EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000003216 (Gene tree)
Gene ID: 100402370
Gene Symbol: -
Alias: GROS1|LEPRE1|LEPRECAN|MGC117314
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 20166 bases
Position: chrNTIC01036611.1:78669683-78689848
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000046470	2OG-FeII_Oxy	PF03171.20	7.9e-10	1	1
ENSCJAP00000050538	2OG-FeII_Oxy	PF03171.20	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000057241	-	1587	-	ENSCJAP00000050538	528 (aa)	-	F7FAJ0
ENSCJAT00000054468	-	1260	-	ENSCJAP00000046470	419 (aa)	-	F7IK92

Gene Model

Click here to download ENSCJAG00000003216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000003216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000003216	-	82	55.233	ENSCJAG00000007528	P3H3	51	50.754
ENSCJAG00000003216	-	86	64.162	ENSCJAG00000014239	P3H2	56	64.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000003216	-	96	97.653	ENSG00000117385	P3H1	68	96.429	Homo_sapiens
ENSCJAG00000003216	-	91	63.426	ENSAPOG00000007518	p3h1	54	63.426	Acanthochromis_polyacanthus
ENSCJAG00000003216	-	95	89.202	ENSAMEG00000002135	P3H1	61	89.202	Ailuropoda_melanoleuca
ENSCJAG00000003216	-	88	74.850	ENSACIG00000000341	p3h1	60	74.850	Amphilophus_citrinellus
ENSCJAG00000003216	-	87	77.778	ENSAOCG00000006009	p3h1	59	77.778	Amphiprion_ocellaris
ENSCJAG00000003216	-	87	75.926	ENSAPEG00000018038	p3h1	59	75.926	Amphiprion_percula
ENSCJAG00000003216	-	89	66.000	ENSATEG00000004872	p3h1	54	66.000	Anabas_testudineus
ENSCJAG00000003216	-	63	78.873	ENSAPLG00000004260	P3H1	51	78.873	Anas_platyrhynchos
ENSCJAG00000003216	-	83	99.286	ENSANAG00000033369	P3H1	58	97.573	Aotus_nancymaae
ENSCJAG00000003216	-	98	55.046	ENSAMXG00000003540	p3h1	53	55.046	Astyanax_mexicanus
ENSCJAG00000003216	-	100	88.732	ENSBTAG00000017382	P3H1	65	88.318	Bos_taurus
ENSCJAG00000003216	-	95	89.671	ENSCAFG00000002526	P3H1	54	89.671	Canis_familiaris
ENSCJAG00000003216	-	95	89.671	ENSCAFG00020002341	P3H1	54	89.671	Canis_lupus_dingo
ENSCJAG00000003216	-	96	89.202	ENSCHIG00000008788	P3H1	64	89.202	Capra_hircus
ENSCJAG00000003216	-	100	92.019	ENSTSYG00000002325	P3H1	57	92.019	Carlito_syrichta
ENSCJAG00000003216	-	72	90.141	ENSCAPG00000007750	P3H1	51	90.141	Cavia_aperea
ENSCJAG00000003216	-	100	90.141	ENSCPOG00000021271	P3H1	62	90.141	Cavia_porcellus
ENSCJAG00000003216	-	100	98.058	ENSCCAG00000037767	P3H1	58	98.058	Cebus_capucinus
ENSCJAG00000003216	-	100	97.653	ENSCATG00000021814	P3H1	64	97.653	Cercocebus_atys
ENSCJAG00000003216	-	100	89.671	ENSCLAG00000002493	P3H1	62	89.671	Chinchilla_lanigera
ENSCJAG00000003216	-	100	97.653	ENSCSAG00000001170	P3H1	64	97.653	Chlorocebus_sabaeus
ENSCJAG00000003216	-	94	78.404	ENSCPBG00000009965	P3H1	58	78.404	Chrysemys_picta_bellii
ENSCJAG00000003216	-	72	97.183	ENSCANG00000036285	P3H1	51	95.455	Colobus_angolensis_palliatus
ENSCJAG00000003216	-	93	90.141	ENSCGRG00001014713	P3h1	62	90.141	Cricetulus_griseus_chok1gshd
ENSCJAG00000003216	-	81	89.268	ENSCGRG00000001110	P3h1	55	89.268	Cricetulus_griseus_crigri
ENSCJAG00000003216	-	87	67.188	ENSCVAG00000016868	-	57	67.188	Cyprinodon_variegatus
ENSCJAG00000003216	-	95	92.019	ENSDNOG00000025080	P3H1	64	92.019	Dasypus_novemcinctus
