EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000004422 (Gene tree)
Gene ID: 100402701
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 20847 bases
Position: chrNTIC01038833.1:28465947-28486793
Accession: 100402701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000064304	RRM_1	PF00076.22	1.3e-25	1	1
ENSCJAP00000008117	RRM_1	PF00076.22	2.2e-25	1	1
ENSCJAP00000065764	RRM_1	PF00076.22	2.3e-25	1	1
ENSCJAP00000008115	RRM_1	PF00076.22	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000008582	CSTF2-203	1734	-	ENSCJAP00000008117	577 (aa)	XP_003735829	F7HWT7
ENSCJAT00000085995	CSTF2-202	1779	-	ENSCJAP00000065764	592 (aa)	-	A0A2R8NDK5
ENSCJAT00000008580	CSTF2-201	1794	-	ENSCJAP00000008115	597 (aa)	XP_002763125	F7HWU0
ENSCJAT00000068311	CSTF2-204	1404	-	ENSCJAP00000064304	467 (aa)	-	A0A2R8NBM5

Gene Model

Click here to download ENSCJAG00000004422's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000004422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000004422	CSTF2	70	64.095	ENSCJAG00000011554	-	97	66.867
ENSCJAG00000004422	CSTF2	66	62.422	ENSCJAG00000039083	-	93	64.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000004422	CSTF2	100	98.995	ENSG00000101811	CSTF2	100	98.995	Homo_sapiens
ENSCJAG00000004422	CSTF2	99	61.102	ENSAPOG00000005630	cstf2	97	62.722	Acanthochromis_polyacanthus
ENSCJAG00000004422	CSTF2	100	96.970	ENSAMEG00000002082	CSTF2	100	95.033	Ailuropoda_melanoleuca
ENSCJAG00000004422	CSTF2	87	82.231	ENSACIG00000012852	cstf2	96	60.442	Amphilophus_citrinellus
ENSCJAG00000004422	CSTF2	99	60.521	ENSAOCG00000020905	cstf2	97	61.584	Amphiprion_ocellaris
ENSCJAG00000004422	CSTF2	99	59.931	ENSAPEG00000006526	cstf2	97	61.584	Amphiprion_percula
ENSCJAG00000004422	CSTF2	84	80.247	ENSATEG00000018186	cstf2	96	61.723	Anabas_testudineus
ENSCJAG00000004422	CSTF2	96	84.588	ENSAPLG00000007255	CSTF2	98	78.136	Anas_platyrhynchos
ENSCJAG00000004422	CSTF2	100	100.000	ENSANAG00000022342	CSTF2	100	99.653	Aotus_nancymaae
ENSCJAG00000004422	CSTF2	52	82.645	ENSACLG00000000779	cstf2	93	62.651	Astatotilapia_calliptera
ENSCJAG00000004422	CSTF2	81	93.548	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSCJAG00000004422	CSTF2	100	95.286	ENSBTAG00000003547	CSTF2	100	95.101	Bos_taurus
ENSCJAG00000004422	CSTF2	100	95.494	ENSCAFG00000017551	CSTF2	100	95.494	Canis_familiaris
ENSCJAG00000004422	CSTF2	100	95.960	ENSCAFG00020007619	CSTF2	100	95.645	Canis_lupus_dingo
ENSCJAG00000004422	CSTF2	100	95.623	ENSCHIG00000016994	CSTF2	100	95.439	Capra_hircus
ENSCJAG00000004422	CSTF2	100	98.653	ENSTSYG00000006529	CSTF2	100	97.822	Carlito_syrichta
ENSCJAG00000004422	CSTF2	100	95.310	ENSCPOG00000015255	CSTF2	100	95.310	Cavia_porcellus
ENSCJAG00000004422	CSTF2	100	100.000	ENSCCAG00000032975	CSTF2	100	100.000	Cebus_capucinus
ENSCJAG00000004422	CSTF2	100	98.660	ENSCATG00000022835	CSTF2	100	98.660	Cercocebus_atys
ENSCJAG00000004422	CSTF2	100	95.310	ENSCLAG00000001904	CSTF2	100	95.310	Chinchilla_lanigera
ENSCJAG00000004422	CSTF2	100	98.827	ENSCSAG00000010360	CSTF2	100	98.827	Chlorocebus_sabaeus
