ENSACAG00000007281	TNRC6B	89	93.239	Anolis_carolinensis
ENSCJAG00000002732	TNRC6B	100	100.000	ENSANAG00000035042	TNRC6B	100	99.515	Aotus_nancymaae
ENSCJAG00000002732	TNRC6B	89	63.953	ENSAMXG00000008707	tnrc6b	66	66.409	Astyanax_mexicanus
ENSCJAG00000002732	TNRC6B	99	99.155	ENSBTAG00000021076	TNRC6B	99	96.112	Bos_taurus
ENSCJAG00000002732	TNRC6B	99	99.437	ENSCAFG00000001255	TNRC6B	99	96.953	Canis_familiaris
ENSCJAG00000002732	TNRC6B	99	99.437	ENSCAFG00020002189	TNRC6B	99	94.948	Canis_lupus_dingo
ENSCJAG00000002732	TNRC6B	99	99.718	ENSCHIG00000003491	TNRC6B	99	95.442	Capra_hircus
ENSCJAG00000002732	TNRC6B	100	99.718	ENSTSYG00000011836	TNRC6B	100	98.252	Carlito_syrichta
ENSCJAG00000002732	TNRC6B	99	99.718	ENSCPOG00000005705	TNRC6B	98	95.759	Cavia_porcellus
ENSCJAG00000002732	TNRC6B	100	98.763	ENSCCAG00000019912	TNRC6B	100	97.928	Cebus_capucinus
ENSCJAG00000002732	TNRC6B	100	99.718	ENSCATG00000029291	TNRC6B	100	98.060	Cercocebus_atys
ENSCJAG00000002732	TNRC6B	99	99.718	ENSCLAG00000016942	TNRC6B	97	96.202	Chinchilla_lanigera
ENSCJAG00000002732	TNRC6B	96	98.571	ENSCSAG00000006021	TNRC6B	98	94.425	Chlorocebus_sabaeus
ENSCJAG00000002732	TNRC6B	61	98.901	ENSCHOG00000010004	-	62	98.901	Choloepus_hoffmanni
ENSCJAG00000002732	TNRC6B	92	87.074	ENSCPBG00000022932	TNRC6B	99	86.783	Chrysemys_picta_bellii
ENSCJAG00000002732	TNRC6B	100	100.000	ENSCANG00000030776	TNRC6B	100	98.642	Colobus_angolensis_palliatus
ENSCJAG00000002732	TNRC6B	96	97.569	ENSCGRG00001020166	Tnrc6b	95	94.869	Cricetulus_griseus_chok1gshd
ENSCJAG00000002732	TNRC6B	99	97.465	ENSCGRG00000016696	Tnrc6b	98	94.951	Cricetulus_griseus_crigri
ENSCJAG00000002732	TNRC6B	99	98.876	ENSDNOG00000012744	TNRC6B	99	95.562	Dasypus_novemcinctus
ENSCJAG00000002732	TNRC6B	99	99.155	ENSDORG00000003386	Tnrc6b	97	96.181	Dipodomys_ordii
ENSCJAG00000002732	TNRC6B	99	81.777	ENSETEG00000006570	TNRC6B	98	85.575	Echinops_telfairi
ENSCJAG00000002732	TNRC6B	99	99.718	ENSEASG00005005306	TNRC6B	99	96.093	Equus_asinus_asinus
ENSCJAG00000002732	TNRC6B	100	99.718	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSCJAG00000002732	TNRC6B	75	97.436	ENSEEUG00000008690	-	59	97.436	Erinaceus_europaeus
ENSCJAG00000002732	TNRC6B	52	63.907	ENSELUG00000019468	-	71	63.816	Esox_lucius
ENSCJAG00000002732	TNRC6B	99	99.718	ENSFCAG00000004791	TNRC6B	100	96.848	Felis_catus
ENSCJAG00000002732	TNRC6B	99	95.787	ENSFALG00000012195	TNRC6B	94	96.067	Ficedula_albicollis
ENSCJAG00000002732	TNRC6B	100	99.155	ENSFDAG00000021368	TNRC6B	97	96.141	Fukomys_damarensis
ENSCJAG00000002732	TNRC6B	99	95.775	ENSGALG00000012050	TNRC6B	96	88.417	Gallus_gallus
ENSCJAG00000002732	TNRC6B	99	96.056	ENSGAGG00000025188	TNRC6B	98	88.325	Gopherus_agassizii
ENSCJAG00000002732	TNRC6B	100	100.000	ENSGGOG00000008444	TNRC6B	100	99.223	Gorilla_gorilla
