EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000003338 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 172247 bases
Position: chrNTIC01033278.1:40032634-40204880
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000006071	La	PF05383.17	5.2e-22	1	1
ENSCJAP00000006069	La	PF05383.17	1.2e-21	1	1
ENSCJAP00000059449	La	PF05383.17	1.2e-21	1	1
ENSCJAP00000006083	La	PF05383.17	1.3e-21	1	1
ENSCJAP00000059069	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000083483	LARP1B-204	5406	-	ENSCJAP00000059449	517 (aa)	-	A0A2R8MGN5
ENSCJAT00000006403	LARP1B-201	2606	-	ENSCJAP00000006069	842 (aa)	-	F7GRC9
ENSCJAT00000006406	LARP1B-205	1008	-	ENSCJAP00000006071	335 (aa)	-	F7GKN2
ENSCJAT00000073929	LARP1B-203	2742	-	ENSCJAP00000059069	913 (aa)	-	A0A2R8MG16
ENSCJAT00000006418	LARP1B-202	4739	-	ENSCJAP00000006083	901 (aa)	-	F7GAE7

Gene Model

Click here to download ENSCJAG00000003338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000003338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000003338	LARP1B	99	61.111	ENSCJAG00000004454	LARP1	86	60.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000003338	LARP1B	100	95.946	ENSG00000138709	LARP1B	96	100.000	Homo_sapiens
ENSCJAG00000003338	LARP1B	99	57.714	ENSAPOG00000020101	larp1b	84	56.908	Acanthochromis_polyacanthus
ENSCJAG00000003338	LARP1B	100	93.134	ENSAMEG00000002748	LARP1B	100	93.134	Ailuropoda_melanoleuca
ENSCJAG00000003338	LARP1B	99	56.083	ENSACIG00000023890	larp1b	83	53.804	Amphilophus_citrinellus
ENSCJAG00000003338	LARP1B	94	55.231	ENSAOCG00000014268	larp1b	84	55.218	Amphiprion_ocellaris
ENSCJAG00000003338	LARP1B	99	58.844	ENSAPEG00000004126	larp1b	84	57.189	Amphiprion_percula
ENSCJAG00000003338	LARP1B	99	57.044	ENSATEG00000017849	larp1b	83	57.111	Anabas_testudineus
ENSCJAG00000003338	LARP1B	99	69.515	ENSAPLG00000010129	LARP1B	98	68.827	Anas_platyrhynchos
ENSCJAG00000003338	LARP1B	99	78.266	ENSACAG00000011338	LARP1B	86	78.452	Anolis_carolinensis
ENSCJAG00000003338	LARP1B	98	89.020	ENSANAG00000034618	LARP1B	97	88.095	Aotus_nancymaae
ENSCJAG00000003338	LARP1B	99	57.110	ENSACLG00000011948	larp1b	83	55.484	Astatotilapia_calliptera
ENSCJAG00000003338	LARP1B	84	59.239	ENSAMXG00000006805	larp1b	81	53.312	Astyanax_mexicanus
ENSCJAG00000003338	LARP1B	98	91.515	ENSBTAG00000012135	LARP1B	99	87.692	Bos_taurus
ENSCJAG00000003338	LARP1B	99	91.766	ENSCAFG00000003831	LARP1B	100	89.858	Canis_familiaris
ENSCJAG00000003338	LARP1B	100	92.836	ENSCAFG00020018899	LARP1B	100	92.836	Canis_lupus_dingo
ENSCJAG00000003338	LARP1B	100	89.881	ENSCHIG00000023144	LARP1B	100	89.881	Capra_hircus
ENSCJAG00000003338	LARP1B	98	85.410	ENSTSYG00000002037	-	93	85.410	Carlito_syrichta
ENSCJAG00000003338	LARP1B	76	92.857	ENSCPOG00000034668	-	93	92.857	Cavia_porcellus
ENSCJAG00000003338	LARP1B	100	98.456	ENSCCAG00000021948	LARP1B	100	98.456	Cebus_capucinus
