EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000003570 (Gene tree)
Gene ID: 100400862
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 115950 bases
Position: chrNTIC01022223.1:12002944-12118893
Accession: 100400862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000006498	Exo_endo_phos	PF03372.23	8.6e-13	1	1
ENSCJAP00000045925	Exo_endo_phos	PF03372.23	1e-12	1	1
ENSCJAP00000006498	DUF1866	PF08952.11	6e-60	1	1
ENSCJAP00000045925	DUF1866	PF08952.11	7.7e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000052506	SYNJ2-201	7473	XM_002806737	ENSCJAP00000045925	1497 (aa)	XP_002806783	U3FTN3
ENSCJAT00000006862	SYNJ2-202	3864	-	ENSCJAP00000006498	1287 (aa)	-	F7G8V3

Gene Model

Click here to download ENSCJAG00000003570's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc00562	Inositol phosphate metabolism	KEGG
cjc01100	Metabolic pathways	KEGG
cjc04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000003570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000003570	SYNJ2	82	53.618	ENSCJAG00000009187	SYNJ1	86	51.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000003570	SYNJ2	100	96.661	ENSG00000078269	SYNJ2	99	98.519	Homo_sapiens
ENSCJAG00000003570	SYNJ2	94	89.082	ENSAMEG00000009581	SYNJ2	100	81.905	Ailuropoda_melanoleuca
ENSCJAG00000003570	SYNJ2	97	78.834	ENSAPLG00000002563	SYNJ2	94	73.662	Anas_platyrhynchos
ENSCJAG00000003570	SYNJ2	98	74.961	ENSACAG00000004945	SYNJ2	94	71.012	Anolis_carolinensis
ENSCJAG00000003570	SYNJ2	100	98.990	ENSANAG00000026575	SYNJ2	100	98.990	Aotus_nancymaae
ENSCJAG00000003570	SYNJ2	97	88.381	ENSBTAG00000000817	SYNJ2	100	82.415	Bos_taurus
ENSCJAG00000003570	SYNJ2	94	89.992	ENSCAFG00000000644	SYNJ2	100	84.358	Canis_familiaris
ENSCJAG00000003570	SYNJ2	97	89.269	ENSCAFG00020015809	SYNJ2	100	84.061	Canis_lupus_dingo
ENSCJAG00000003570	SYNJ2	97	87.580	ENSCHIG00000011077	SYNJ2	100	82.548	Capra_hircus
ENSCJAG00000003570	SYNJ2	97	93.408	ENSTSYG00000014342	SYNJ2	97	93.408	Carlito_syrichta
ENSCJAG00000003570	SYNJ2	93	88.113	ENSCAPG00000000287	SYNJ2	100	83.024	Cavia_aperea
ENSCJAG00000003570	SYNJ2	97	91.660	ENSCPOG00000009144	SYNJ2	95	93.191	Cavia_porcellus
ENSCJAG00000003570	SYNJ2	100	98.757	ENSCCAG00000025484	SYNJ2	100	98.757	Cebus_capucinus
ENSCJAG00000003570	SYNJ2	100	96.817	ENSCATG00000042943	SYNJ2	100	96.817	Cercocebus_atys
ENSCJAG00000003570	SYNJ2	97	92.074	ENSCLAG00000004730	SYNJ2	100	86.786	Chinchilla_lanigera
ENSCJAG00000003570	SYNJ2	100	94.793	ENSCSAG00000013130	SYNJ2	100	94.793	Chlorocebus_sabaeus
ENSCJAG00000003570	SYNJ2	52	97.273	ENSCHOG00000000343	-	52	97.273	Choloepus_hoffmanni
ENSCJAG00000003570	SYNJ2	97	79.984	ENSCPBG00000016273	SYNJ2	98	72.273	Chrysemys_picta_bellii
ENSCJAG00000003570	SYNJ2	97	96.563	ENSCANG00000040349	SYNJ2	100	96.563	Colobus_angolensis_palliatus
ENSCJAG00000003570	SYNJ2	98	89.277	ENSCGRG00001004257	Synj2	99	85.734	Cricetulus_griseus_chok1gshd
ENSCJAG00000003570	SYNJ2	94	89.547	ENSCGRG00000001656	Synj2	97	86.811	Cricetulus_griseus_crigri