ENSCJAG00000004422	CSTF2	71	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSCJAG00000004422	CSTF2	100	87.291	ENSCPBG00000014293	CSTF2	100	76.117	Chrysemys_picta_bellii
ENSCJAG00000004422	CSTF2	100	98.827	ENSCANG00000030612	CSTF2	100	98.827	Colobus_angolensis_palliatus
ENSCJAG00000004422	CSTF2	100	92.069	ENSCGRG00001023023	Cstf2	100	92.069	Cricetulus_griseus_chok1gshd
ENSCJAG00000004422	CSTF2	100	88.966	ENSCGRG00000003897	Cstf2	100	88.966	Cricetulus_griseus_crigri
ENSCJAG00000004422	CSTF2	99	60.870	ENSCVAG00000005731	cstf2	96	61.818	Cyprinodon_variegatus
ENSCJAG00000004422	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSCJAG00000004422	CSTF2	100	92.228	ENSDORG00000007195	Cstf2	100	92.228	Dipodomys_ordii
ENSCJAG00000004422	CSTF2	79	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSCJAG00000004422	CSTF2	100	96.633	ENSEASG00005001216	CSTF2	100	96.315	Equus_asinus_asinus
ENSCJAG00000004422	CSTF2	100	96.633	ENSECAG00000009325	CSTF2	100	96.315	Equus_caballus
ENSCJAG00000004422	CSTF2	100	96.633	ENSFCAG00000007000	CSTF2	100	96.147	Felis_catus
ENSCJAG00000004422	CSTF2	90	82.558	ENSFALG00000003859	CSTF2	100	77.482	Ficedula_albicollis
ENSCJAG00000004422	CSTF2	100	96.296	ENSFDAG00000002416	CSTF2	100	96.187	Fukomys_damarensis
ENSCJAG00000004422	CSTF2	87	81.148	ENSFHEG00000017065	cstf2	94	61.139	Fundulus_heteroclitus
ENSCJAG00000004422	CSTF2	83	77.966	ENSGMOG00000005145	cstf2	99	57.715	Gadus_morhua
ENSCJAG00000004422	CSTF2	100	79.622	ENSGALG00000006760	CSTF2	100	84.667	Gallus_gallus
ENSCJAG00000004422	CSTF2	53	79.920	ENSGAFG00000020027	cstf2	96	59.348	Gambusia_affinis
ENSCJAG00000004422	CSTF2	99	56.055	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSCJAG00000004422	CSTF2	100	86.139	ENSGAGG00000006037	CSTF2	100	78.788	Gopherus_agassizii
ENSCJAG00000004422	CSTF2	100	98.995	ENSGGOG00000022267	CSTF2	100	98.995	Gorilla_gorilla
ENSCJAG00000004422	CSTF2	52	82.573	ENSHBUG00000016183	cstf2	93	62.575	Haplochromis_burtoni
ENSCJAG00000004422	CSTF2	100	96.187	ENSHGLG00000000659	-	100	96.187	Heterocephalus_glaber_female
ENSCJAG00000004422	CSTF2	100	81.802	ENSHGLG00000013455	-	100	81.802	Heterocephalus_glaber_female
ENSCJAG00000004422	CSTF2	100	96.187	ENSHGLG00100001130	-	100	96.187	Heterocephalus_glaber_male
ENSCJAG00000004422	CSTF2	100	81.976	ENSHGLG00100015391	-	100	81.976	Heterocephalus_glaber_male
ENSCJAG00000004422	CSTF2	99	58.662	ENSHCOG00000005157	cstf2	97	63.747	Hippocampus_comes
ENSCJAG00000004422	CSTF2	100	60.118	ENSIPUG00000017839	cstf2	99	60.891	Ictalurus_punctatus
ENSCJAG00000004422	CSTF2	100	95.147	ENSSTOG00000023445	CSTF2	100	95.147	Ictidomys_tridecemlineatus
ENSCJAG00000004422	CSTF2	100	93.761	ENSJJAG00000020507	Cstf2	100	93.761	Jaculus_jaculus
ENSCJAG00000004422	CSTF2	52	81.743	ENSKMAG00000001068	cstf2	96	62.069	Kryptolebias_marmoratus
ENSCJAG00000004422	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	85	94.915	Labrus_bergylta
ENSCJAG00000004422	CSTF2	99	77.667	ENSLACG00000015927	CSTF2	99	67.647	Latimeria_chalumnae
ENSCJAG00000004422	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	64.164	Lepisosteus_oculatus
ENSCJAG00000004422	CSTF2	100	94.949	ENSLAFG00000000474	CSTF2	100	91.625	Loxodonta_africana