ENSCJAG00000003216	-	100	81.690	ENSDORG00000011264	P3h1	69	81.690	Dipodomys_ordii
ENSCJAG00000003216	-	83	66.857	ENSEBUG00000011522	p3h1	52	66.187	Eptatretus_burgeri
ENSCJAG00000003216	-	85	62.500	ENSEBUG00000002855	p3h1	58	63.121	Eptatretus_burgeri
ENSCJAG00000003216	-	95	90.610	ENSEASG00005001292	P3H1	74	90.610	Equus_asinus_asinus
ENSCJAG00000003216	-	95	90.610	ENSECAG00000022675	P3H1	74	90.610	Equus_caballus
ENSCJAG00000003216	-	95	90.909	ENSFCAG00000012192	P3H1	53	90.291	Felis_catus
ENSCJAG00000003216	-	85	85.405	ENSFALG00000010338	P3H1	52	85.405	Ficedula_albicollis
ENSCJAG00000003216	-	91	60.731	ENSGMOG00000002648	p3h1	62	60.731	Gadus_morhua
ENSCJAG00000003216	-	92	80.282	ENSGALG00000004833	P3H1	56	80.282	Gallus_gallus
ENSCJAG00000003216	-	88	66.839	ENSGAFG00000006944	p3h1	51	66.839	Gambusia_affinis
ENSCJAG00000003216	-	82	71.345	ENSGACG00000011029	p3h1	61	71.345	Gasterosteus_aculeatus
ENSCJAG00000003216	-	92	78.404	ENSGAGG00000022900	P3H1	60	78.404	Gopherus_agassizii
ENSCJAG00000003216	-	72	96.244	ENSGGOG00000005745	-	55	96.244	Gorilla_gorilla
ENSCJAG00000003216	-	95	67.839	ENSHBUG00000023670	p3h1	53	67.839	Haplochromis_burtoni
ENSCJAG00000003216	-	100	90.141	ENSHGLG00000019499	P3H1	62	90.141	Heterocephalus_glaber_female
ENSCJAG00000003216	-	100	90.141	ENSHGLG00100013596	P3H1	61	90.141	Heterocephalus_glaber_male
ENSCJAG00000003216	-	92	59.794	ENSHCOG00000009240	p3h1	73	50.820	Hippocampus_comes
ENSCJAG00000003216	-	100	92.488	ENSSTOG00000000119	P3H1	55	92.488	Ictidomys_tridecemlineatus
ENSCJAG00000003216	-	100	89.202	ENSJJAG00000011354	P3h1	63	89.202	Jaculus_jaculus
ENSCJAG00000003216	-	95	64.615	ENSKMAG00000006691	p3h1	54	62.562	Kryptolebias_marmoratus
ENSCJAG00000003216	-	88	66.834	ENSLOCG00000000935	p3h1	51	66.834	Lepisosteus_oculatus
ENSCJAG00000003216	-	100	93.897	ENSLAFG00000031418	P3H1	57	93.897	Loxodonta_africana
ENSCJAG00000003216	-	100	97.653	ENSMFAG00000042833	P3H1	64	97.653	Macaca_fascicularis
ENSCJAG00000003216	-	100	90.141	ENSMMUG00000022381	P3H1	63	90.141	Macaca_mulatta
ENSCJAG00000003216	-	100	97.653	ENSMNEG00000028256	P3H1	67	97.653	Macaca_nemestrina
ENSCJAG00000003216	-	100	97.653	ENSMLEG00000034003	P3H1	64	97.653	Mandrillus_leucophaeus
ENSCJAG00000003216	-	91	58.696	ENSMAMG00000023544	p3h1	57	58.696	Mastacembelus_armatus
ENSCJAG00000003216	-	95	67.839	ENSMZEG00005007416	p3h1	53	67.839	Maylandia_zebra
ENSCJAG00000003216	-	96	89.671	ENSMAUG00000021789	P3h1	62	89.671	Mesocricetus_auratus
ENSCJAG00000003216	-	95	92.019	ENSMICG00000015012	P3H1	74	92.019	Microcebus_murinus
ENSCJAG00000003216	-	93	88.263	ENSMOCG00000016299	P3h1	62	88.263	Microtus_ochrogaster
ENSCJAG00000003216	-	89	85.204	ENSMODG00000017171	P3H1	57	85.204	Monodelphis_domestica
ENSCJAG00000003216	-	94	89.671	MGP_CAROLIEiJ_G0026394	P3h1	73	89.671	Mus_caroli
ENSCJAG00000003216	-	94	89.202	ENSMUSG00000028641	P3h1	65	89.202	Mus_musculus
ENSCJAG00000003216	-	94	88.263	MGP_PahariEiJ_G0028723	P3h1	63	88.263	Mus_pahari
ENSCJAG00000003216	-	94	89.202	MGP_SPRETEiJ_G0027371	P3h1	66	89.202	Mus_spretus
ENSCJAG00000003216	-	96	89.671	ENSMPUG00000013834	P3H1	57	89.671	Mustela_putorius_furo
ENSCJAG00000003216	-	97	91.960	ENSMLUG00000013602	P3H1	61	91.960	Myotis_lucifugus
ENSCJAG00000003216	-	100	90.141	ENSNGAG00000011079	P3h1	63	90.141	Nannospalax_galili
