EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000003676 (Gene tree)
Gene ID: 100414869
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 15847 bases
Position: chrNTIC01038832.1:15474797-15490643
Accession: 5276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000006702	RRM_1	PF00076.22	1e-16	1	2
ENSCJAP00000006702	RRM_1	PF00076.22	1e-16	2	2
ENSCJAP00000060455	RRM_1	PF00076.22	1e-16	1	2
ENSCJAP00000060455	RRM_1	PF00076.22	1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000007076	HTATSF1-202	4107	-	ENSCJAP00000006702	744 (aa)	-	F7F3L6
ENSCJAT00000077324	HTATSF1-201	4351	-	ENSCJAP00000060455	744 (aa)	-	F7F3L6

Gene Model

Click here to download ENSCJAG00000003676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000003676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000003676	HTATSF1	99	91.055	ENSG00000102241	HTATSF1	100	95.102	Homo_sapiens
ENSCJAG00000003676	HTATSF1	55	60.520	ENSAPOG00000009823	htatsf1	92	60.047	Acanthochromis_polyacanthus
ENSCJAG00000003676	HTATSF1	99	78.340	ENSAMEG00000002921	HTATSF1	99	79.328	Ailuropoda_melanoleuca
ENSCJAG00000003676	HTATSF1	50	62.016	ENSAOCG00000020994	htatsf1	92	58.237	Amphiprion_ocellaris
ENSCJAG00000003676	HTATSF1	50	62.016	ENSAPEG00000016432	htatsf1	88	59.902	Amphiprion_percula
ENSCJAG00000003676	HTATSF1	52	61.314	ENSATEG00000008903	htatsf1	82	62.400	Anabas_testudineus
ENSCJAG00000003676	HTATSF1	94	90.688	ENSANAG00000025458	-	100	90.115	Aotus_nancymaae
ENSCJAG00000003676	HTATSF1	95	83.239	ENSANAG00000027986	-	97	82.958	Aotus_nancymaae
ENSCJAG00000003676	HTATSF1	54	60.187	ENSACLG00000008096	htatsf1	81	62.366	Astatotilapia_calliptera
ENSCJAG00000003676	HTATSF1	50	62.563	ENSAMXG00000008387	htatsf1	78	63.587	Astyanax_mexicanus
ENSCJAG00000003676	HTATSF1	99	78.023	ENSBTAG00000054942	HTATSF1	99	78.784	Bos_taurus
ENSCJAG00000003676	HTATSF1	99	74.332	ENSBTAG00000032711	HTATSF1	99	76.903	Bos_taurus
ENSCJAG00000003676	HTATSF1	99	78.023	ENSBTAG00000055212	HTATSF1	99	78.784	Bos_taurus
ENSCJAG00000003676	HTATSF1	99	79.814	ENSCAFG00000023294	HTATSF1	99	80.423	Canis_familiaris
ENSCJAG00000003676	HTATSF1	99	78.470	ENSCAFG00020024635	HTATSF1	99	79.070	Canis_lupus_dingo
ENSCJAG00000003676	HTATSF1	99	79.361	ENSCHIG00000000312	HTATSF1	99	80.132	Capra_hircus
ENSCJAG00000003676	HTATSF1	99	83.910	ENSTSYG00000028876	HTATSF1	99	83.995	Carlito_syrichta
ENSCJAG00000003676	HTATSF1	99	89.623	ENSCCAG00000025329	-	99	89.623	Cebus_capucinus
ENSCJAG00000003676	HTATSF1	100	95.565	ENSCCAG00000022701	-	100	95.565	Cebus_capucinus
ENSCJAG00000003676	HTATSF1	99	91.031	ENSCATG00000029963	HTATSF1	99	91.501	Cercocebus_atys
ENSCJAG00000003676	HTATSF1	99	73.001	ENSCLAG00000002718	HTATSF1	99	74.770	Chinchilla_lanigera
