EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000004454 (Gene tree)
Gene ID: 100393120
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 102550 bases
Position: chrNTIC01011112.1:147810942-147913491
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000008109	La	PF05383.17	1.1e-20	1	1
ENSCJAP00000008094	La	PF05383.17	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000008559	LARP1-202	4050	-	ENSCJAP00000008094	1098 (aa)	-	F6XLD7
ENSCJAT00000008574	LARP1-201	3066	-	ENSCJAP00000008109	1021 (aa)	-	F7HWW2

Gene Model

Click here to download ENSCJAG00000004454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000004454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000004454	LARP1	86	60.112	ENSCJAG00000003338	LARP1B	99	61.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000004454	LARP1	100	98.629	ENSG00000155506	LARP1	100	98.913	Homo_sapiens
ENSCJAG00000004454	LARP1	88	81.938	ENSAPOG00000020685	larp1	98	83.645	Acanthochromis_polyacanthus
ENSCJAG00000004454	LARP1	93	97.173	ENSAMEG00000016673	LARP1	100	97.074	Ailuropoda_melanoleuca
ENSCJAG00000004454	LARP1	93	74.633	ENSACIG00000012994	larp1	94	74.627	Amphilophus_citrinellus
ENSCJAG00000004454	LARP1	81	70.471	ENSAOCG00000007792	larp1	97	71.037	Amphiprion_ocellaris
ENSCJAG00000004454	LARP1	98	64.658	ENSAPEG00000022246	larp1	97	64.318	Amphiprion_percula
ENSCJAG00000004454	LARP1	97	62.535	ENSATEG00000013523	larp1	96	62.546	Anabas_testudineus
ENSCJAG00000004454	LARP1	87	83.389	ENSAPLG00000007559	LARP1	100	83.835	Anas_platyrhynchos
ENSCJAG00000004454	LARP1	94	79.775	ENSACAG00000004071	LARP1	100	79.543	Anolis_carolinensis
ENSCJAG00000004454	LARP1	100	99.314	ENSANAG00000029949	LARP1	100	99.314	Aotus_nancymaae
ENSCJAG00000004454	LARP1	99	63.693	ENSACLG00000015256	larp1	98	67.271	Astatotilapia_calliptera
ENSCJAG00000004454	LARP1	89	71.304	ENSAMXG00000000859	larp1	89	69.958	Astyanax_mexicanus
ENSCJAG00000004454	LARP1	100	94.177	ENSBTAG00000008443	LARP1	100	94.904	Bos_taurus
ENSCJAG00000004454	LARP1	93	97.694	ENSCAFG00000017639	LARP1	99	97.694	Canis_familiaris
ENSCJAG00000004454	LARP1	87	97.654	ENSCAFG00020023860	LARP1	100	97.654	Canis_lupus_dingo
ENSCJAG00000004454	LARP1	99	95.233	ENSCHIG00000014414	LARP1	100	92.896	Capra_hircus
ENSCJAG00000004454	LARP1	99	94.008	ENSTSYG00000013732	LARP1	99	94.499	Carlito_syrichta
ENSCJAG00000004454	LARP1	83	93.972	ENSCAPG00000013865	LARP1	87	93.972	Cavia_aperea
ENSCJAG00000004454	LARP1	93	96.541	ENSCPOG00000003377	LARP1	100	96.541	Cavia_porcellus
ENSCJAG00000004454	LARP1	100	98.998	ENSCCAG00000025201	LARP1	100	98.998	Cebus_capucinus