ENSCJAG00000002732	TNRC6B	99	99.718	ENSHGLG00000009306	TNRC6B	100	96.578	Heterocephalus_glaber_female
ENSCJAG00000002732	TNRC6B	99	99.718	ENSHGLG00100018108	TNRC6B	98	95.852	Heterocephalus_glaber_male
ENSCJAG00000002732	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	93	50.138	Ictalurus_punctatus
ENSCJAG00000002732	TNRC6B	99	99.437	ENSSTOG00000008927	TNRC6B	97	96.077	Ictidomys_tridecemlineatus
ENSCJAG00000002732	TNRC6B	99	98.028	ENSJJAG00000015779	Tnrc6b	96	95.175	Jaculus_jaculus
ENSCJAG00000002732	TNRC6B	96	78.808	ENSLACG00000000628	-	99	61.205	Latimeria_chalumnae
ENSCJAG00000002732	TNRC6B	81	98.310	ENSLAFG00000014473	TNRC6B	100	96.307	Loxodonta_africana
ENSCJAG00000002732	TNRC6B	100	100.000	ENSMFAG00000003862	TNRC6B	100	98.157	Macaca_fascicularis
ENSCJAG00000002732	TNRC6B	100	100.000	ENSMMUG00000021345	TNRC6B	100	99.030	Macaca_mulatta
ENSCJAG00000002732	TNRC6B	100	100.000	ENSMNEG00000042745	TNRC6B	99	98.105	Macaca_nemestrina
ENSCJAG00000002732	TNRC6B	100	100.000	ENSMLEG00000041780	TNRC6B	100	99.030	Mandrillus_leucophaeus
ENSCJAG00000002732	TNRC6B	99	95.493	ENSMGAG00000012333	TNRC6B	99	88.792	Meleagris_gallopavo
ENSCJAG00000002732	TNRC6B	99	97.746	ENSMAUG00000016123	Tnrc6b	96	94.951	Mesocricetus_auratus
ENSCJAG00000002732	TNRC6B	100	99.155	ENSMICG00000014056	TNRC6B	100	98.062	Microcebus_murinus
ENSCJAG00000002732	TNRC6B	96	96.000	ENSMOCG00000020334	Tnrc6b	97	96.000	Microtus_ochrogaster
ENSCJAG00000002732	TNRC6B	65	80.645	ENSMMOG00000002799	si:dkey-217f16.6	66	69.388	Mola_mola
ENSCJAG00000002732	TNRC6B	99	97.746	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	95.009	Mus_caroli
ENSCJAG00000002732	TNRC6B	99	97.465	ENSMUSG00000047888	Tnrc6b	96	94.836	Mus_musculus
ENSCJAG00000002732	TNRC6B	99	97.746	MGP_PahariEiJ_G0020045	Tnrc6b	96	94.489	Mus_pahari
ENSCJAG00000002732	TNRC6B	99	97.746	MGP_SPRETEiJ_G0020941	Tnrc6b	97	95.457	Mus_spretus
ENSCJAG00000002732	TNRC6B	98	98.873	ENSMPUG00000016442	TNRC6B	99	90.188	Mustela_putorius_furo
ENSCJAG00000002732	TNRC6B	99	99.437	ENSMLUG00000008765	TNRC6B	99	96.618	Myotis_lucifugus
ENSCJAG00000002732	TNRC6B	100	98.315	ENSNGAG00000021294	Tnrc6b	96	95.358	Nannospalax_galili
ENSCJAG00000002732	TNRC6B	100	99.417	ENSNLEG00000015311	TNRC6B	100	99.417	Nomascus_leucogenys
ENSCJAG00000002732	TNRC6B	99	90.442	ENSOPRG00000012054	TNRC6B	86	93.532	Ochotona_princeps
ENSCJAG00000002732	TNRC6B	99	99.718	ENSODEG00000013146	TNRC6B	97	96.202	Octodon_degus
ENSCJAG00000002732	TNRC6B	89	68.889	ENSONIG00000019679	-	85	57.260	Oreochromis_niloticus
ENSCJAG00000002732	TNRC6B	99	99.718	ENSOCUG00000016128	TNRC6B	96	96.550	Oryctolagus_cuniculus
ENSCJAG00000002732	TNRC6B	100	99.718	ENSOGAG00000011096	TNRC6B	100	97.605	Otolemur_garnettii
ENSCJAG00000002732	TNRC6B	99	99.718	ENSOARG00000017238	TNRC6B	96	95.657	Ovis_aries
