EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000003613 (Gene tree)
Gene ID: 100401902
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 87324 bases
Position: chrNTIC01000002.1:11365632-11452955
Accession: 100401902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000006586	DRY_EERY	PF09750.9	9.6e-33	1	1
ENSCJAP00000006617	DRY_EERY	PF09750.9	1e-32	1	1
ENSCJAP00000006604	Surp	PF01805.20	1.1e-27	1	2
ENSCJAP00000006604	Surp	PF01805.20	1.1e-27	2	2
ENSCJAP00000006586	Surp	PF01805.20	1.5e-27	1	2
ENSCJAP00000006586	Surp	PF01805.20	1.5e-27	2	2
ENSCJAP00000006617	Surp	PF01805.20	1.7e-27	1	2
ENSCJAP00000006617	Surp	PF01805.20	1.7e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000006952	SFSWAP-202	3110	XM_017976509	ENSCJAP00000006586	907 (aa)	XP_017831998	F7DXR8
ENSCJAT00000006986	SFSWAP-201	3236	XM_009004911	ENSCJAP00000006617	949 (aa)	XP_009003159	F7HBA0
ENSCJAT00000006972	SFSWAP-203	3211	-	ENSCJAP00000006604	779 (aa)	XP_017831999	F7HBE3

Gene Model

Click here to download ENSCJAG00000003613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000003613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000003613	SFSWAP	100	97.059	ENSG00000061936	SFSWAP	100	97.059	Homo_sapiens
ENSCJAG00000003613	SFSWAP	74	60.519	ENSAPOG00000005784	sfswap	96	78.571	Acanthochromis_polyacanthus
ENSCJAG00000003613	SFSWAP	100	85.248	ENSAMEG00000013818	SFSWAP	100	86.091	Ailuropoda_melanoleuca
ENSCJAG00000003613	SFSWAP	73	59.621	ENSAOCG00000016469	sfswap	97	51.655	Amphiprion_ocellaris
ENSCJAG00000003613	SFSWAP	74	60.317	ENSAPEG00000004965	sfswap	97	51.964	Amphiprion_percula
ENSCJAG00000003613	SFSWAP	80	57.847	ENSATEG00000021053	sfswap	99	52.028	Anabas_testudineus
ENSCJAG00000003613	SFSWAP	100	77.638	ENSAPLG00000013808	SFSWAP	97	79.935	Anas_platyrhynchos
ENSCJAG00000003613	SFSWAP	99	72.949	ENSACAG00000007220	SFSWAP	100	73.326	Anolis_carolinensis
ENSCJAG00000003613	SFSWAP	100	98.105	ENSANAG00000001518	SFSWAP	100	98.105	Aotus_nancymaae
ENSCJAG00000003613	SFSWAP	77	58.723	ENSACLG00000020159	sfswap	97	52.690	Astatotilapia_calliptera
ENSCJAG00000003613	SFSWAP	100	90.174	ENSBTAG00000000439	SFSWAP	100	89.673	Bos_taurus
ENSCJAG00000003613	SFSWAP	100	88.303	ENSCAFG00000006625	SFSWAP	100	88.409	Canis_familiaris
ENSCJAG00000003613	SFSWAP	98	78.375	ENSCAFG00020011254	SFSWAP	99	79.804	Canis_lupus_dingo
ENSCJAG00000003613	SFSWAP	100	90.050	ENSCHIG00000008838	SFSWAP	100	89.779	Capra_hircus
ENSCJAG00000003613	SFSWAP	100	93.045	ENSTSYG00000010303	SFSWAP	100	93.256	Carlito_syrichta
ENSCJAG00000003613	SFSWAP	98	89.253	ENSCAPG00000004394	SFSWAP	96	90.080	Cavia_aperea
ENSCJAG00000003613	SFSWAP	100	90.727	ENSCPOG00000005280	SFSWAP	100	90.727	Cavia_porcellus