ENSCJAG00000003338	LARP1B	100	94.981	ENSCATG00000013541	LARP1B	100	94.981	Cercocebus_atys
ENSCJAG00000003338	LARP1B	100	87.761	ENSCLAG00000006448	-	100	87.761	Chinchilla_lanigera
ENSCJAG00000003338	LARP1B	100	94.978	ENSCSAG00000003582	LARP1B	100	94.978	Chlorocebus_sabaeus
ENSCJAG00000003338	LARP1B	99	79.869	ENSCHOG00000005354	LARP1B	99	79.759	Choloepus_hoffmanni
ENSCJAG00000003338	LARP1B	99	79.905	ENSCPBG00000017480	LARP1B	86	77.741	Chrysemys_picta_bellii
ENSCJAG00000003338	LARP1B	100	89.565	ENSCANG00000026958	LARP1B	100	89.565	Colobus_angolensis_palliatus
ENSCJAG00000003338	LARP1B	100	91.642	ENSCGRG00001004660	-	100	91.642	Cricetulus_griseus_chok1gshd
ENSCJAG00000003338	LARP1B	100	91.343	ENSCGRG00000001914	-	100	91.343	Cricetulus_griseus_crigri
ENSCJAG00000003338	LARP1B	99	53.672	ENSCSEG00000013519	larp1b	85	54.307	Cynoglossus_semilaevis
ENSCJAG00000003338	LARP1B	99	55.995	ENSCVAG00000005046	larp1b	83	55.870	Cyprinodon_variegatus
ENSCJAG00000003338	LARP1B	99	54.525	ENSDARG00000061169	larp1b	79	54.874	Danio_rerio
ENSCJAG00000003338	LARP1B	98	90.881	ENSDNOG00000018765	-	100	88.063	Dasypus_novemcinctus
ENSCJAG00000003338	LARP1B	88	84.034	ENSETEG00000012497	LARP1B	88	84.034	Echinops_telfairi
ENSCJAG00000003338	LARP1B	99	51.052	ENSEBUG00000003668	larp1b	87	52.188	Eptatretus_burgeri
ENSCJAG00000003338	LARP1B	99	93.114	ENSEASG00005018106	LARP1B	99	93.114	Equus_asinus_asinus
ENSCJAG00000003338	LARP1B	98	93.009	ENSECAG00000001088	LARP1B	81	88.926	Equus_caballus
ENSCJAG00000003338	LARP1B	74	54.321	ENSELUG00000023774	larp1b	72	54.685	Esox_lucius
ENSCJAG00000003338	LARP1B	100	92.239	ENSFCAG00000014650	-	100	92.239	Felis_catus
ENSCJAG00000003338	LARP1B	99	70.877	ENSFALG00000008098	LARP1B	98	68.662	Ficedula_albicollis
ENSCJAG00000003338	LARP1B	99	56.492	ENSFHEG00000010264	larp1b	79	56.039	Fundulus_heteroclitus
ENSCJAG00000003338	LARP1B	83	65.986	ENSGMOG00000005207	larp1b	62	66.327	Gadus_morhua
ENSCJAG00000003338	LARP1B	99	71.158	ENSGALG00000010207	LARP1B	87	69.222	Gallus_gallus
ENSCJAG00000003338	LARP1B	93	58.984	ENSGAFG00000012012	larp1b	94	58.284	Gambusia_affinis
ENSCJAG00000003338	LARP1B	99	53.182	ENSGACG00000004609	larp1b	83	55.303	Gasterosteus_aculeatus
ENSCJAG00000003338	LARP1B	99	79.715	ENSGAGG00000017209	LARP1B	84	78.163	Gopherus_agassizii
ENSCJAG00000003338	LARP1B	100	96.139	ENSGGOG00000015900	LARP1B	100	96.139	Gorilla_gorilla
ENSCJAG00000003338	LARP1B	99	57.241	ENSHBUG00000009730	larp1b	83	55.603	Haplochromis_burtoni
ENSCJAG00000003338	LARP1B	100	86.726	ENSHGLG00000006728	-	99	87.021	Heterocephalus_glaber_female
ENSCJAG00000003338	LARP1B	97	75.767	ENSHGLG00000013922	-	96	74.618	Heterocephalus_glaber_female
ENSCJAG00000003338	LARP1B	100	87.463	ENSHGLG00100014041	-	96	87.463	Heterocephalus_glaber_male
