EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000002780 (Gene tree)
Gene ID: 100404811
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 13034 bases
Position: chrNTIC01001113.1:116935117-116948150
Accession: 100404811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000005133	KH_1	PF00013.29	3.7e-07	1	1
ENSCJAP00000005112	KH_1	PF00013.29	3.8e-07	1	1
ENSCJAP00000044970	KH_1	PF00013.29	4.2e-07	1	1
ENSCJAP00000005112	zf-CCHC	PF00098.23	0.00025	1	1
ENSCJAP00000005133	zf-CCHC	PF00098.23	0.00026	1	1
ENSCJAP00000044970	zf-CCHC	PF00098.23	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000005388	SF1-201	1917	-	ENSCJAP00000005112	638 (aa)	XP_017833731	B0KWK3
ENSCJAT00000070964	SF1-204	333	-	ENSCJAP00000057093	110 (aa)	-	A0A2R8MBU3
ENSCJAT00000005410	SF1-203	1920	-	ENSCJAP00000005133	639 (aa)	XP_017833730	U3D370
ENSCJAT00000055994	SF1-202	2022	-	ENSCJAP00000044970	673 (aa)	-	F7FVI5

Gene Model

Click here to download ENSCJAG00000002780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000002780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000002780	SF1	75	68.593	ENSAPOG00000012341	sf1	60	75.814	Acanthochromis_polyacanthus
ENSCJAG00000002780	SF1	99	91.757	ENSAMEG00000017828	SF1	91	94.737	Ailuropoda_melanoleuca
ENSCJAG00000002780	SF1	58	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSCJAG00000002780	SF1	75	68.085	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSCJAG00000002780	SF1	75	68.085	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSCJAG00000002780	SF1	75	69.455	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSCJAG00000002780	SF1	100	99.844	ENSANAG00000026664	-	100	99.844	Aotus_nancymaae
ENSCJAG00000002780	SF1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSCJAG00000002780	SF1	75	68.493	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSCJAG00000002780	SF1	75	70.428	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSCJAG00000002780	SF1	100	100.000	ENSBTAG00000001035	SF1	100	100.000	Bos_taurus
ENSCJAG00000002780	SF1	100	100.000	ENSCAFG00000014239	SF1	100	100.000	Canis_familiaris
ENSCJAG00000002780	SF1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSCJAG00000002780	SF1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSCJAG00000002780	SF1	98	78.889	ENSCAPG00000010762	SF1	100	78.889	Cavia_aperea
ENSCJAG00000002780	SF1	98	99.522	ENSCPOG00000012290	SF1	100	99.628	Cavia_porcellus
ENSCJAG00000002780	SF1	100	80.438	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSCJAG00000002780	SF1	100	100.000	ENSCCAG00000037881	SF1	100	100.000	Cebus_capucinus
ENSCJAG00000002780	SF1	100	100.000	ENSCATG00000011564	SF1	100	100.000	Cercocebus_atys
ENSCJAG00000002780	SF1	83	99.622	ENSCSAG00000007258	SF1	98	100.000	Chlorocebus_sabaeus
ENSCJAG00000002780	SF1	82	84.058	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSCJAG00000002780	SF1	81	86.486	ENSCPBG00000023763	SF1	66	85.300	Chrysemys_picta_bellii
ENSCJAG00000002780	SF1	59	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSCJAG00000002780	SF1	90	47.746	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSCJAG00000002780	SF1	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSCJAG00000002780	SF1	100	99.531	ENSCGRG00001003677	Sf1	100	99.531	Cricetulus_griseus_chok1gshd
ENSCJAG00000002780	SF1	82	97.905	ENSCGRG00000001708	Sf1	99	99.255	Cricetulus_griseus_crigri
ENSCJAG00000002780	SF1	79	66.176	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSCJAG00000002780	SF1	75	68.811	ENSCVAG00000001670	sf1	63	79.167	Cyprinodon_variegatus
ENSCJAG00000002780	SF1	79	81.390	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSCJAG00000002780	SF1	83	99.055	ENSDNOG00000001282	SF1	98	99.442	Dasypus_novemcinctus
ENSCJAG00000002780	SF1	100	100.000	ENSDORG00000016334	Sf1	100	100.000	Dipodomys_ordii
ENSCJAG00000002780	SF1	92	92.479	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSCJAG00000002780	SF1	83	99.244	ENSEASG00005018272	SF1	98	99.628	Equus_asinus_asinus
ENSCJAG00000002780	SF1	83	99.433	ENSECAG00000024544	SF1	98	99.814	Equus_caballus
ENSCJAG00000002780	SF1	62	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSCJAG00000002780	SF1	75	67.899	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSCJAG00000002780	SF1	100	100.000	ENSFCAG00000012231	SF1	100	100.000	Felis_catus