ENSCJAG00000003676	HTATSF1	99	91.165	ENSCSAG00000007505	HTATSF1	99	91.633	Chlorocebus_sabaeus
ENSCJAG00000003676	HTATSF1	99	91.165	ENSCANG00000028495	HTATSF1	99	91.633	Colobus_angolensis_palliatus
ENSCJAG00000003676	HTATSF1	81	75.517	ENSCGRG00001021602	Htatsf1	99	72.739	Cricetulus_griseus_chok1gshd
ENSCJAG00000003676	HTATSF1	73	68.728	ENSCGRG00000002085	Htatsf1	99	67.036	Cricetulus_griseus_crigri
ENSCJAG00000003676	HTATSF1	99	77.023	ENSDNOG00000002254	HTATSF1	99	79.608	Dasypus_novemcinctus
ENSCJAG00000003676	HTATSF1	99	40.897	ENSETEG00000006377	-	100	41.851	Echinops_telfairi
ENSCJAG00000003676	HTATSF1	50	51.621	ENSEBUG00000001534	htatsf1	76	50.653	Eptatretus_burgeri
ENSCJAG00000003676	HTATSF1	99	77.503	ENSEASG00005003440	HTATSF1	99	78.784	Equus_asinus_asinus
ENSCJAG00000003676	HTATSF1	99	77.503	ENSECAG00000009156	HTATSF1	99	78.784	Equus_caballus
ENSCJAG00000003676	HTATSF1	99	66.184	ENSEEUG00000010668	HTATSF1	99	66.928	Erinaceus_europaeus
ENSCJAG00000003676	HTATSF1	99	80.556	ENSFCAG00000031924	HTATSF1	99	81.085	Felis_catus
ENSCJAG00000003676	HTATSF1	51	68.912	ENSFALG00000003728	HTATSF1	87	68.434	Ficedula_albicollis
ENSCJAG00000003676	HTATSF1	99	73.844	ENSFDAG00000008617	HTATSF1	99	75.591	Fukomys_damarensis
ENSCJAG00000003676	HTATSF1	50	64.467	ENSFHEG00000020286	htatsf1	81	64.946	Fundulus_heteroclitus
ENSCJAG00000003676	HTATSF1	50	69.271	ENSGALG00000006410	HTATSF1	87	67.839	Gallus_gallus
ENSCJAG00000003676	HTATSF1	99	91.055	ENSGGOG00000026072	HTATSF1	99	91.368	Gorilla_gorilla
ENSCJAG00000003676	HTATSF1	54	59.859	ENSHBUG00000004392	htatsf1	81	61.995	Haplochromis_burtoni
ENSCJAG00000003676	HTATSF1	98	75.904	ENSHGLG00000005328	HTATSF1	99	77.015	Heterocephalus_glaber_female
ENSCJAG00000003676	HTATSF1	50	62.694	ENSHCOG00000009056	htatsf1	93	60.096	Hippocampus_comes
ENSCJAG00000003676	HTATSF1	99	78.600	ENSSTOG00000012505	HTATSF1	99	80.723	Ictidomys_tridecemlineatus
ENSCJAG00000003676	HTATSF1	54	42.891	ENSLOCG00000015118	htatsf1	88	42.446	Lepisosteus_oculatus
ENSCJAG00000003676	HTATSF1	99	70.385	ENSLAFG00000014307	HTATSF1	99	70.542	Loxodonta_africana
ENSCJAG00000003676	HTATSF1	99	90.897	ENSMFAG00000044705	HTATSF1	99	91.368	Macaca_fascicularis
ENSCJAG00000003676	HTATSF1	99	90.897	ENSMMUG00000006450	HTATSF1	99	91.368	Macaca_mulatta
ENSCJAG00000003676	HTATSF1	99	85.230	ENSMNEG00000024084	HTATSF1	99	83.871	Macaca_nemestrina
ENSCJAG00000003676	HTATSF1	99	90.763	ENSMLEG00000035511	HTATSF1	99	91.235	Mandrillus_leucophaeus
ENSCJAG00000003676	HTATSF1	50	63.731	ENSMAMG00000021225	htatsf1	81	64.402	Mastacembelus_armatus
ENSCJAG00000003676	HTATSF1	54	59.859	ENSMZEG00005000485	htatsf1	81	61.995	Maylandia_zebra