ENSCJAG00000003570	SYNJ2	95	78.325	ENSDNOG00000015900	SYNJ2	100	84.300	Dasypus_novemcinctus
ENSCJAG00000003570	SYNJ2	96	86.423	ENSDORG00000014128	Synj2	99	81.972	Dipodomys_ordii
ENSCJAG00000003570	SYNJ2	80	92.043	ENSETEG00000017418	SYNJ2	82	92.043	Echinops_telfairi
ENSCJAG00000003570	SYNJ2	97	90.778	ENSEASG00005018902	SYNJ2	100	85.933	Equus_asinus_asinus
ENSCJAG00000003570	SYNJ2	97	90.778	ENSECAG00000012646	SYNJ2	94	85.933	Equus_caballus
ENSCJAG00000003570	SYNJ2	53	77.193	ENSEEUG00000015796	-	58	77.193	Erinaceus_europaeus
ENSCJAG00000003570	SYNJ2	100	89.433	ENSFCAG00000010854	SYNJ2	100	89.277	Felis_catus
ENSCJAG00000003570	SYNJ2	90	77.854	ENSFALG00000012593	SYNJ2	98	69.674	Ficedula_albicollis
ENSCJAG00000003570	SYNJ2	95	90.797	ENSFDAG00000016352	SYNJ2	100	85.286	Fukomys_damarensis
ENSCJAG00000003570	SYNJ2	97	78.383	ENSGALG00000013727	SYNJ2	98	71.124	Gallus_gallus
ENSCJAG00000003570	SYNJ2	97	79.442	ENSGAGG00000009857	SYNJ2	95	73.652	Gopherus_agassizii
ENSCJAG00000003570	SYNJ2	100	96.817	ENSGGOG00000012210	SYNJ2	100	96.817	Gorilla_gorilla
ENSCJAG00000003570	SYNJ2	97	91.259	ENSHGLG00000007534	SYNJ2	100	86.379	Heterocephalus_glaber_female
ENSCJAG00000003570	SYNJ2	96	91.315	ENSHGLG00100009973	SYNJ2	100	86.244	Heterocephalus_glaber_male
ENSCJAG00000003570	SYNJ2	94	92.033	ENSSTOG00000016474	SYNJ2	99	87.568	Ictidomys_tridecemlineatus
ENSCJAG00000003570	SYNJ2	94	88.797	ENSJJAG00000014436	Synj2	100	90.991	Jaculus_jaculus
ENSCJAG00000003570	SYNJ2	82	69.382	ENSLACG00000007316	SYNJ2	99	70.009	Latimeria_chalumnae
ENSCJAG00000003570	SYNJ2	94	87.899	ENSLAFG00000011979	SYNJ2	100	83.845	Loxodonta_africana
ENSCJAG00000003570	SYNJ2	93	96.810	ENSMFAG00000040552	SYNJ2	100	96.944	Macaca_fascicularis
ENSCJAG00000003570	SYNJ2	81	96.756	ENSMMUG00000007153	SYNJ2	100	96.756	Macaca_mulatta
ENSCJAG00000003570	SYNJ2	100	96.817	ENSMNEG00000017211	SYNJ2	100	96.817	Macaca_nemestrina
ENSCJAG00000003570	SYNJ2	100	91.789	ENSMLEG00000024911	SYNJ2	100	91.789	Mandrillus_leucophaeus
ENSCJAG00000003570	SYNJ2	94	77.642	ENSMGAG00000012839	SYNJ2	99	74.706	Meleagris_gallopavo
ENSCJAG00000003570	SYNJ2	98	88.959	ENSMAUG00000022212	Synj2	97	88.160	Mesocricetus_auratus
ENSCJAG00000003570	SYNJ2	100	90.365	ENSMICG00000015804	SYNJ2	100	90.365	Microcebus_murinus
ENSCJAG00000003570	SYNJ2	97	89.415	ENSMOCG00000020054	Synj2	97	88.432	Microtus_ochrogaster
ENSCJAG00000003570	SYNJ2	97	87.179	ENSMODG00000007783	SYNJ2	100	80.557	Monodelphis_domestica
ENSCJAG00000003570	SYNJ2	99	86.922	MGP_CAROLIEiJ_G0021026	Synj2	100	92.738	Mus_caroli
ENSCJAG00000003570	SYNJ2	98	87.768	ENSMUSG00000023805	Synj2	100	92.738	Mus_musculus
ENSCJAG00000003570	SYNJ2	98	88.483	MGP_PahariEiJ_G0023344	Synj2	100	92.587	Mus_pahari
ENSCJAG00000003570	SYNJ2	98	87.450	MGP_SPRETEiJ_G0021931	Synj2	100	92.436	Mus_spretus
ENSCJAG00000003570	SYNJ2	97	87.490	ENSMPUG00000005323	SYNJ2	98	85.942	Mustela_putorius_furo
ENSCJAG00000003570	SYNJ2	91	89.031	ENSMLUG00000000324	SYNJ2	100	82.353	Myotis_lucifugus
ENSCJAG00000003570	SYNJ2	97	91.419	ENSNGAG00000014859	Synj2	100	86.510	Nannospalax_galili