ENSCJAG00000004454	LARP1	100	98.629	ENSCATG00000030675	LARP1	100	98.629	Cercocebus_atys
ENSCJAG00000004454	LARP1	93	96.754	ENSCLAG00000012755	LARP1	97	96.754	Chinchilla_lanigera
ENSCJAG00000004454	LARP1	87	95.297	ENSCSAG00000010800	LARP1	100	95.297	Chlorocebus_sabaeus
ENSCJAG00000004454	LARP1	83	93.421	ENSCHOG00000012716	LARP1	92	94.222	Choloepus_hoffmanni
ENSCJAG00000004454	LARP1	98	78.635	ENSCPBG00000002173	LARP1	98	78.926	Chrysemys_picta_bellii
ENSCJAG00000004454	LARP1	100	98.531	ENSCANG00000037418	LARP1	100	98.531	Colobus_angolensis_palliatus
ENSCJAG00000004454	LARP1	100	90.727	ENSCGRG00001016913	Larp1	100	90.818	Cricetulus_griseus_chok1gshd
ENSCJAG00000004454	LARP1	90	90.642	ENSCGRG00000009916	Larp1	99	90.968	Cricetulus_griseus_crigri
ENSCJAG00000004454	LARP1	99	63.489	ENSCSEG00000016431	larp1	97	64.593	Cynoglossus_semilaevis
ENSCJAG00000004454	LARP1	99	63.196	ENSCVAG00000022687	larp1	96	63.645	Cyprinodon_variegatus
ENSCJAG00000004454	LARP1	92	66.209	ENSDARG00000101722	larp1	95	65.479	Danio_rerio
ENSCJAG00000004454	LARP1	100	94.203	ENSDNOG00000012073	LARP1	100	93.750	Dasypus_novemcinctus
ENSCJAG00000004454	LARP1	93	93.194	ENSDORG00000002897	Larp1	99	93.194	Dipodomys_ordii
ENSCJAG00000004454	LARP1	86	96.250	ENSETEG00000020251	LARP1	100	96.250	Echinops_telfairi
ENSCJAG00000004454	LARP1	100	95.005	ENSEASG00005001070	LARP1	100	95.368	Equus_asinus_asinus
ENSCJAG00000004454	LARP1	100	95.005	ENSECAG00000017002	LARP1	79	95.368	Equus_caballus
ENSCJAG00000004454	LARP1	91	90.043	ENSEEUG00000001065	LARP1	100	90.471	Erinaceus_europaeus
ENSCJAG00000004454	LARP1	99	62.745	ENSELUG00000019403	larp1	99	63.191	Esox_lucius
ENSCJAG00000004454	LARP1	100	96.007	ENSFCAG00000000592	LARP1	100	96.007	Felis_catus
ENSCJAG00000004454	LARP1	82	80.618	ENSFALG00000008335	LARP1	99	80.975	Ficedula_albicollis
ENSCJAG00000004454	LARP1	93	96.747	ENSFDAG00000021125	LARP1	100	96.747	Fukomys_damarensis
ENSCJAG00000004454	LARP1	64	53.942	ENSFHEG00000020307	larp1	92	63.743	Fundulus_heteroclitus
ENSCJAG00000004454	LARP1	100	77.223	ENSGALG00000040109	LARP1	100	77.132	Gallus_gallus
ENSCJAG00000004454	LARP1	98	78.261	ENSGAGG00000025113	LARP1	99	80.963	Gopherus_agassizii
ENSCJAG00000004454	LARP1	100	98.433	ENSGGOG00000006048	LARP1	100	98.433	Gorilla_gorilla
ENSCJAG00000004454	LARP1	99	64.068	ENSHBUG00000020762	larp1	97	69.196	Haplochromis_burtoni
ENSCJAG00000004454	LARP1	100	91.667	ENSHGLG00000006267	LARP1	100	91.486	Heterocephalus_glaber_female
ENSCJAG00000004454	LARP1	93	96.226	ENSHGLG00100014230	-	100	96.226	Heterocephalus_glaber_male
