EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000004054 (Gene tree)
Gene ID: 100403304
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 25766 bases
Position: chrNTIC01038833.1:106131940-106157705
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000007357	GEMIN8	PF15348.6	7.6e-77	1	1
ENSCJAP00000053993	GEMIN8	PF15348.6	7.6e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000007774	-	912	-	ENSCJAP00000007357	204 (aa)	-	F6RJU5
ENSCJAT00000074973	-	995	-	ENSCJAP00000053993	204 (aa)	-	F6RJU5

Gene Model

Click here to download ENSCJAG00000004054's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000004054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000004054	-	99	90.099	ENSCJAG00000023001	-	83	90.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000004054	-	99	81.683	ENSG00000046647	GEMIN8	100	82.682	Homo_sapiens
ENSCJAG00000004054	-	95	40.513	ENSAPOG00000006835	gemin8	77	41.538	Acanthochromis_polyacanthus
ENSCJAG00000004054	-	97	61.929	ENSAMEG00000015945	GEMIN8	82	61.929	Ailuropoda_melanoleuca
ENSCJAG00000004054	-	91	41.753	ENSACIG00000006732	gemin8	74	41.711	Amphilophus_citrinellus
ENSCJAG00000004054	-	95	39.487	ENSAOCG00000011833	gemin8	72	37.949	Amphiprion_ocellaris
ENSCJAG00000004054	-	95	41.026	ENSAPEG00000015680	gemin8	72	39.487	Amphiprion_percula
ENSCJAG00000004054	-	95	41.538	ENSATEG00000018220	gemin8	74	41.270	Anabas_testudineus
ENSCJAG00000004054	-	95	42.132	ENSACAG00000001988	GEMIN8	80	42.132	Anolis_carolinensis
ENSCJAG00000004054	-	99	88.614	ENSANAG00000037448	GEMIN8	83	88.614	Aotus_nancymaae
ENSCJAG00000004054	-	99	49.510	ENSBTAG00000010289	GEMIN8	82	50.246	Bos_taurus
ENSCJAG00000004054	-	98	62.000	ENSCAFG00000028737	GEMIN8	81	61.000	Canis_familiaris
ENSCJAG00000004054	-	98	62.000	ENSCAFG00020003054	GEMIN8	81	61.000	Canis_lupus_dingo
ENSCJAG00000004054	-	99	51.961	ENSCHIG00000009439	GEMIN8	82	51.724	Capra_hircus
ENSCJAG00000004054	-	92	76.064	ENSTSYG00000028251	GEMIN8	82	75.000	Carlito_syrichta
ENSCJAG00000004054	-	97	61.929	ENSCAPG00000005495	GEMIN8	82	61.929	Cavia_aperea
ENSCJAG00000004054	-	98	62.000	ENSCPOG00000005933	GEMIN8	72	62.000	Cavia_porcellus
ENSCJAG00000004054	-	99	82.178	ENSCCAG00000029140	-	74	84.653	Cebus_capucinus
ENSCJAG00000004054	-	99	82.178	ENSCATG00000042167	GEMIN8	83	82.178	Cercocebus_atys
ENSCJAG00000004054	-	98	64.500	ENSCLAG00000001838	GEMIN8	82	64.500	Chinchilla_lanigera
ENSCJAG00000004054	-	81	81.325	ENSCSAG00000015017	-	91	82.895	Chlorocebus_sabaeus
ENSCJAG00000004054	-	99	82.178	ENSCSAG00000019423	-	83	82.178	Chlorocebus_sabaeus