ENSCJAG00000003570	SYNJ2	100	92.284	ENSNLEG00000010750	SYNJ2	100	92.284	Nomascus_leucogenys
ENSCJAG00000003570	SYNJ2	92	83.641	ENSMEUG00000003493	SYNJ2	95	83.641	Notamacropus_eugenii
ENSCJAG00000003570	SYNJ2	93	80.140	ENSOPRG00000009648	SYNJ2	93	80.140	Ochotona_princeps
ENSCJAG00000003570	SYNJ2	97	90.764	ENSODEG00000007709	SYNJ2	94	92.979	Octodon_degus
ENSCJAG00000003570	SYNJ2	94	89.046	ENSOCUG00000004762	SYNJ2	100	84.326	Oryctolagus_cuniculus
ENSCJAG00000003570	SYNJ2	90	90.320	ENSOGAG00000000488	SYNJ2	100	91.537	Otolemur_garnettii
ENSCJAG00000003570	SYNJ2	94	88.595	ENSOARG00000004304	SYNJ2	100	81.812	Ovis_aries
ENSCJAG00000003570	SYNJ2	99	94.589	ENSPPAG00000028831	SYNJ2	99	94.456	Pan_paniscus
ENSCJAG00000003570	SYNJ2	100	89.510	ENSPPRG00000009068	SYNJ2	100	89.355	Panthera_pardus
ENSCJAG00000003570	SYNJ2	97	89.389	ENSPTIG00000018780	SYNJ2	97	89.228	Panthera_tigris_altaica
ENSCJAG00000003570	SYNJ2	100	96.739	ENSPTRG00000018739	SYNJ2	100	96.739	Pan_troglodytes
ENSCJAG00000003570	SYNJ2	100	96.817	ENSPANG00000010755	SYNJ2	100	96.817	Papio_anubis
ENSCJAG00000003570	SYNJ2	92	79.699	ENSPSIG00000014659	SYNJ2	98	71.809	Pelodiscus_sinensis
ENSCJAG00000003570	SYNJ2	94	89.867	ENSPEMG00000006247	Synj2	97	88.305	Peromyscus_maniculatus_bairdii
ENSCJAG00000003570	SYNJ2	97	87.340	ENSPCIG00000010179	SYNJ2	100	81.275	Phascolarctos_cinereus
ENSCJAG00000003570	SYNJ2	100	93.992	ENSPPYG00000017130	SYNJ2	100	93.992	Pongo_abelii
ENSCJAG00000003570	SYNJ2	83	91.935	ENSPCAG00000009217	SYNJ2	90	75.993	Procavia_capensis
ENSCJAG00000003570	SYNJ2	100	92.696	ENSPCOG00000026910	SYNJ2	100	92.696	Propithecus_coquereli
ENSCJAG00000003570	SYNJ2	97	85.817	ENSPVAG00000006131	SYNJ2	100	81.521	Pteropus_vampyrus
ENSCJAG00000003570	SYNJ2	98	85.972	ENSRNOG00000017114	Synj2	100	84.113	Rattus_norvegicus
ENSCJAG00000003570	SYNJ2	99	91.829	ENSRBIG00000044126	SYNJ2	100	91.756	Rhinopithecus_bieti
ENSCJAG00000003570	SYNJ2	100	96.739	ENSRROG00000027755	SYNJ2	100	96.739	Rhinopithecus_roxellana
ENSCJAG00000003570	SYNJ2	100	98.912	ENSSBOG00000034876	SYNJ2	100	98.912	Saimiri_boliviensis_boliviensis
ENSCJAG00000003570	SYNJ2	94	86.985	ENSSHAG00000018881	SYNJ2	100	80.652	Sarcophilus_harrisii
ENSCJAG00000003570	SYNJ2	97	75.990	ENSSPUG00000000491	SYNJ2	99	70.866	Sphenodon_punctatus
ENSCJAG00000003570	SYNJ2	100	89.899	ENSSSCG00000012315	SYNJ2	100	89.666	Sus_scrofa
ENSCJAG00000003570	SYNJ2	93	77.246	ENSTGUG00000011082	SYNJ2	100	73.859	Taeniopygia_guttata
ENSCJAG00000003570	SYNJ2	82	81.081	ENSTBEG00000015827	SYNJ2	85	81.081	Tupaia_belangeri
ENSCJAG00000003570	SYNJ2	97	84.282	ENSTTRG00000009677	SYNJ2	100	79.880	Tursiops_truncatus
ENSCJAG00000003570	SYNJ2	53	77.652	ENSUAMG00000021958	-	98	78.030	Ursus_americanus
ENSCJAG00000003570	SYNJ2	78	82.044	ENSUMAG00000012826	SYNJ2	96	81.944	Ursus_maritimus
ENSCJAG00000003570	SYNJ2	77	89.014	ENSVVUG00000007407	SYNJ2	100	89.014	Vulpes_vulpes
ENSCJAG00000003570	SYNJ2	97	67.994	ENSXETG00000034066	synj2	89	64.000	Xenopus_tropicalis