ENSCJAG00000004454	LARP1	98	75.486	ENSHGLG00100003395	-	98	75.301	Heterocephalus_glaber_male
ENSCJAG00000004454	LARP1	92	79.236	ENSHCOG00000010786	larp1	99	78.998	Hippocampus_comes
ENSCJAG00000004454	LARP1	91	66.136	ENSIPUG00000019105	Larp1	96	64.542	Ictalurus_punctatus
ENSCJAG00000004454	LARP1	93	93.927	ENSSTOG00000005678	LARP1	99	93.927	Ictidomys_tridecemlineatus
ENSCJAG00000004454	LARP1	100	85.909	ENSJJAG00000016950	Larp1	100	86.364	Jaculus_jaculus
ENSCJAG00000004454	LARP1	97	64.885	ENSKMAG00000018468	larp1	95	68.092	Kryptolebias_marmoratus
ENSCJAG00000004454	LARP1	99	63.182	ENSLBEG00000027172	larp1	99	63.067	Labrus_bergylta
ENSCJAG00000004454	LARP1	94	68.876	ENSLOCG00000012457	larp1	99	69.498	Lepisosteus_oculatus
ENSCJAG00000004454	LARP1	100	92.663	ENSLAFG00000008991	LARP1	100	92.935	Loxodonta_africana
ENSCJAG00000004454	LARP1	100	98.139	ENSMFAG00000031651	LARP1	100	98.139	Macaca_fascicularis
ENSCJAG00000004454	LARP1	93	95.178	ENSMMUG00000009411	LARP1	99	95.178	Macaca_mulatta
ENSCJAG00000004454	LARP1	100	94.025	ENSMNEG00000039294	LARP1	100	98.656	Macaca_nemestrina
ENSCJAG00000004454	LARP1	100	98.727	ENSMLEG00000035142	LARP1	100	98.727	Mandrillus_leucophaeus
ENSCJAG00000004454	LARP1	99	63.453	ENSMAMG00000021788	larp1	99	63.316	Mastacembelus_armatus
ENSCJAG00000004454	LARP1	99	63.693	ENSMZEG00005009345	larp1	98	67.271	Maylandia_zebra
ENSCJAG00000004454	LARP1	93	80.558	ENSMGAG00000005696	LARP1	100	80.331	Meleagris_gallopavo
ENSCJAG00000004454	LARP1	100	90.364	ENSMAUG00000001385	Larp1	100	90.455	Mesocricetus_auratus
ENSCJAG00000004454	LARP1	99	92.731	ENSMICG00000000837	LARP1	99	97.204	Microcebus_murinus
ENSCJAG00000004454	LARP1	100	90.727	ENSMOCG00000008920	Larp1	100	90.818	Microtus_ochrogaster
ENSCJAG00000004454	LARP1	94	49.517	ENSMMOG00000013364	larp1	95	52.703	Mola_mola
ENSCJAG00000004454	LARP1	94	82.887	ENSMODG00000008663	LARP1	100	82.887	Monodelphis_domestica
ENSCJAG00000004454	LARP1	99	62.719	ENSMALG00000017180	larp1	95	67.144	Monopterus_albus
ENSCJAG00000004454	LARP1	100	90.455	MGP_CAROLIEiJ_G0016383	Larp1	100	90.727	Mus_caroli
ENSCJAG00000004454	LARP1	100	90.455	ENSMUSG00000037331	Larp1	100	90.727	Mus_musculus
ENSCJAG00000004454	LARP1	100	90.645	MGP_PahariEiJ_G0017518	Larp1	100	90.827	Mus_pahari
ENSCJAG00000004454	LARP1	100	90.545	MGP_SPRETEiJ_G0017225	Larp1	100	90.727	Mus_spretus
ENSCJAG00000004454	LARP1	82	95.138	ENSMPUG00000013564	LARP1	99	95.580	Mustela_putorius_furo
ENSCJAG00000004454	LARP1	93	93.277	ENSMLUG00000002608	LARP1	100	93.187	Myotis_lucifugus
ENSCJAG00000004454	LARP1	94	90.710	ENSNGAG00000001098	Larp1	99	90.795	Nannospalax_galili