ENSCJAG00000003613	SFSWAP	100	97.682	ENSCCAG00000037255	SFSWAP	100	97.682	Cebus_capucinus
ENSCJAG00000003613	SFSWAP	100	97.260	ENSCATG00000031094	SFSWAP	100	97.260	Cercocebus_atys
ENSCJAG00000003613	SFSWAP	100	91.465	ENSCLAG00000008380	SFSWAP	100	91.675	Chinchilla_lanigera
ENSCJAG00000003613	SFSWAP	100	97.050	ENSCSAG00000001884	SFSWAP	100	97.050	Chlorocebus_sabaeus
ENSCJAG00000003613	SFSWAP	98	71.895	ENSCHOG00000003578	SFSWAP	100	74.858	Choloepus_hoffmanni
ENSCJAG00000003613	SFSWAP	100	74.334	ENSCPBG00000024757	SFSWAP	96	76.366	Chrysemys_picta_bellii
ENSCJAG00000003613	SFSWAP	100	96.944	ENSCANG00000036501	SFSWAP	100	96.944	Colobus_angolensis_palliatus
ENSCJAG00000003613	SFSWAP	100	87.671	ENSCGRG00001011284	Sfswap	100	88.514	Cricetulus_griseus_chok1gshd
ENSCJAG00000003613	SFSWAP	100	87.671	ENSCGRG00000017417	Sfswap	100	88.514	Cricetulus_griseus_crigri
ENSCJAG00000003613	SFSWAP	73	61.472	ENSCSEG00000003773	sfswap	97	53.194	Cynoglossus_semilaevis
ENSCJAG00000003613	SFSWAP	60	78.000	ENSCVAG00000001205	-	97	46.648	Cyprinodon_variegatus
ENSCJAG00000003613	SFSWAP	81	59.923	ENSDARG00000005980	sfswap	100	55.447	Danio_rerio
ENSCJAG00000003613	SFSWAP	100	88.184	ENSDNOG00000018742	SFSWAP	100	87.197	Dasypus_novemcinctus
ENSCJAG00000003613	SFSWAP	97	83.007	ENSDORG00000010352	Sfswap	99	83.007	Dipodomys_ordii
ENSCJAG00000003613	SFSWAP	53	46.610	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSCJAG00000003613	SFSWAP	88	72.051	ENSETEG00000016657	-	91	70.370	Echinops_telfairi
ENSCJAG00000003613	SFSWAP	97	38.176	ENSEBUG00000016748	SFSWAP	91	40.943	Eptatretus_burgeri
ENSCJAG00000003613	SFSWAP	100	90.050	ENSEASG00005016502	SFSWAP	100	89.989	Equus_asinus_asinus
ENSCJAG00000003613	SFSWAP	100	89.925	ENSECAG00000007657	SFSWAP	99	89.763	Equus_caballus
ENSCJAG00000003613	SFSWAP	98	71.166	ENSEEUG00000001713	SFSWAP	99	73.072	Erinaceus_europaeus
ENSCJAG00000003613	SFSWAP	100	52.099	ENSELUG00000010942	sfswap	100	50.282	Esox_lucius
ENSCJAG00000003613	SFSWAP	100	88.830	ENSFCAG00000010778	SFSWAP	100	88.830	Felis_catus
ENSCJAG00000003613	SFSWAP	100	77.459	ENSFALG00000009577	SFSWAP	96	79.482	Ficedula_albicollis
ENSCJAG00000003613	SFSWAP	100	90.651	ENSFDAG00000017235	SFSWAP	100	90.861	Fukomys_damarensis
ENSCJAG00000003613	SFSWAP	51	69.767	ENSGMOG00000009205	sfswap	76	70.432	Gadus_morhua
ENSCJAG00000003613	SFSWAP	97	78.433	ENSGALG00000002487	SFSWAP	97	79.377	Gallus_gallus
ENSCJAG00000003613	SFSWAP	78	58.960	ENSGAFG00000006272	sfswap	97	53.320	Gambusia_affinis
ENSCJAG00000003613	SFSWAP	75	70.588	ENSGACG00000017647	sfswap	99	54.487	Gasterosteus_aculeatus
ENSCJAG00000003613	SFSWAP	100	74.182	ENSGAGG00000002611	SFSWAP	96	77.182	Gopherus_agassizii