ENSCJAG00000003338	LARP1B	97	75.767	ENSHGLG00100016491	-	96	74.618	Heterocephalus_glaber_male
ENSCJAG00000003338	LARP1B	76	60.856	ENSHCOG00000000918	larp1b	96	60.462	Hippocampus_comes
ENSCJAG00000003338	LARP1B	85	61.662	ENSIPUG00000012138	larp1b	80	55.135	Ictalurus_punctatus
ENSCJAG00000003338	LARP1B	91	66.993	ENSSTOG00000033183	-	97	66.443	Ictidomys_tridecemlineatus
ENSCJAG00000003338	LARP1B	96	73.520	ENSSTOG00000034510	-	87	73.520	Ictidomys_tridecemlineatus
ENSCJAG00000003338	LARP1B	100	89.286	ENSSTOG00000008596	-	100	89.286	Ictidomys_tridecemlineatus
ENSCJAG00000003338	LARP1B	99	79.154	ENSSTOG00000021917	-	94	80.060	Ictidomys_tridecemlineatus
ENSCJAG00000003338	LARP1B	99	87.087	ENSJJAG00000022360	Larp1b	99	87.087	Jaculus_jaculus
ENSCJAG00000003338	LARP1B	99	54.754	ENSKMAG00000011589	larp1b	85	55.459	Kryptolebias_marmoratus
ENSCJAG00000003338	LARP1B	99	57.257	ENSLBEG00000005655	larp1b	83	56.522	Labrus_bergylta
ENSCJAG00000003338	LARP1B	99	73.127	ENSLACG00000015247	LARP1B	100	69.975	Latimeria_chalumnae
ENSCJAG00000003338	LARP1B	99	65.336	ENSLOCG00000010684	larp1b	92	66.054	Lepisosteus_oculatus
ENSCJAG00000003338	LARP1B	99	93.155	ENSLAFG00000008473	-	99	93.155	Loxodonta_africana
ENSCJAG00000003338	LARP1B	70	91.034	ENSMFAG00000003306	-	94	91.034	Macaca_fascicularis
ENSCJAG00000003338	LARP1B	100	97.297	ENSMFAG00000002218	LARP1B	100	97.297	Macaca_fascicularis
ENSCJAG00000003338	LARP1B	100	97.104	ENSMMUG00000021347	LARP1B	100	97.104	Macaca_mulatta
ENSCJAG00000003338	LARP1B	65	91.608	ENSMNEG00000027747	-	91	92.647	Macaca_nemestrina
ENSCJAG00000003338	LARP1B	91	96.667	ENSMNEG00000030406	LARP1B	100	96.667	Macaca_nemestrina
ENSCJAG00000003338	LARP1B	100	91.028	ENSMLEG00000009306	LARP1B	100	91.247	Mandrillus_leucophaeus
ENSCJAG00000003338	LARP1B	99	57.943	ENSMAMG00000000081	larp1b	85	57.189	Mastacembelus_armatus
ENSCJAG00000003338	LARP1B	77	63.385	ENSMZEG00005002545	larp1b	96	59.686	Maylandia_zebra
ENSCJAG00000003338	LARP1B	99	63.554	ENSMGAG00000004809	LARP1B	98	63.300	Meleagris_gallopavo
ENSCJAG00000003338	LARP1B	100	90.746	ENSMAUG00000007879	-	100	90.746	Mesocricetus_auratus
ENSCJAG00000003338	LARP1B	98	70.392	ENSMICG00000028052	-	99	70.751	Microcebus_murinus
ENSCJAG00000003338	LARP1B	100	94.627	ENSMICG00000036111	LARP1B	100	94.627	Microcebus_murinus
ENSCJAG00000003338	LARP1B	98	77.946	ENSMICG00000037883	-	90	77.644	Microcebus_murinus
ENSCJAG00000003338	LARP1B	79	93.536	ENSMOCG00000001490	Larp1b	95	93.536	Microtus_ochrogaster
ENSCJAG00000003338	LARP1B	98	87.879	ENSMODG00000012300	LARP1B	81	84.842	Monodelphis_domestica
ENSCJAG00000003338	LARP1B	99	57.241	ENSMALG00000003638	larp1b	83	57.016	Monopterus_albus
ENSCJAG00000003338	LARP1B	100	89.552	MGP_CAROLIEiJ_G0024962	Larp1b	100	89.552	Mus_caroli
ENSCJAG00000003338	LARP1B	100	90.746	ENSMUSG00000025762	Larp1b	100	90.746	Mus_musculus