ENSCJAG00000004422	CSTF2	100	98.827	ENSMFAG00000043888	CSTF2	100	98.827	Macaca_fascicularis
ENSCJAG00000004422	CSTF2	100	99.422	ENSMMUG00000013008	CSTF2	100	98.649	Macaca_mulatta
ENSCJAG00000004422	CSTF2	100	98.827	ENSMNEG00000041824	CSTF2	100	98.827	Macaca_nemestrina
ENSCJAG00000004422	CSTF2	100	98.827	ENSMLEG00000036870	CSTF2	100	98.827	Mandrillus_leucophaeus
ENSCJAG00000004422	CSTF2	97	56.574	ENSMAMG00000020364	cstf2	96	60.986	Mastacembelus_armatus
ENSCJAG00000004422	CSTF2	52	82.645	ENSMZEG00005007200	cstf2	96	62.651	Maylandia_zebra
ENSCJAG00000004422	CSTF2	90	79.157	ENSMGAG00000004139	CSTF2	100	84.064	Meleagris_gallopavo
ENSCJAG00000004422	CSTF2	100	92.414	ENSMAUG00000000965	Cstf2	100	92.414	Mesocricetus_auratus
ENSCJAG00000004422	CSTF2	100	96.970	ENSMICG00000014121	CSTF2	100	96.315	Microcebus_murinus
ENSCJAG00000004422	CSTF2	100	91.034	ENSMOCG00000008081	Cstf2	100	91.034	Microtus_ochrogaster
ENSCJAG00000004422	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	96	56.432	Mola_mola
ENSCJAG00000004422	CSTF2	100	84.512	ENSMODG00000011785	CSTF2	100	81.864	Monodelphis_domestica
ENSCJAG00000004422	CSTF2	100	93.603	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.414	Mus_caroli
ENSCJAG00000004422	CSTF2	100	92.414	ENSMUSG00000031256	Cstf2	100	92.414	Mus_musculus
ENSCJAG00000004422	CSTF2	100	93.603	MGP_PahariEiJ_G0031923	Cstf2	100	92.573	Mus_pahari
ENSCJAG00000004422	CSTF2	100	93.603	MGP_SPRETEiJ_G0034548	Cstf2	100	92.414	Mus_spretus
ENSCJAG00000004422	CSTF2	100	96.296	ENSMPUG00000002339	CSTF2	100	90.317	Mustela_putorius_furo
ENSCJAG00000004422	CSTF2	100	92.593	ENSMLUG00000004598	CSTF2	98	88.712	Myotis_lucifugus
ENSCJAG00000004422	CSTF2	100	94.301	ENSNGAG00000021985	Cstf2	100	94.473	Nannospalax_galili
ENSCJAG00000004422	CSTF2	92	60.097	ENSNBRG00000021694	cstf2	100	56.148	Neolamprologus_brichardi
ENSCJAG00000004422	CSTF2	100	98.827	ENSNLEG00000007510	CSTF2	100	98.827	Nomascus_leucogenys
ENSCJAG00000004422	CSTF2	100	84.797	ENSMEUG00000011186	-	100	83.362	Notamacropus_eugenii
ENSCJAG00000004422	CSTF2	100	83.108	ENSMEUG00000007875	-	100	78.856	Notamacropus_eugenii
ENSCJAG00000004422	CSTF2	89	82.449	ENSMEUG00000014025	-	100	80.798	Notamacropus_eugenii
ENSCJAG00000004422	CSTF2	87	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSCJAG00000004422	CSTF2	100	94.801	ENSODEG00000002059	CSTF2	100	94.801	Octodon_degus
ENSCJAG00000004422	CSTF2	92	79.600	ENSONIG00000002631	cstf2	99	57.590	Oreochromis_niloticus
ENSCJAG00000004422	CSTF2	87	98.214	ENSOANG00000004208	CSTF2	87	90.000	Ornithorhynchus_anatinus
ENSCJAG00000004422	CSTF2	100	94.801	ENSOCUG00000010468	CSTF2	100	94.801	Oryctolagus_cuniculus
ENSCJAG00000004422	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	59.722	Oryzias_latipes
ENSCJAG00000004422	CSTF2	86	80.913	ENSORLG00020021917	cstf2	97	60.119	Oryzias_latipes_hni
ENSCJAG00000004422	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	59.722	Oryzias_latipes_hsok
ENSCJAG00000004422	CSTF2	99	58.179	ENSOMEG00000015507	cstf2	97	60.792	Oryzias_melastigma
ENSCJAG00000004422	CSTF2	100	96.633	ENSOGAG00000011192	CSTF2	100	89.825	Otolemur_garnettii
ENSCJAG00000004422	CSTF2	100	95.623	ENSOARG00000001022	CSTF2	100	95.118	Ovis_aries