ENSCJAG00000002780	SF1	98	91.250	ENSFDAG00000009833	SF1	99	92.006	Fukomys_damarensis
ENSCJAG00000002780	SF1	75	68.340	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSCJAG00000002780	SF1	52	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSCJAG00000002780	SF1	75	69.126	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSCJAG00000002780	SF1	56	80.260	ENSGACG00000000826	sf1	68	76.722	Gasterosteus_aculeatus
ENSCJAG00000002780	SF1	71	89.011	ENSGAGG00000021691	SF1	72	85.300	Gopherus_agassizii
ENSCJAG00000002780	SF1	58	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSCJAG00000002780	SF1	100	99.843	ENSHGLG00000009541	SF1	100	99.843	Heterocephalus_glaber_female
ENSCJAG00000002780	SF1	68	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSCJAG00000002780	SF1	95	85.406	ENSHGLG00100013879	-	93	94.521	Heterocephalus_glaber_male
ENSCJAG00000002780	SF1	72	86.765	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSCJAG00000002780	SF1	76	67.619	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSCJAG00000002780	SF1	98	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSCJAG00000002780	SF1	73	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSCJAG00000002780	SF1	100	99.844	ENSJJAG00000011788	Sf1	100	99.844	Jaculus_jaculus
ENSCJAG00000002780	SF1	75	68.714	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSCJAG00000002780	SF1	95	67.413	ENSLBEG00000019836	sf1	52	86.053	Labrus_bergylta
ENSCJAG00000002780	SF1	65	78.333	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSCJAG00000002780	SF1	75	73.870	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSCJAG00000002780	SF1	99	95.659	ENSLAFG00000007201	SF1	100	95.659	Loxodonta_africana
ENSCJAG00000002780	SF1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSCJAG00000002780	SF1	100	100.000	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSCJAG00000002780	SF1	100	100.000	ENSMNEG00000037901	SF1	100	100.000	Macaca_nemestrina
ENSCJAG00000002780	SF1	98	100.000	ENSMLEG00000040706	SF1	95	100.000	Mandrillus_leucophaeus
ENSCJAG00000002780	SF1	75	68.217	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSCJAG00000002780	SF1	58	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSCJAG00000002780	SF1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSCJAG00000002780	SF1	100	99.844	ENSMICG00000001202	SF1	100	99.844	Microcebus_murinus
ENSCJAG00000002780	SF1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSCJAG00000002780	SF1	75	67.717	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSCJAG00000002780	SF1	70	94.407	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSCJAG00000002780	SF1	58	82.888	ENSMALG00000020521	sf1	68	76.611	Monopterus_albus
ENSCJAG00000002780	SF1	100	99.374	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSCJAG00000002780	SF1	100	99.374	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSCJAG00000002780	SF1	100	99.374	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSCJAG00000002780	SF1	100	99.374	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSCJAG00000002780	SF1	100	98.748	ENSMPUG00000012684	SF1	100	98.748	Mustela_putorius_furo
ENSCJAG00000002780	SF1	99	99.683	ENSMLUG00000015217	-	99	99.683	Myotis_lucifugus
ENSCJAG00000002780	SF1	80	89.591	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSCJAG00000002780	SF1	100	99.687	ENSNGAG00000005550	Sf1	100	99.687	Nannospalax_galili
ENSCJAG00000002780	SF1	75	68.493	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSCJAG00000002780	SF1	100	99.844	ENSNLEG00000005236	-	100	99.844	Nomascus_leucogenys
ENSCJAG00000002780	SF1	80	98.246	ENSMEUG00000013424	SF1	100	98.493	Notamacropus_eugenii
ENSCJAG00000002780	SF1	74	99.158	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSCJAG00000002780	SF1	100	89.676	ENSODEG00000006102	-	100	87.827	Octodon_degus
ENSCJAG00000002780	SF1	75	68.085	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSCJAG00000002780	SF1	63	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSCJAG00000002780	SF1	99	99.841	ENSOCUG00000026486	SF1	100	99.841	Oryctolagus_cuniculus