ENSCJAG00000004054	-	92	47.872	ENSCPBG00000015720	GEMIN8	77	47.872	Chrysemys_picta_bellii
ENSCJAG00000004054	-	99	61.386	ENSCANG00000033229	-	80	61.386	Colobus_angolensis_palliatus
ENSCJAG00000004054	-	99	82.673	ENSCANG00000031301	GEMIN8	83	82.673	Colobus_angolensis_palliatus
ENSCJAG00000004054	-	97	59.898	ENSCGRG00001012561	Gemin8	82	60.406	Cricetulus_griseus_chok1gshd
ENSCJAG00000004054	-	97	59.898	ENSCGRG00000012265	Gemin8	82	60.406	Cricetulus_griseus_crigri
ENSCJAG00000004054	-	94	41.451	ENSCSEG00000005280	gemin8	76	38.860	Cynoglossus_semilaevis
ENSCJAG00000004054	-	95	41.538	ENSCVAG00000002926	gemin8	76	41.026	Cyprinodon_variegatus
ENSCJAG00000004054	-	92	39.683	ENSDARG00000053496	gemin8	76	38.624	Danio_rerio
ENSCJAG00000004054	-	97	65.152	ENSDNOG00000047905	GEMIN8	81	65.152	Dasypus_novemcinctus
ENSCJAG00000004054	-	60	61.789	ENSDORG00000013897	-	93	59.483	Dipodomys_ordii
ENSCJAG00000004054	-	98	49.500	ENSETEG00000010181	-	60	49.500	Echinops_telfairi
ENSCJAG00000004054	-	100	56.132	ENSEASG00005016608	-	76	56.132	Equus_asinus_asinus
ENSCJAG00000004054	-	98	66.500	ENSECAG00000010665	GEMIN8	82	67.822	Equus_caballus
ENSCJAG00000004054	-	94	45.312	ENSEEUG00000015199	-	54	43.750	Erinaceus_europaeus
ENSCJAG00000004054	-	89	40.437	ENSELUG00000021226	gemin8	73	39.891	Esox_lucius
ENSCJAG00000004054	-	98	60.500	ENSFCAG00000014428	GEMIN8	82	58.500	Felis_catus
ENSCJAG00000004054	-	95	46.411	ENSFALG00000004451	GEMIN8	82	46.269	Ficedula_albicollis
ENSCJAG00000004054	-	97	65.657	ENSFDAG00000007127	GEMIN8	82	65.657	Fukomys_damarensis
ENSCJAG00000004054	-	95	41.026	ENSFHEG00000018785	gemin8	78	37.436	Fundulus_heteroclitus
ENSCJAG00000004054	-	89	37.566	ENSGMOG00000016911	gemin8	75	37.363	Gadus_morhua
ENSCJAG00000004054	-	95	49.246	ENSGALG00000016574	GEMIN8	77	50.000	Gallus_gallus
ENSCJAG00000004054	-	94	37.824	ENSGAFG00000018921	gemin8	75	43.523	Gambusia_affinis
ENSCJAG00000004054	-	97	35.176	ENSGACG00000014592	gemin8	78	38.384	Gasterosteus_aculeatus
ENSCJAG00000004054	-	94	46.597	ENSGAGG00000005312	GEMIN8	79	46.597	Gopherus_agassizii
ENSCJAG00000004054	-	99	82.673	ENSGGOG00000025262	GEMIN8	83	82.673	Gorilla_gorilla
ENSCJAG00000004054	-	95	39.487	ENSHBUG00000012537	gemin8	67	40.000	Haplochromis_burtoni
ENSCJAG00000004054	-	95	39.487	ENSHBUG00000012214	GEMIN8	82	40.513	Haplochromis_burtoni
ENSCJAG00000004054	-	97	66.667	ENSHGLG00000001816	GEMIN8	81	66.667	Heterocephalus_glaber_female
ENSCJAG00000004054	-	97	66.667	ENSHGLG00100019025	GEMIN8	81	66.667	Heterocephalus_glaber_male
ENSCJAG00000004054	-	95	41.538	ENSHCOG00000005986	gemin8	76	40.513	Hippocampus_comes