ENSCJAG00000003613	SFSWAP	100	97.164	ENSGGOG00000014877	SFSWAP	100	97.164	Gorilla_gorilla
ENSCJAG00000003613	SFSWAP	77	58.678	ENSHBUG00000005629	sfswap	97	50.506	Haplochromis_burtoni
ENSCJAG00000003613	SFSWAP	100	91.043	ENSHGLG00000019216	SFSWAP	100	91.149	Heterocephalus_glaber_female
ENSCJAG00000003613	SFSWAP	100	90.622	ENSHGLG00100019350	SFSWAP	100	90.727	Heterocephalus_glaber_male
ENSCJAG00000003613	SFSWAP	75	58.357	ENSHCOG00000009475	sfswap	97	51.527	Hippocampus_comes
ENSCJAG00000003613	SFSWAP	98	56.959	ENSIPUG00000010598	sfswap	98	56.588	Ictalurus_punctatus
ENSCJAG00000003613	SFSWAP	100	89.263	ENSSTOG00000000773	SFSWAP	100	90.421	Ictidomys_tridecemlineatus
ENSCJAG00000003613	SFSWAP	100	88.093	ENSJJAG00000006609	Sfswap	100	88.303	Jaculus_jaculus
ENSCJAG00000003613	SFSWAP	87	59.943	ENSKMAG00000013168	sfswap	88	59.065	Kryptolebias_marmoratus
ENSCJAG00000003613	SFSWAP	76	57.815	ENSLBEG00000010239	sfswap	74	59.605	Labrus_bergylta
ENSCJAG00000003613	SFSWAP	100	63.440	ENSLACG00000018678	SFSWAP	96	64.485	Latimeria_chalumnae
ENSCJAG00000003613	SFSWAP	99	57.952	ENSLOCG00000006202	sfswap	99	60.180	Lepisosteus_oculatus
ENSCJAG00000003613	SFSWAP	99	85.990	ENSLAFG00000014462	SFSWAP	100	89.078	Loxodonta_africana
ENSCJAG00000003613	SFSWAP	100	96.398	ENSMFAG00000037352	SFSWAP	95	96.646	Macaca_fascicularis
ENSCJAG00000003613	SFSWAP	100	96.944	ENSMMUG00000020343	SFSWAP	100	96.944	Macaca_mulatta
ENSCJAG00000003613	SFSWAP	100	96.944	ENSMNEG00000041002	SFSWAP	100	96.944	Macaca_nemestrina
ENSCJAG00000003613	SFSWAP	100	94.837	ENSMLEG00000035728	SFSWAP	100	94.942	Mandrillus_leucophaeus
ENSCJAG00000003613	SFSWAP	77	58.953	ENSMAMG00000006631	sfswap	97	53.713	Mastacembelus_armatus
ENSCJAG00000003613	SFSWAP	77	58.678	ENSMZEG00005017834	SFSWAP	96	52.111	Maylandia_zebra
ENSCJAG00000003613	SFSWAP	97	77.354	ENSMGAG00000002191	SFSWAP	92	78.344	Meleagris_gallopavo
ENSCJAG00000003613	SFSWAP	100	92.526	ENSMICG00000004465	SFSWAP	100	93.158	Microcebus_murinus
ENSCJAG00000003613	SFSWAP	100	87.460	ENSMOCG00000014390	Sfswap	100	88.303	Microtus_ochrogaster
ENSCJAG00000003613	SFSWAP	98	78.096	ENSMODG00000015581	SFSWAP	99	73.264	Monodelphis_domestica
ENSCJAG00000003613	SFSWAP	75	60.714	ENSMALG00000012603	sfswap	97	53.738	Monopterus_albus
ENSCJAG00000003613	SFSWAP	100	87.671	MGP_CAROLIEiJ_G0027780	Sfswap	100	88.514	Mus_caroli
ENSCJAG00000003613	SFSWAP	100	87.566	ENSMUSG00000029439	Sfswap	100	88.409	Mus_musculus
ENSCJAG00000003613	SFSWAP	100	87.290	MGP_PahariEiJ_G0024360	Sfswap	100	88.130	Mus_pahari
ENSCJAG00000003613	SFSWAP	100	87.566	MGP_SPRETEiJ_G0028779	Sfswap	100	88.409	Mus_spretus
ENSCJAG00000003613	SFSWAP	100	88.093	ENSMPUG00000002218	SFSWAP	100	88.198	Mustela_putorius_furo