ENSCJAG00000002732	TNRC6B	100	100.000	ENSPPAG00000028514	TNRC6B	100	99.223	Pan_paniscus
ENSCJAG00000002732	TNRC6B	99	99.718	ENSPPRG00000017741	TNRC6B	100	97.961	Panthera_pardus
ENSCJAG00000002732	TNRC6B	99	93.536	ENSPTIG00000022064	TNRC6B	98	93.764	Panthera_tigris_altaica
ENSCJAG00000002732	TNRC6B	100	100.000	ENSPTRG00000047826	TNRC6B	100	99.223	Pan_troglodytes
ENSCJAG00000002732	TNRC6B	100	100.000	ENSPANG00000009271	TNRC6B	98	99.123	Papio_anubis
ENSCJAG00000002732	TNRC6B	99	95.775	ENSPSIG00000005318	TNRC6B	98	88.043	Pelodiscus_sinensis
ENSCJAG00000002732	TNRC6B	99	97.465	ENSPEMG00000011403	Tnrc6b	96	94.444	Peromyscus_maniculatus_bairdii
ENSCJAG00000002732	TNRC6B	99	93.239	ENSPCIG00000020347	TNRC6B	99	87.045	Phascolarctos_cinereus
ENSCJAG00000002732	TNRC6B	94	56.180	ENSPFOG00000006033	-	58	54.639	Poecilia_formosa
ENSCJAG00000002732	TNRC6B	87	69.863	ENSPLAG00000001418	-	92	49.218	Poecilia_latipinna
ENSCJAG00000002732	TNRC6B	99	100.000	ENSPPYG00000011849	TNRC6B	100	96.106	Pongo_abelii
ENSCJAG00000002732	TNRC6B	96	86.160	ENSPCAG00000008739	TNRC6B	74	93.004	Procavia_capensis
ENSCJAG00000002732	TNRC6B	100	99.437	ENSPCOG00000020790	TNRC6B	100	98.450	Propithecus_coquereli
ENSCJAG00000002732	TNRC6B	95	94.553	ENSPVAG00000004975	TNRC6B	91	95.731	Pteropus_vampyrus
ENSCJAG00000002732	TNRC6B	82	60.714	ENSPNAG00000011713	tnrc6b	64	66.795	Pygocentrus_nattereri
ENSCJAG00000002732	TNRC6B	99	98.028	ENSRNOG00000024907	Tnrc6b	96	94.403	Rattus_norvegicus
ENSCJAG00000002732	TNRC6B	100	100.000	ENSRBIG00000035576	TNRC6B	100	98.819	Rhinopithecus_bieti
ENSCJAG00000002732	TNRC6B	100	100.000	ENSRROG00000031135	TNRC6B	100	98.739	Rhinopithecus_roxellana
ENSCJAG00000002732	TNRC6B	100	100.000	ENSSBOG00000029743	TNRC6B	99	97.745	Saimiri_boliviensis_boliviensis
ENSCJAG00000002732	TNRC6B	99	92.135	ENSSHAG00000009692	TNRC6B	99	87.548	Sarcophilus_harrisii
ENSCJAG00000002732	TNRC6B	74	85.839	ENSSARG00000007971	-	69	88.636	Sorex_araneus
ENSCJAG00000002732	TNRC6B	96	96.338	ENSSPUG00000010801	TNRC6B	94	96.338	Sphenodon_punctatus
ENSCJAG00000002732	TNRC6B	99	98.873	ENSSSCG00000000078	TNRC6B	99	97.830	Sus_scrofa
ENSCJAG00000002732	TNRC6B	93	97.510	ENSTGUG00000010138	-	88	97.510	Taeniopygia_guttata
ENSCJAG00000002732	TNRC6B	99	94.681	ENSTTRG00000011465	TNRC6B	95	98.161	Tursiops_truncatus
ENSCJAG00000002732	TNRC6B	99	99.155	ENSUAMG00000007174	TNRC6B	98	96.625	Ursus_americanus
ENSCJAG00000002732	TNRC6B	99	99.155	ENSUMAG00000014336	TNRC6B	100	96.925	Ursus_maritimus
ENSCJAG00000002732	TNRC6B	82	93.617	ENSVPAG00000001467	TNRC6B	61	100.000	Vicugna_pacos
ENSCJAG00000002732	TNRC6B	100	99.437	ENSVVUG00000007064	TNRC6B	97	98.007	Vulpes_vulpes
ENSCJAG00000002732	TNRC6B	72	50.000	ENSXCOG00000003042	-	87	50.089	Xiphophorus_couchianus