ENSCJAG00000003338	LARP1B	100	90.448	MGP_PahariEiJ_G0026403	Larp1b	100	90.448	Mus_pahari
ENSCJAG00000003338	LARP1B	100	90.746	MGP_SPRETEiJ_G0025897	Larp1b	100	90.746	Mus_spretus
ENSCJAG00000003338	LARP1B	98	93.009	ENSMPUG00000017365	LARP1B	81	89.701	Mustela_putorius_furo
ENSCJAG00000003338	LARP1B	99	82.814	ENSMLUG00000010229	LARP1B	97	82.536	Myotis_lucifugus
ENSCJAG00000003338	LARP1B	77	58.000	ENSNBRG00000023846	larp1b	78	55.311	Neolamprologus_brichardi
ENSCJAG00000003338	LARP1B	100	96.332	ENSNLEG00000013819	LARP1B	100	96.332	Nomascus_leucogenys
ENSCJAG00000003338	LARP1B	87	83.810	ENSMEUG00000010308	LARP1B	88	83.810	Notamacropus_eugenii
ENSCJAG00000003338	LARP1B	98	75.380	ENSOPRG00000005478	LARP1B	99	71.916	Ochotona_princeps
ENSCJAG00000003338	LARP1B	100	87.761	ENSODEG00000001292	-	100	87.761	Octodon_degus
ENSCJAG00000003338	LARP1B	99	56.805	ENSONIG00000012386	larp1b	93	55.917	Oreochromis_niloticus
ENSCJAG00000003338	LARP1B	98	92.705	ENSOCUG00000013330	LARP1B	98	87.929	Oryctolagus_cuniculus
ENSCJAG00000003338	LARP1B	99	56.847	ENSORLG00000017954	larp1b	82	56.278	Oryzias_latipes
ENSCJAG00000003338	LARP1B	99	56.847	ENSORLG00020013081	larp1b	82	56.278	Oryzias_latipes_hni
ENSCJAG00000003338	LARP1B	99	57.093	ENSORLG00015009580	larp1b	82	56.229	Oryzias_latipes_hsok
ENSCJAG00000003338	LARP1B	99	56.847	ENSOMEG00000004210	larp1b	82	56.092	Oryzias_melastigma
ENSCJAG00000003338	LARP1B	99	90.226	ENSOGAG00000005771	LARP1B	98	90.035	Otolemur_garnettii
ENSCJAG00000003338	LARP1B	98	90.303	ENSOARG00000015300	LARP1B	100	87.882	Ovis_aries
ENSCJAG00000003338	LARP1B	100	95.560	ENSPPAG00000030439	LARP1B	100	95.560	Pan_paniscus
ENSCJAG00000003338	LARP1B	100	92.239	ENSPPRG00000002743	-	100	92.239	Panthera_pardus
ENSCJAG00000003338	LARP1B	100	92.239	ENSPTIG00000011225	LARP1B	100	92.239	Panthera_tigris_altaica
ENSCJAG00000003338	LARP1B	100	95.753	ENSPTRG00000016437	LARP1B	100	95.753	Pan_troglodytes
ENSCJAG00000003338	LARP1B	100	96.911	ENSPANG00000012488	LARP1B	100	96.911	Papio_anubis
ENSCJAG00000003338	LARP1B	92	55.089	ENSPKIG00000014360	larp1b	88	53.959	Paramormyrops_kingsleyae
ENSCJAG00000003338	LARP1B	99	78.766	ENSPSIG00000012885	LARP1B	93	77.752	Pelodiscus_sinensis
ENSCJAG00000003338	LARP1B	78	62.957	ENSPMGG00000007207	larp1b	83	61.222	Periophthalmus_magnuspinnatus
ENSCJAG00000003338	LARP1B	99	51.638	ENSPMAG00000002700	larp1b	94	52.903	Petromyzon_marinus
ENSCJAG00000003338	LARP1B	99	85.094	ENSPCIG00000026516	LARP1B	98	84.595	Phascolarctos_cinereus
ENSCJAG00000003338	LARP1B	99	56.459	ENSPFOG00000019519	larp1b	82	55.626	Poecilia_formosa
ENSCJAG00000003338	LARP1B	97	51.301	ENSPFOG00000022837	-	78	50.366	Poecilia_formosa
ENSCJAG00000003338	LARP1B	99	57.829	ENSPLAG00000007115	larp1b	82	56.878	Poecilia_latipinna
ENSCJAG00000003338	LARP1B	99	57.569	ENSPMEG00000001224	larp1b	82	56.659	Poecilia_mexicana