ENSCJAG00000003613	SFSWAP	89	87.173	ENSMLUG00000011296	SFSWAP	100	80.645	Myotis_lucifugus
ENSCJAG00000003613	SFSWAP	100	88.409	ENSNGAG00000018167	Sfswap	100	89.357	Nannospalax_galili
ENSCJAG00000003613	SFSWAP	71	58.395	ENSNBRG00000020857	sfswap	99	51.684	Neolamprologus_brichardi
ENSCJAG00000003613	SFSWAP	100	95.776	ENSNLEG00000008386	SFSWAP	100	94.947	Nomascus_leucogenys
ENSCJAG00000003613	SFSWAP	71	87.319	ENSMEUG00000009556	-	80	87.319	Notamacropus_eugenii
ENSCJAG00000003613	SFSWAP	100	73.634	ENSOPRG00000006983	-	100	74.475	Ochotona_princeps
ENSCJAG00000003613	SFSWAP	100	89.673	ENSODEG00000008020	SFSWAP	100	90.516	Octodon_degus
ENSCJAG00000003613	SFSWAP	94	62.188	ENSONIG00000003757	sfswap	94	59.536	Oreochromis_niloticus
ENSCJAG00000003613	SFSWAP	63	80.368	ENSOANG00000013861	SFSWAP	100	84.187	Ornithorhynchus_anatinus
ENSCJAG00000003613	SFSWAP	100	86.880	ENSOCUG00000002165	SFSWAP	100	87.603	Oryctolagus_cuniculus
ENSCJAG00000003613	SFSWAP	76	58.333	ENSORLG00000010983	sfswap	97	51.844	Oryzias_latipes
ENSCJAG00000003613	SFSWAP	76	58.333	ENSORLG00020010779	sfswap	97	50.259	Oryzias_latipes_hni
ENSCJAG00000003613	SFSWAP	80	56.574	ENSORLG00015023093	sfswap	99	50.200	Oryzias_latipes_hsok
ENSCJAG00000003613	SFSWAP	76	58.766	ENSOMEG00000022065	sfswap	97	51.905	Oryzias_melastigma
ENSCJAG00000003613	SFSWAP	89	92.335	ENSOGAG00000016724	SFSWAP	99	92.571	Otolemur_garnettii
ENSCJAG00000003613	SFSWAP	100	89.677	ENSOARG00000014314	SFSWAP	100	89.380	Ovis_aries
ENSCJAG00000003613	SFSWAP	100	97.059	ENSPPAG00000036706	SFSWAP	100	97.059	Pan_paniscus
ENSCJAG00000003613	SFSWAP	100	84.739	ENSPPRG00000017318	SFSWAP	100	84.739	Panthera_pardus
ENSCJAG00000003613	SFSWAP	99	77.005	ENSPTIG00000004304	SFSWAP	97	89.474	Panthera_tigris_altaica
ENSCJAG00000003613	SFSWAP	100	96.744	ENSPTRG00000005640	SFSWAP	100	96.744	Pan_troglodytes
ENSCJAG00000003613	SFSWAP	100	97.260	ENSPANG00000019737	SFSWAP	100	97.260	Papio_anubis
ENSCJAG00000003613	SFSWAP	77	61.304	ENSPKIG00000008327	sfswap	100	56.065	Paramormyrops_kingsleyae
ENSCJAG00000003613	SFSWAP	74	62.579	ENSPSIG00000017807	SFSWAP	92	77.117	Pelodiscus_sinensis
ENSCJAG00000003613	SFSWAP	100	86.842	ENSPEMG00000001237	Sfswap	100	87.684	Peromyscus_maniculatus_bairdii
ENSCJAG00000003613	SFSWAP	51	57.974	ENSPMAG00000008279	sfswap	99	54.329	Petromyzon_marinus
ENSCJAG00000003613	SFSWAP	99	78.624	ENSPCIG00000006062	SFSWAP	99	77.915	Phascolarctos_cinereus
ENSCJAG00000003613	SFSWAP	99	51.269	ENSPFOG00000019657	sfswap	99	51.748	Poecilia_formosa
ENSCJAG00000003613	SFSWAP	78	58.687	ENSPLAG00000008513	sfswap	99	51.848	Poecilia_latipinna
ENSCJAG00000003613	SFSWAP	78	58.550	ENSPMEG00000008716	sfswap	99	51.852	Poecilia_mexicana