ENSCJAG00000003216	-	85	93.827	ENSMEUG00000010224	P3H1	50	93.827	Notamacropus_eugenii
ENSCJAG00000003216	-	84	95.732	ENSOPRG00000008068	P3H1	54	95.732	Ochotona_princeps
ENSCJAG00000003216	-	100	89.720	ENSODEG00000001470	P3H1	63	89.720	Octodon_degus
ENSCJAG00000003216	-	98	62.617	ENSONIG00000003352	p3h1	62	62.617	Oreochromis_niloticus
ENSCJAG00000003216	-	95	89.202	ENSOCUG00000005602	P3H1	62	89.202	Oryctolagus_cuniculus
ENSCJAG00000003216	-	100	90.610	ENSOGAG00000025285	P3H1	63	90.610	Otolemur_garnettii
ENSCJAG00000003216	-	96	89.202	ENSOARG00000020454	P3H1	64	89.202	Ovis_aries
ENSCJAG00000003216	-	96	97.653	ENSPPAG00000041313	P3H1	67	97.653	Pan_paniscus
ENSCJAG00000003216	-	95	90.909	ENSPPRG00000012621	P3H1	57	90.291	Panthera_pardus
ENSCJAG00000003216	-	72	95.455	ENSPTIG00000010953	P3H1	51	95.455	Panthera_tigris_altaica
ENSCJAG00000003216	-	96	97.653	ENSPTRG00000000617	P3H1	65	97.653	Pan_troglodytes
ENSCJAG00000003216	-	100	97.653	ENSPANG00000024088	P3H1	64	97.653	Papio_anubis
ENSCJAG00000003216	-	91	63.033	ENSPMGG00000009602	p3h1	60	74.691	Periophthalmus_magnuspinnatus
ENSCJAG00000003216	-	94	88.732	ENSPEMG00000001330	P3h1	62	88.732	Peromyscus_maniculatus_bairdii
ENSCJAG00000003216	-	92	62.381	ENSPFOG00000003235	p3h1	51	66.839	Poecilia_formosa
ENSCJAG00000003216	-	82	73.457	ENSPLAG00000022310	p3h1	58	73.457	Poecilia_latipinna
ENSCJAG00000003216	-	88	66.839	ENSPMEG00000013506	p3h1	51	66.839	Poecilia_mexicana
ENSCJAG00000003216	-	98	61.905	ENSPREG00000019520	p3h1	51	66.321	Poecilia_reticulata
ENSCJAG00000003216	-	95	93.427	ENSPCOG00000013340	P3H1	65	93.427	Propithecus_coquereli
ENSCJAG00000003216	-	88	95.122	ENSPVAG00000017479	P3H1	60	90.291	Pteropus_vampyrus
ENSCJAG00000003216	-	95	67.839	ENSPNYG00000006270	p3h1	53	67.839	Pundamilia_nyererei
ENSCJAG00000003216	-	91	63.134	ENSPNAG00000011053	p3h1	55	63.134	Pygocentrus_nattereri
ENSCJAG00000003216	-	94	90.610	ENSRNOG00000053991	P3h1	62	90.610	Rattus_norvegicus
ENSCJAG00000003216	-	95	97.183	ENSRBIG00000034851	P3H1	59	97.183	Rhinopithecus_bieti
ENSCJAG00000003216	-	95	97.183	ENSRROG00000038286	P3H1	59	97.183	Rhinopithecus_roxellana
ENSCJAG00000003216	-	100	99.061	ENSSBOG00000029700	P3H1	62	99.061	Saimiri_boliviensis_boliviensis
ENSCJAG00000003216	-	76	85.981	ENSSHAG00000014745	P3H1	55	85.981	Sarcophilus_harrisii
ENSCJAG00000003216	-	91	62.911	ENSSDUG00000009645	p3h1	53	62.911	Seriola_dumerili
ENSCJAG00000003216	-	91	62.857	ENSSLDG00000015970	p3h1	52	62.857	Seriola_lalandi_dorsalis
ENSCJAG00000003216	-	80	88.272	ENSSPUG00000004838	P3H1	54	88.272	Sphenodon_punctatus
ENSCJAG00000003216	-	99	63.889	ENSSPAG00000017674	p3h1	52	63.889	Stegastes_partitus
ENSCJAG00000003216	-	100	88.732	ENSSSCG00000023920	P3H1	59	93.902	Sus_scrofa
ENSCJAG00000003216	-	91	51.174	ENSTNIG00000007385	p3h1	60	56.977	Tetraodon_nigroviridis
ENSCJAG00000003216	-	88	94.194	ENSTBEG00000015860	P3H1	54	94.194	Tupaia_belangeri
ENSCJAG00000003216	-	95	90.374	ENSUAMG00000000484	P3H1	57	89.320	Ursus_americanus
ENSCJAG00000003216	-	93	89.202	ENSVVUG00000001729	P3H1	54	89.202	Vulpes_vulpes
ENSCJAG00000003216	-	80	72.222	ENSXCOG00000009351	p3h1	57	72.222	Xiphophorus_couchianus
ENSCJAG00000003216	-	88	65.803	ENSXMAG00000002601	p3h1	53	61.905	Xiphophorus_maculatus