ENSCJAG00000003676	HTATSF1	99	72.346	ENSMAUG00000007235	Htatsf1	99	73.263	Mesocricetus_auratus
ENSCJAG00000003676	HTATSF1	99	82.540	ENSMICG00000009348	HTATSF1	99	83.730	Microcebus_murinus
ENSCJAG00000003676	HTATSF1	99	69.973	ENSMOCG00000022370	-	95	70.400	Microtus_ochrogaster
ENSCJAG00000003676	HTATSF1	99	71.855	ENSMOCG00000023007	-	99	72.715	Microtus_ochrogaster
ENSCJAG00000003676	HTATSF1	53	68.939	ENSMODG00000014087	-	87	68.939	Monodelphis_domestica
ENSCJAG00000003676	HTATSF1	54	58.353	ENSMALG00000019977	htatsf1	93	58.353	Monopterus_albus
ENSCJAG00000003676	HTATSF1	99	72.368	MGP_CAROLIEiJ_G0033094	Htatsf1	99	73.026	Mus_caroli
ENSCJAG00000003676	HTATSF1	97	74.592	ENSMUSG00000067873	Htatsf1	99	74.605	Mus_musculus
ENSCJAG00000003676	HTATSF1	97	74.457	MGP_SPRETEiJ_G0034249	Htatsf1	99	74.474	Mus_spretus
ENSCJAG00000003676	HTATSF1	99	76.873	ENSMPUG00000001901	HTATSF1	99	78.682	Mustela_putorius_furo
ENSCJAG00000003676	HTATSF1	99	71.640	ENSMLUG00000009234	-	99	71.713	Myotis_lucifugus
ENSCJAG00000003676	HTATSF1	99	74.868	ENSMLUG00000028418	-	99	74.901	Myotis_lucifugus
ENSCJAG00000003676	HTATSF1	97	76.349	ENSNGAG00000017831	Htatsf1	99	76.841	Nannospalax_galili
ENSCJAG00000003676	HTATSF1	99	90.921	ENSNLEG00000002746	HTATSF1	99	91.235	Nomascus_leucogenys
ENSCJAG00000003676	HTATSF1	53	69.521	ENSMEUG00000004133	-	95	69.270	Notamacropus_eugenii
ENSCJAG00000003676	HTATSF1	56	65.394	ENSOANG00000011674	-	99	65.394	Ornithorhynchus_anatinus
ENSCJAG00000003676	HTATSF1	99	79.763	ENSOCUG00000012570	HTATSF1	99	80.789	Oryctolagus_cuniculus
ENSCJAG00000003676	HTATSF1	98	78.849	ENSOGAG00000005565	HTATSF1	99	80.632	Otolemur_garnettii
ENSCJAG00000003676	HTATSF1	99	73.377	ENSOARG00000000481	-	99	73.930	Ovis_aries
ENSCJAG00000003676	HTATSF1	99	77.633	ENSOARG00000011215	-	99	78.396	Ovis_aries
ENSCJAG00000003676	HTATSF1	99	91.188	ENSPPAG00000024268	HTATSF1	99	91.501	Pan_paniscus
ENSCJAG00000003676	HTATSF1	99	80.556	ENSPPRG00000014209	HTATSF1	99	81.085	Panthera_pardus
ENSCJAG00000003676	HTATSF1	92	80.029	ENSPTIG00000016887	HTATSF1	95	80.599	Panthera_tigris_altaica
ENSCJAG00000003676	HTATSF1	99	91.188	ENSPTRG00000044591	HTATSF1	99	91.501	Pan_troglodytes
ENSCJAG00000003676	HTATSF1	99	74.163	ENSPANG00000010946	HTATSF1	99	74.502	Papio_anubis
ENSCJAG00000003676	HTATSF1	97	74.494	ENSPEMG00000022397	Htatsf1	99	74.248	Peromyscus_maniculatus_bairdii
ENSCJAG00000003676	HTATSF1	56	65.632	ENSPCIG00000030173	-	95	65.632	Phascolarctos_cinereus
ENSCJAG00000003676	HTATSF1	55	64.234	ENSPCIG00000018896	-	92	64.234	Phascolarctos_cinereus
ENSCJAG00000003676	HTATSF1	50	64.433	ENSPFOG00000007871	htatsf1	78	63.859	Poecilia_formosa