ENSCJAG00000004422	CSTF2	100	98.995	ENSPPAG00000031804	CSTF2	100	98.995	Pan_paniscus
ENSCJAG00000004422	CSTF2	100	96.633	ENSPPRG00000022492	CSTF2	100	96.315	Panthera_pardus
ENSCJAG00000004422	CSTF2	100	95.980	ENSPTIG00000009922	CSTF2	100	95.980	Panthera_tigris_altaica
ENSCJAG00000004422	CSTF2	100	98.995	ENSPTRG00000022090	CSTF2	100	98.995	Pan_troglodytes
ENSCJAG00000004422	CSTF2	100	98.827	ENSPANG00000002303	CSTF2	100	98.827	Papio_anubis
ENSCJAG00000004422	CSTF2	99	62.857	ENSPKIG00000005033	cstf2	97	60.727	Paramormyrops_kingsleyae
ENSCJAG00000004422	CSTF2	99	58.153	ENSPMGG00000006534	cstf2	97	59.302	Periophthalmus_magnuspinnatus
ENSCJAG00000004422	CSTF2	100	91.379	ENSPEMG00000019415	Cstf2	100	91.379	Peromyscus_maniculatus_bairdii
ENSCJAG00000004422	CSTF2	100	85.185	ENSPCIG00000002989	CSTF2	100	82.266	Phascolarctos_cinereus
ENSCJAG00000004422	CSTF2	79	80.321	ENSPREG00000011481	cstf2	77	71.753	Poecilia_reticulata
ENSCJAG00000004422	CSTF2	100	98.995	ENSPPYG00000020541	CSTF2	100	98.995	Pongo_abelii
ENSCJAG00000004422	CSTF2	100	97.980	ENSPCOG00000027744	CSTF2	100	97.152	Propithecus_coquereli
ENSCJAG00000004422	CSTF2	92	89.831	ENSPVAG00000008342	CSTF2	100	80.610	Pteropus_vampyrus
ENSCJAG00000004422	CSTF2	99	61.214	ENSPNAG00000018887	cstf2	97	62.144	Pygocentrus_nattereri
ENSCJAG00000004422	CSTF2	100	91.897	ENSRNOG00000048025	Cstf2	100	91.897	Rattus_norvegicus
ENSCJAG00000004422	CSTF2	100	97.054	ENSRBIG00000030745	CSTF2	100	97.054	Rhinopithecus_bieti
ENSCJAG00000004422	CSTF2	100	98.827	ENSRROG00000045042	CSTF2	100	98.827	Rhinopithecus_roxellana
ENSCJAG00000004422	CSTF2	100	99.665	ENSSBOG00000021649	CSTF2	100	99.665	Saimiri_boliviensis_boliviensis
ENSCJAG00000004422	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	83.160	Sarcophilus_harrisii
ENSCJAG00000004422	CSTF2	88	76.712	ENSSFOG00015006348	cstf2	98	63.727	Scleropages_formosus
ENSCJAG00000004422	CSTF2	98	59.600	ENSSMAG00000013463	cstf2	97	59.284	Scophthalmus_maximus
ENSCJAG00000004422	CSTF2	100	75.000	ENSSPUG00000005288	-	99	80.085	Sphenodon_punctatus
ENSCJAG00000004422	CSTF2	100	96.296	ENSSSCG00000012486	CSTF2	100	96.296	Sus_scrofa
ENSCJAG00000004422	CSTF2	100	80.060	ENSTGUG00000002253	CSTF2	100	79.082	Taeniopygia_guttata
ENSCJAG00000004422	CSTF2	99	58.254	ENSTNIG00000016860	cstf2	99	59.345	Tetraodon_nigroviridis
ENSCJAG00000004422	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSCJAG00000004422	CSTF2	100	96.360	ENSTTRG00000013556	CSTF2	100	96.360	Tursiops_truncatus
ENSCJAG00000004422	CSTF2	100	96.970	ENSUAMG00000026605	CSTF2	100	95.515	Ursus_americanus
ENSCJAG00000004422	CSTF2	96	96.633	ENSUMAG00000012417	CSTF2	100	96.886	Ursus_maritimus
ENSCJAG00000004422	CSTF2	85	90.654	ENSVPAG00000006466	CSTF2	72	95.627	Vicugna_pacos
ENSCJAG00000004422	CSTF2	100	95.667	ENSVVUG00000004717	CSTF2	100	95.667	Vulpes_vulpes
ENSCJAG00000004422	CSTF2	94	92.188	ENSXETG00000009642	cstf2	100	65.812	Xenopus_tropicalis
ENSCJAG00000004422	CSTF2	88	76.829	ENSXCOG00000016436	cstf2	91	96.970	Xiphophorus_couchianus
ENSCJAG00000004422	CSTF2	78	80.488	ENSXMAG00000013524	cstf2	86	71.987	Xiphophorus_maculatus