ENSCJAG00000004454	LARP1	90	68.528	ENSNBRG00000008963	larp1	94	67.946	Neolamprologus_brichardi
ENSCJAG00000004454	LARP1	100	95.495	ENSNLEG00000016588	LARP1	100	95.495	Nomascus_leucogenys
ENSCJAG00000004454	LARP1	93	76.996	ENSMEUG00000002957	LARP1	100	77.206	Notamacropus_eugenii
ENSCJAG00000004454	LARP1	93	96.331	ENSOPRG00000013014	LARP1	100	96.331	Ochotona_princeps
ENSCJAG00000004454	LARP1	95	94.731	ENSODEG00000010824	LARP1	100	95.912	Octodon_degus
ENSCJAG00000004454	LARP1	99	65.277	ENSONIG00000017308	larp1	99	65.492	Oreochromis_niloticus
ENSCJAG00000004454	LARP1	94	81.725	ENSOANG00000005096	LARP1	99	82.256	Ornithorhynchus_anatinus
ENSCJAG00000004454	LARP1	100	94.727	ENSOCUG00000013066	LARP1	100	94.727	Oryctolagus_cuniculus
ENSCJAG00000004454	LARP1	97	63.586	ENSORLG00000000824	larp1	96	71.603	Oryzias_latipes
ENSCJAG00000004454	LARP1	97	63.401	ENSORLG00020022241	larp1	97	63.536	Oryzias_latipes_hni
ENSCJAG00000004454	LARP1	97	62.015	ENSORLG00015007538	larp1	97	62.120	Oryzias_latipes_hsok
ENSCJAG00000004454	LARP1	97	61.927	ENSOMEG00000003134	larp1	97	62.031	Oryzias_melastigma
ENSCJAG00000004454	LARP1	93	96.855	ENSOGAG00000016750	LARP1	100	96.855	Otolemur_garnettii
ENSCJAG00000004454	LARP1	93	94.019	ENSOARG00000009893	LARP1	99	94.439	Ovis_aries
ENSCJAG00000004454	LARP1	100	98.629	ENSPPAG00000042993	LARP1	100	98.629	Pan_paniscus
ENSCJAG00000004454	LARP1	99	92.836	ENSPPRG00000009780	LARP1	100	92.836	Panthera_pardus
ENSCJAG00000004454	LARP1	99	92.458	ENSPTIG00000007013	LARP1	100	92.458	Panthera_tigris_altaica
ENSCJAG00000004454	LARP1	100	98.433	ENSPTRG00000017447	LARP1	100	98.433	Pan_troglodytes
ENSCJAG00000004454	LARP1	100	98.433	ENSPANG00000008080	LARP1	100	98.433	Papio_anubis
ENSCJAG00000004454	LARP1	99	64.722	ENSPKIG00000010096	larp1	97	65.374	Paramormyrops_kingsleyae
ENSCJAG00000004454	LARP1	97	62.915	ENSPKIG00000017153	-	99	61.836	Paramormyrops_kingsleyae
ENSCJAG00000004454	LARP1	93	65.417	ENSPMGG00000011599	larp1	93	68.191	Periophthalmus_magnuspinnatus
ENSCJAG00000004454	LARP1	93	92.251	ENSPEMG00000022523	Larp1	99	92.147	Peromyscus_maniculatus_bairdii
ENSCJAG00000004454	LARP1	99	78.449	ENSPCIG00000019242	LARP1	89	88.402	Phascolarctos_cinereus
ENSCJAG00000004454	LARP1	97	62.321	ENSPFOG00000005836	larp1	96	62.545	Poecilia_formosa
ENSCJAG00000004454	LARP1	97	62.862	ENSPLAG00000008936	larp1	96	62.919	Poecilia_latipinna
ENSCJAG00000004454	LARP1	97	63.702	ENSPMEG00000013656	larp1	96	62.903	Poecilia_mexicana
ENSCJAG00000004454	LARP1	90	67.644	ENSPREG00000005726	larp1	95	67.925	Poecilia_reticulata