ENSCJAG00000004054	-	94	42.268	ENSIPUG00000013983	gemin8	77	44.330	Ictalurus_punctatus
ENSCJAG00000004054	-	98	72.000	ENSSTOG00000003330	GEMIN8	82	72.000	Ictidomys_tridecemlineatus
ENSCJAG00000004054	-	95	64.433	ENSJJAG00000011347	Gemin8	80	65.464	Jaculus_jaculus
ENSCJAG00000004054	-	93	46.193	ENSLACG00000011839	GEMIN8	77	46.193	Latimeria_chalumnae
ENSCJAG00000004054	-	96	42.714	ENSLOCG00000010057	gemin8	79	42.714	Lepisosteus_oculatus
ENSCJAG00000004054	-	97	69.543	ENSLAFG00000001835	GEMIN8	82	70.051	Loxodonta_africana
ENSCJAG00000004054	-	93	64.550	ENSMFAG00000035850	-	78	62.434	Macaca_fascicularis
ENSCJAG00000004054	-	99	82.673	ENSMFAG00000000059	GEMIN8	83	82.673	Macaca_fascicularis
ENSCJAG00000004054	-	90	65.027	ENSMMUG00000045828	-	75	62.842	Macaca_mulatta
ENSCJAG00000004054	-	99	82.673	ENSMMUG00000013595	GEMIN8	83	82.673	Macaca_mulatta
ENSCJAG00000004054	-	99	82.673	ENSMNEG00000034497	GEMIN8	83	82.673	Macaca_nemestrina
ENSCJAG00000004054	-	99	82.178	ENSMLEG00000027629	GEMIN8	83	82.178	Mandrillus_leucophaeus
ENSCJAG00000004054	-	93	67.196	ENSMLEG00000036890	-	79	65.079	Mandrillus_leucophaeus
ENSCJAG00000004054	-	92	40.741	ENSMAMG00000021990	gemin8	75	40.741	Mastacembelus_armatus
ENSCJAG00000004054	-	95	39.487	ENSMZEG00005021141	gemin8	73	41.885	Maylandia_zebra
ENSCJAG00000004054	-	90	38.919	ENSMZEG00005021415	-	71	37.838	Maylandia_zebra
ENSCJAG00000004054	-	75	56.494	ENSMAUG00000014430	-	95	55.102	Mesocricetus_auratus
ENSCJAG00000004054	-	99	74.752	ENSMICG00000015984	GEMIN8	83	74.752	Microcebus_murinus
ENSCJAG00000004054	-	97	58.883	ENSMOCG00000008859	Gemin8	82	59.391	Microtus_ochrogaster
ENSCJAG00000004054	-	95	38.265	ENSMMOG00000012371	gemin8	75	38.947	Mola_mola
ENSCJAG00000004054	-	94	53.403	ENSMODG00000017297	GEMIN8	79	51.832	Monodelphis_domestica
ENSCJAG00000004054	-	90	43.243	ENSMALG00000015898	gemin8	68	44.865	Monopterus_albus
ENSCJAG00000004054	-	97	57.360	MGP_CAROLIEiJ_G0033569	Gemin8	99	58.289	Mus_caroli
ENSCJAG00000004054	-	97	58.883	ENSMUSG00000040621	Gemin8	99	59.893	Mus_musculus
ENSCJAG00000004054	-	97	59.391	MGP_PahariEiJ_G0032108	Gemin8	99	60.428	Mus_pahari
ENSCJAG00000004054	-	97	59.391	MGP_SPRETEiJ_G0034739	Gemin8	99	60.428	Mus_spretus
ENSCJAG00000004054	-	97	59.596	ENSMPUG00000002595	GEMIN8	82	57.286	Mustela_putorius_furo
ENSCJAG00000004054	-	99	62.687	ENSMLUG00000029217	-	82	60.199	Myotis_lucifugus
ENSCJAG00000004054	-	99	65.347	ENSMLUG00000010141	-	82	65.347	Myotis_lucifugus
ENSCJAG00000004054	-	97	61.809	ENSNGAG00000022875	Gemin8	82	61.809	Nannospalax_galili
ENSCJAG00000004054	-	92	41.489	ENSNBRG00000024342	gemin8	74	41.579	Neolamprologus_brichardi