ENSCJAG00000003338	LARP1B	80	55.594	ENSPREG00000005955	-	89	55.245	Poecilia_reticulata
ENSCJAG00000003338	LARP1B	98	87.538	ENSPCAG00000007546	LARP1B	99	84.759	Procavia_capensis
ENSCJAG00000003338	LARP1B	100	93.731	ENSPCOG00000021874	LARP1B	100	93.731	Propithecus_coquereli
ENSCJAG00000003338	LARP1B	100	83.481	ENSPVAG00000005373	LARP1B	99	83.481	Pteropus_vampyrus
ENSCJAG00000003338	LARP1B	77	63.902	ENSPNYG00000017357	larp1b	96	60.313	Pundamilia_nyererei
ENSCJAG00000003338	LARP1B	99	54.719	ENSPNAG00000008823	larp1b	84	55.724	Pygocentrus_nattereri
ENSCJAG00000003338	LARP1B	100	92.239	ENSRNOG00000038366	Larp1b	100	92.239	Rattus_norvegicus
ENSCJAG00000003338	LARP1B	100	95.367	ENSRBIG00000039982	-	100	95.367	Rhinopithecus_bieti
ENSCJAG00000003338	LARP1B	100	86.866	ENSRBIG00000038568	-	92	86.866	Rhinopithecus_bieti
ENSCJAG00000003338	LARP1B	100	97.297	ENSRROG00000030771	LARP1B	100	97.297	Rhinopithecus_roxellana
ENSCJAG00000003338	LARP1B	100	77.015	ENSRROG00000038525	-	96	77.015	Rhinopithecus_roxellana
ENSCJAG00000003338	LARP1B	98	88.182	ENSSHAG00000014474	LARP1B	99	83.784	Sarcophilus_harrisii
ENSCJAG00000003338	LARP1B	99	56.492	ENSSMAG00000006347	larp1b	92	54.952	Scophthalmus_maximus
ENSCJAG00000003338	LARP1B	99	57.816	ENSSDUG00000004182	larp1b	82	56.972	Seriola_dumerili
ENSCJAG00000003338	LARP1B	79	61.573	ENSSLDG00000014613	larp1b	70	60.028	Seriola_lalandi_dorsalis
ENSCJAG00000003338	LARP1B	98	74.560	ENSSPUG00000011837	LARP1B	97	69.444	Sphenodon_punctatus
ENSCJAG00000003338	LARP1B	99	57.013	ENSSPAG00000017772	larp1b	82	56.801	Stegastes_partitus
ENSCJAG00000003338	LARP1B	98	91.793	ENSSSCG00000034280	LARP1B	99	90.722	Sus_scrofa
ENSCJAG00000003338	LARP1B	73	55.556	ENSSSCG00000040491	-	99	72.414	Sus_scrofa
ENSCJAG00000003338	LARP1B	90	73.773	ENSTGUG00000002098	-	98	66.439	Taeniopygia_guttata
ENSCJAG00000003338	LARP1B	99	55.116	ENSTRUG00000005612	larp1b	82	54.254	Takifugu_rubripes
ENSCJAG00000003338	LARP1B	98	42.982	ENSTNIG00000012398	larp1b	94	54.077	Tetraodon_nigroviridis
ENSCJAG00000003338	LARP1B	87	91.429	ENSTBEG00000004177	LARP1B	88	86.667	Tupaia_belangeri
ENSCJAG00000003338	LARP1B	100	78.603	ENSTTRG00000012984	LARP1B	99	78.603	Tursiops_truncatus
ENSCJAG00000003338	LARP1B	100	82.687	ENSUAMG00000016938	-	91	95.266	Ursus_americanus
ENSCJAG00000003338	LARP1B	99	91.766	ENSUMAG00000007373	LARP1B	98	90.476	Ursus_maritimus
ENSCJAG00000003338	LARP1B	98	79.764	ENSVPAG00000007223	LARP1B	99	77.925	Vicugna_pacos
ENSCJAG00000003338	LARP1B	98	92.705	ENSVVUG00000011307	LARP1B	100	90.392	Vulpes_vulpes
ENSCJAG00000003338	LARP1B	99	62.293	ENSXETG00000022512	larp1b	88	60.044	Xenopus_tropicalis
ENSCJAG00000003338	LARP1B	73	61.066	ENSXCOG00000004435	larp1b	76	55.995	Xiphophorus_couchianus
ENSCJAG00000003338	LARP1B	99	57.486	ENSXMAG00000008150	larp1b	82	56.583	Xiphophorus_maculatus