ENSCJAG00000003676	HTATSF1	50	64.083	ENSPLAG00000007532	htatsf1	81	63.315	Poecilia_latipinna
ENSCJAG00000003676	HTATSF1	50	64.691	ENSPMEG00000000352	htatsf1	81	64.130	Poecilia_mexicana
ENSCJAG00000003676	HTATSF1	50	64.175	ENSPREG00000007811	htatsf1	81	63.587	Poecilia_reticulata
ENSCJAG00000003676	HTATSF1	88	88.253	ENSPPYG00000020765	HTATSF1	88	88.253	Pongo_abelii
ENSCJAG00000003676	HTATSF1	93	70.247	ENSPCAG00000010576	HTATSF1	99	67.833	Procavia_capensis
ENSCJAG00000003676	HTATSF1	100	84.676	ENSPCOG00000021823	HTATSF1	100	85.073	Propithecus_coquereli
ENSCJAG00000003676	HTATSF1	99	73.486	ENSPVAG00000010281	HTATSF1	99	73.628	Pteropus_vampyrus
ENSCJAG00000003676	HTATSF1	54	59.859	ENSPNYG00000016693	htatsf1	81	61.995	Pundamilia_nyererei
ENSCJAG00000003676	HTATSF1	50	61.614	ENSPNAG00000006166	htatsf1	78	65.242	Pygocentrus_nattereri
ENSCJAG00000003676	HTATSF1	99	72.015	ENSRNOG00000027761	Htatsf1	99	72.657	Rattus_norvegicus
ENSCJAG00000003676	HTATSF1	99	80.187	ENSRBIG00000035486	HTATSF1	99	80.212	Rhinopithecus_bieti
ENSCJAG00000003676	HTATSF1	99	90.763	ENSRROG00000021939	HTATSF1	99	91.235	Rhinopithecus_roxellana
ENSCJAG00000003676	HTATSF1	99	89.262	ENSSBOG00000017914	-	99	89.262	Saimiri_boliviensis_boliviensis
ENSCJAG00000003676	HTATSF1	99	93.894	ENSSBOG00000027186	-	99	94.886	Saimiri_boliviensis_boliviensis
ENSCJAG00000003676	HTATSF1	51	69.816	ENSSHAG00000006440	-	97	69.816	Sarcophilus_harrisii
ENSCJAG00000003676	HTATSF1	54	66.423	ENSSHAG00000018908	-	90	66.423	Sarcophilus_harrisii
ENSCJAG00000003676	HTATSF1	50	63.733	ENSSFOG00015012002	htatsf1	80	63.733	Scleropages_formosus
ENSCJAG00000003676	HTATSF1	54	59.294	ENSSLDG00000016880	htatsf1	93	59.294	Seriola_lalandi_dorsalis
ENSCJAG00000003676	HTATSF1	98	65.188	ENSSARG00000005193	HTATSF1	97	65.726	Sorex_araneus
ENSCJAG00000003676	HTATSF1	51	67.876	ENSSPUG00000014767	HTATSF1	84	67.876	Sphenodon_punctatus
ENSCJAG00000003676	HTATSF1	99	73.056	ENSSSCG00000023062	HTATSF1	99	73.901	Sus_scrofa
ENSCJAG00000003676	HTATSF1	50	68.750	ENSTGUG00000002099	HTATSF1	87	67.839	Taeniopygia_guttata
ENSCJAG00000003676	HTATSF1	85	71.919	ENSTTRG00000002269	HTATSF1	99	73.323	Tursiops_truncatus
ENSCJAG00000003676	HTATSF1	99	80.449	ENSUAMG00000012048	HTATSF1	99	80.978	Ursus_americanus
ENSCJAG00000003676	HTATSF1	99	78.682	ENSUMAG00000010393	HTATSF1	99	79.587	Ursus_maritimus
ENSCJAG00000003676	HTATSF1	91	75.977	ENSVPAG00000004569	HTATSF1	99	75.827	Vicugna_pacos
ENSCJAG00000003676	HTATSF1	99	78.470	ENSVVUG00000024802	HTATSF1	99	79.070	Vulpes_vulpes
ENSCJAG00000003676	HTATSF1	50	65.684	ENSXCOG00000006912	htatsf1	81	65.156	Xiphophorus_couchianus
ENSCJAG00000003676	HTATSF1	50	66.667	ENSXMAG00000000490	htatsf1	81	66.201	Xiphophorus_maculatus