ENSCJAG00000004054	-	92	67.021	ENSNLEG00000030297	-	76	67.021	Nomascus_leucogenys
ENSCJAG00000004054	-	99	82.178	ENSNLEG00000034467	GEMIN8	83	82.178	Nomascus_leucogenys
ENSCJAG00000004054	-	94	53.403	ENSMEUG00000014793	GEMIN8	79	51.832	Notamacropus_eugenii
ENSCJAG00000004054	-	97	59.898	ENSODEG00000004288	GEMIN8	82	61.421	Octodon_degus
ENSCJAG00000004054	-	95	36.410	ENSONIG00000001003	gemin8	77	38.462	Oreochromis_niloticus
ENSCJAG00000004054	-	96	50.510	ENSOANG00000002604	GEMIN8	80	50.000	Ornithorhynchus_anatinus
ENSCJAG00000004054	-	98	63.500	ENSOCUG00000022328	-	82	63.000	Oryctolagus_cuniculus
ENSCJAG00000004054	-	87	40.884	ENSOCUG00000014632	-	79	39.779	Oryctolagus_cuniculus
ENSCJAG00000004054	-	92	41.361	ENSORLG00000006606	gemin8	76	40.957	Oryzias_latipes
ENSCJAG00000004054	-	92	43.386	ENSORLG00020000188	gemin8	76	43.617	Oryzias_latipes_hni
ENSCJAG00000004054	-	95	40.000	ENSOMEG00000009646	gemin8	73	40.957	Oryzias_melastigma
ENSCJAG00000004054	-	99	63.184	ENSOGAG00000002881	-	82	63.184	Otolemur_garnettii
ENSCJAG00000004054	-	98	60.500	ENSOGAG00000030890	-	82	60.500	Otolemur_garnettii
ENSCJAG00000004054	-	93	60.526	ENSOGAG00000030851	-	79	60.526	Otolemur_garnettii
ENSCJAG00000004054	-	98	63.000	ENSOGAG00000029658	-	82	63.000	Otolemur_garnettii
ENSCJAG00000004054	-	97	51.000	ENSOARG00000011696	GEMIN8	74	50.754	Ovis_aries
ENSCJAG00000004054	-	99	82.178	ENSPPAG00000005337	GEMIN8	83	82.178	Pan_paniscus
ENSCJAG00000004054	-	98	60.000	ENSPPRG00000007470	GEMIN8	82	58.500	Panthera_pardus
ENSCJAG00000004054	-	99	47.596	ENSPTIG00000008428	GEMIN8	81	47.115	Panthera_tigris_altaica
ENSCJAG00000004054	-	99	82.266	ENSPTRG00000048272	GEMIN8	83	82.266	Pan_troglodytes
ENSCJAG00000004054	-	99	81.683	ENSPANG00000016642	GEMIN8	83	81.683	Papio_anubis
ENSCJAG00000004054	-	99	64.532	ENSPANG00000030043	-	84	62.562	Papio_anubis
ENSCJAG00000004054	-	90	39.891	ENSPKIG00000020338	GEMIN8	73	41.530	Paramormyrops_kingsleyae
ENSCJAG00000004054	-	97	48.744	ENSPSIG00000011906	GEMIN8	82	47.739	Pelodiscus_sinensis
ENSCJAG00000004054	-	92	34.081	ENSPMGG00000014057	gemin8	76	34.081	Periophthalmus_magnuspinnatus
ENSCJAG00000004054	-	94	53.927	ENSPCIG00000029845	GEMIN8	79	52.356	Phascolarctos_cinereus
ENSCJAG00000004054	-	95	41.538	ENSPFOG00000004081	gemin8	77	42.051	Poecilia_formosa
ENSCJAG00000004054	-	95	43.077	ENSPLAG00000006720	gemin8	77	44.103	Poecilia_latipinna
ENSCJAG00000004054	-	92	41.799	ENSPMEG00000010102	gemin8	73	44.444	Poecilia_mexicana
ENSCJAG00000004054	-	92	43.386	ENSPREG00000012475	gemin8	74	43.915	Poecilia_reticulata