ENSCJAG00000004454	LARP1	93	90.356	ENSPCAG00000006407	LARP1	100	90.566	Procavia_capensis
ENSCJAG00000004454	LARP1	93	89.099	ENSPCOG00000016949	LARP1	100	92.662	Propithecus_coquereli
ENSCJAG00000004454	LARP1	100	93.478	ENSPVAG00000002262	LARP1	100	94.746	Pteropus_vampyrus
ENSCJAG00000004454	LARP1	99	63.604	ENSPNYG00000007938	larp1	98	67.170	Pundamilia_nyererei
ENSCJAG00000004454	LARP1	99	65.055	ENSPNAG00000021427	larp1	96	66.476	Pygocentrus_nattereri
ENSCJAG00000004454	LARP1	94	92.476	ENSRNOG00000031544	Larp1	99	92.469	Rattus_norvegicus
ENSCJAG00000004454	LARP1	100	98.335	ENSRBIG00000038005	LARP1	100	98.335	Rhinopithecus_bieti
ENSCJAG00000004454	LARP1	100	98.433	ENSRROG00000034073	LARP1	100	98.992	Rhinopithecus_roxellana
ENSCJAG00000004454	LARP1	100	97.453	ENSSBOG00000019816	LARP1	100	97.453	Saimiri_boliviensis_boliviensis
ENSCJAG00000004454	LARP1	93	84.591	ENSSHAG00000011115	LARP1	100	84.519	Sarcophilus_harrisii
ENSCJAG00000004454	LARP1	99	64.084	ENSSFOG00015018058	-	95	65.052	Scleropages_formosus
ENSCJAG00000004454	LARP1	95	66.501	ENSSFOG00015020304	larp1	94	66.903	Scleropages_formosus
ENSCJAG00000004454	LARP1	94	62.235	ENSSMAG00000007468	larp1	98	62.072	Scophthalmus_maximus
ENSCJAG00000004454	LARP1	99	63.149	ENSSDUG00000000268	larp1	95	70.636	Seriola_dumerili
ENSCJAG00000004454	LARP1	86	69.369	ENSSLDG00000016505	larp1	95	70.405	Seriola_lalandi_dorsalis
ENSCJAG00000004454	LARP1	60	93.993	ENSSARG00000013907	-	89	93.993	Sorex_araneus
ENSCJAG00000004454	LARP1	96	79.676	ENSSPUG00000012179	-	100	75.530	Sphenodon_punctatus
ENSCJAG00000004454	LARP1	99	63.741	ENSSPAG00000003910	larp1	99	63.564	Stegastes_partitus
ENSCJAG00000004454	LARP1	100	94.374	ENSSSCG00000017069	LARP1	100	96.429	Sus_scrofa
ENSCJAG00000004454	LARP1	90	83.007	ENSTGUG00000000704	LARP1	100	83.224	Taeniopygia_guttata
ENSCJAG00000004454	LARP1	97	65.365	ENSTRUG00000009470	larp1	99	62.795	Takifugu_rubripes
ENSCJAG00000004454	LARP1	86	93.898	ENSTBEG00000003381	LARP1	100	94.463	Tupaia_belangeri
ENSCJAG00000004454	LARP1	93	96.646	ENSTTRG00000015934	LARP1	100	96.646	Tursiops_truncatus
ENSCJAG00000004454	LARP1	100	96.279	ENSUAMG00000019334	LARP1	100	96.279	Ursus_americanus
ENSCJAG00000004454	LARP1	93	94.099	ENSUMAG00000002934	LARP1	99	94.099	Ursus_maritimus
ENSCJAG00000004454	LARP1	87	97.654	ENSVVUG00000004644	LARP1	100	97.654	Vulpes_vulpes
ENSCJAG00000004454	LARP1	93	76.155	ENSXETG00000008413	larp1	91	76.883	Xenopus_tropicalis
ENSCJAG00000004454	LARP1	82	73.961	ENSXCOG00000004022	larp1	93	74.366	Xiphophorus_couchianus
ENSCJAG00000004454	LARP1	97	63.645	ENSXMAG00000018780	larp1	96	62.703	Xiphophorus_maculatus