ENSCJAG00000003613	SFSWAP	78	58.140	ENSPREG00000006692	sfswap	99	51.800	Poecilia_reticulata
ENSCJAG00000003613	SFSWAP	98	96.574	ENSPPYG00000005129	SFSWAP	100	96.574	Pongo_abelii
ENSCJAG00000003613	SFSWAP	58	87.500	ENSPCAG00000004977	-	65	87.500	Procavia_capensis
ENSCJAG00000003613	SFSWAP	100	91.925	ENSPCOG00000023786	SFSWAP	100	93.361	Propithecus_coquereli
ENSCJAG00000003613	SFSWAP	92	89.199	ENSPVAG00000014918	SFSWAP	92	89.199	Pteropus_vampyrus
ENSCJAG00000003613	SFSWAP	77	57.989	ENSPNYG00000012660	sfswap	83	59.195	Pundamilia_nyererei
ENSCJAG00000003613	SFSWAP	80	58.127	ENSPNAG00000007073	sfswap	98	51.769	Pygocentrus_nattereri
ENSCJAG00000003613	SFSWAP	100	87.065	ENSRNOG00000000931	Sfswap	100	86.617	Rattus_norvegicus
ENSCJAG00000003613	SFSWAP	100	90.516	ENSRBIG00000036330	SFSWAP	100	90.516	Rhinopithecus_bieti
ENSCJAG00000003613	SFSWAP	100	96.733	ENSRROG00000032001	SFSWAP	100	96.733	Rhinopithecus_roxellana
ENSCJAG00000003613	SFSWAP	100	97.050	ENSSBOG00000026217	SFSWAP	100	97.050	Saimiri_boliviensis_boliviensis
ENSCJAG00000003613	SFSWAP	98	81.453	ENSSHAG00000014232	SFSWAP	100	83.521	Sarcophilus_harrisii
ENSCJAG00000003613	SFSWAP	96	56.386	ENSSFOG00015000766	sfswap	97	58.290	Scleropages_formosus
ENSCJAG00000003613	SFSWAP	74	59.659	ENSSMAG00000018718	sfswap	97	52.096	Scophthalmus_maximus
ENSCJAG00000003613	SFSWAP	87	61.263	ENSSDUG00000021680	sfswap	97	50.554	Seriola_dumerili
ENSCJAG00000003613	SFSWAP	84	61.836	ENSSLDG00000010835	sfswap	86	60.057	Seriola_lalandi_dorsalis
ENSCJAG00000003613	SFSWAP	82	87.227	ENSSARG00000000424	SFSWAP	85	87.227	Sorex_araneus
ENSCJAG00000003613	SFSWAP	99	74.775	ENSSPUG00000010272	SFSWAP	99	74.939	Sphenodon_punctatus
ENSCJAG00000003613	SFSWAP	76	60.396	ENSSPAG00000014310	sfswap	97	51.584	Stegastes_partitus
ENSCJAG00000003613	SFSWAP	100	89.485	ENSSSCG00000009744	SFSWAP	100	89.590	Sus_scrofa
ENSCJAG00000003613	SFSWAP	97	79.135	ENSTGUG00000004623	SFSWAP	99	79.415	Taeniopygia_guttata
ENSCJAG00000003613	SFSWAP	54	93.750	ENSTBEG00000004983	-	67	93.750	Tupaia_belangeri
ENSCJAG00000003613	SFSWAP	100	79.832	ENSTTRG00000013478	SFSWAP	100	79.832	Tursiops_truncatus
ENSCJAG00000003613	SFSWAP	100	85.880	ENSUAMG00000016807	SFSWAP	100	85.985	Ursus_americanus
ENSCJAG00000003613	SFSWAP	90	81.637	ENSUMAG00000002957	SFSWAP	91	83.654	Ursus_maritimus
ENSCJAG00000003613	SFSWAP	59	94.574	ENSVPAG00000010479	-	74	94.309	Vicugna_pacos
ENSCJAG00000003613	SFSWAP	100	88.303	ENSVVUG00000010753	SFSWAP	100	88.409	Vulpes_vulpes
ENSCJAG00000003613	SFSWAP	96	64.578	ENSXETG00000009350	sfswap	92	65.730	Xenopus_tropicalis
ENSCJAG00000003613	SFSWAP	74	60.029	ENSXMAG00000009020	sfswap	97	53.112	Xiphophorus_maculatus