ENSCJAG00000004054	-	99	82.673	ENSPPYG00000020136	GEMIN8	83	82.673	Pongo_abelii
ENSCJAG00000004054	-	98	61.194	ENSPCAG00000013168	-	59	61.194	Procavia_capensis
ENSCJAG00000004054	-	98	73.500	ENSPCOG00000015687	GEMIN8	82	73.500	Propithecus_coquereli
ENSCJAG00000004054	-	99	59.512	ENSPVAG00000009751	GEMIN8	61	61.951	Pteropus_vampyrus
ENSCJAG00000004054	-	95	39.487	ENSPNYG00000015361	gemin8	72	41.799	Pundamilia_nyererei
ENSCJAG00000004054	-	92	40.957	ENSPNAG00000017992	gemin8	79	42.105	Pygocentrus_nattereri
ENSCJAG00000004054	-	97	59.391	ENSRNOG00000029038	Gemin8	82	60.406	Rattus_norvegicus
ENSCJAG00000004054	-	93	83.158	ENSRBIG00000009966	GEMIN8	83	83.168	Rhinopithecus_bieti
ENSCJAG00000004054	-	99	73.267	ENSRROG00000031124	-	60	73.267	Rhinopithecus_roxellana
ENSCJAG00000004054	-	93	83.158	ENSRROG00000039241	GEMIN8	83	83.168	Rhinopithecus_roxellana
ENSCJAG00000004054	-	95	64.433	ENSRROG00000045459	-	80	62.371	Rhinopithecus_roxellana
ENSCJAG00000004054	-	99	68.812	ENSSBOG00000021955	-	80	67.327	Saimiri_boliviensis_boliviensis
ENSCJAG00000004054	-	99	91.089	ENSSBOG00000018178	-	83	91.089	Saimiri_boliviensis_boliviensis
ENSCJAG00000004054	-	96	52.551	ENSSHAG00000001412	GEMIN8	80	51.020	Sarcophilus_harrisii
ENSCJAG00000004054	-	92	39.894	ENSSFOG00015023420	gemin8	76	39.894	Scleropages_formosus
ENSCJAG00000004054	-	95	40.513	ENSSMAG00000014019	gemin8	77	41.053	Scophthalmus_maximus
ENSCJAG00000004054	-	95	42.051	ENSSDUG00000005069	gemin8	68	42.051	Seriola_dumerili
ENSCJAG00000004054	-	92	43.386	ENSSLDG00000004417	gemin8	74	43.386	Seriola_lalandi_dorsalis
ENSCJAG00000004054	-	94	48.438	ENSSPUG00000003529	GEMIN8	78	47.917	Sphenodon_punctatus
ENSCJAG00000004054	-	95	38.974	ENSSPAG00000011260	gemin8	74	42.328	Stegastes_partitus
ENSCJAG00000004054	-	99	53.623	ENSSSCG00000012127	GEMIN8	82	53.623	Sus_scrofa
ENSCJAG00000004054	-	92	39.683	ENSTRUG00000022129	gemin8	74	39.153	Takifugu_rubripes
ENSCJAG00000004054	-	92	39.153	ENSTNIG00000001453	gemin8	74	41.799	Tetraodon_nigroviridis
ENSCJAG00000004054	-	99	66.832	ENSTBEG00000004921	GEMIN8	59	66.832	Tupaia_belangeri
ENSCJAG00000004054	-	99	55.392	ENSTTRG00000009266	-	58	54.680	Tursiops_truncatus
ENSCJAG00000004054	-	94	51.282	ENSUAMG00000013267	GEMIN8	80	50.521	Ursus_americanus
ENSCJAG00000004054	-	97	54.315	ENSUMAG00000005467	GEMIN8	81	50.754	Ursus_maritimus
ENSCJAG00000004054	-	98	62.000	ENSVVUG00000009383	GEMIN8	81	61.000	Vulpes_vulpes
ENSCJAG00000004054	-	94	43.500	ENSXETG00000013349	gemin8	78	43.147	Xenopus_tropicalis
ENSCJAG00000004054	-	95	40.000	ENSXMAG00000026315	gemin8	77	42.051	Xiphophorus_maculatus