ENSCJAG00000002780	SF1	77	67.932	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSCJAG00000002780	SF1	77	68.121	ENSORLG00020011834	sf1	60	75.352	Oryzias_latipes_hni
ENSCJAG00000002780	SF1	75	67.568	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSCJAG00000002780	SF1	75	67.954	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSCJAG00000002780	SF1	100	99.843	ENSOGAG00000016196	SF1	100	99.843	Otolemur_garnettii
ENSCJAG00000002780	SF1	83	95.126	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSCJAG00000002780	SF1	96	100.000	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSCJAG00000002780	SF1	98	100.000	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSCJAG00000002780	SF1	70	98.876	ENSPTIG00000016141	SF1	80	98.876	Panthera_tigris_altaica
ENSCJAG00000002780	SF1	100	100.000	ENSPTRG00000003846	SF1	100	100.000	Pan_troglodytes
ENSCJAG00000002780	SF1	100	95.897	ENSPANG00000020754	SF1	98	100.000	Papio_anubis
ENSCJAG00000002780	SF1	51	79.880	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSCJAG00000002780	SF1	55	87.179	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSCJAG00000002780	SF1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSCJAG00000002780	SF1	55	69.714	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSCJAG00000002780	SF1	100	98.905	ENSPCIG00000018173	SF1	100	98.905	Phascolarctos_cinereus
ENSCJAG00000002780	SF1	59	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSCJAG00000002780	SF1	58	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSCJAG00000002780	SF1	75	69.320	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSCJAG00000002780	SF1	75	69.380	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSCJAG00000002780	SF1	100	99.843	ENSPPYG00000003098	-	100	99.843	Pongo_abelii
ENSCJAG00000002780	SF1	91	95.631	ENSPCAG00000013631	SF1	80	99.257	Procavia_capensis
ENSCJAG00000002780	SF1	100	99.844	ENSPCOG00000027546	SF1	100	99.844	Propithecus_coquereli
ENSCJAG00000002780	SF1	100	96.434	ENSPVAG00000016938	SF1	100	96.434	Pteropus_vampyrus
ENSCJAG00000002780	SF1	75	67.961	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSCJAG00000002780	SF1	75	70.955	ENSPNAG00000013072	sf1	59	78.606	Pygocentrus_nattereri
ENSCJAG00000002780	SF1	100	99.374	ENSRNOG00000021085	Sf1	100	99.374	Rattus_norvegicus
ENSCJAG00000002780	SF1	100	95.931	ENSRBIG00000042818	SF1	100	95.931	Rhinopithecus_bieti
ENSCJAG00000002780	SF1	100	86.470	ENSRROG00000045655	SF1	100	100.000	Rhinopithecus_roxellana
ENSCJAG00000002780	SF1	61	37.819	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCJAG00000002780	SF1	97	80.417	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSCJAG00000002780	SF1	63	91.951	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSCJAG00000002780	SF1	79	67.910	ENSSFOG00015021978	sf1	55	77.053	Scleropages_formosus
ENSCJAG00000002780	SF1	81	65.364	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSCJAG00000002780	SF1	75	67.823	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSCJAG00000002780	SF1	75	67.823	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSCJAG00000002780	SF1	81	95.745	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSCJAG00000002780	SF1	79	82.759	ENSSPUG00000012907	SF1	86	81.382	Sphenodon_punctatus
ENSCJAG00000002780	SF1	75	67.823	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSCJAG00000002780	SF1	100	99.844	ENSSSCG00000013021	SF1	100	99.844	Sus_scrofa
ENSCJAG00000002780	SF1	84	62.799	ENSTNIG00000004820	sf1	80	69.789	Tetraodon_nigroviridis
ENSCJAG00000002780	SF1	96	84.804	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSCJAG00000002780	SF1	81	95.174	ENSTTRG00000008857	SF1	100	95.717	Tursiops_truncatus
ENSCJAG00000002780	SF1	82	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSCJAG00000002780	SF1	82	97.609	ENSUMAG00000007268	SF1	89	100.000	Ursus_maritimus
ENSCJAG00000002780	SF1	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSCJAG00000002780	SF1	83	99.622	ENSVVUG00000028585	SF1	98	100.000	Vulpes_vulpes
ENSCJAG00000002780	SF1	97	69.545	ENSXETG00000008434	sf1	68	81.752	Xenopus_tropicalis
ENSCJAG00000002780	SF1	57	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSCJAG00000002780	SF1	75	68.798	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus