EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000004566 (Gene tree)
Gene ID: 100389881
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 12722 bases
Position: chrNTIC01011113.1:9862990-9875711
Accession: 100389881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000008315	TRM	PF02005.16	4.2e-148	1	1
ENSCJAP00000008312	TRM	PF02005.16	3.3e-139	1	1
ENSCJAP00000008312	Met_10	PF02475.16	1.4e-05	1	1
ENSCJAP00000008315	Met_10	PF02475.16	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000008789	TRMT1-201	1959	XM_008987384	ENSCJAP00000008315	652 (aa)	XP_008985632	F7HZ06
ENSCJAT00000008785	TRMT1-202	1872	-	ENSCJAP00000008312	623 (aa)	-	F7HZ11

Gene Model

Click here to download ENSCJAG00000004566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000004566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000004566	TRMT1	99	90.839	ENSG00000104907	TRMT1	100	94.241	Homo_sapiens
ENSCJAG00000004566	TRMT1	99	83.231	ENSAMEG00000012598	TRMT1	96	83.231	Ailuropoda_melanoleuca
ENSCJAG00000004566	TRMT1	88	57.491	ENSACIG00000018680	trmt1	88	57.491	Amphilophus_citrinellus
ENSCJAG00000004566	TRMT1	88	64.223	ENSAOCG00000006781	trmt1	85	64.223	Amphiprion_ocellaris
ENSCJAG00000004566	TRMT1	88	64.223	ENSAPEG00000007712	trmt1	85	64.223	Amphiprion_percula
ENSCJAG00000004566	TRMT1	88	65.739	ENSATEG00000001872	trmt1	84	65.739	Anabas_testudineus
ENSCJAG00000004566	TRMT1	94	63.592	ENSACAG00000003825	TRMT1	99	63.592	Anolis_carolinensis
ENSCJAG00000004566	TRMT1	100	94.504	ENSANAG00000023016	TRMT1	99	95.353	Aotus_nancymaae
ENSCJAG00000004566	TRMT1	88	62.653	ENSACLG00000010073	trmt1	92	62.653	Astatotilapia_calliptera
ENSCJAG00000004566	TRMT1	88	65.517	ENSAMXG00000012026	trmt1	85	65.517	Astyanax_mexicanus
ENSCJAG00000004566	TRMT1	99	83.127	ENSBTAG00000019325	TRMT1	91	83.127	Bos_taurus
ENSCJAG00000004566	TRMT1	81	39.815	WBGene00006613	trm-1	96	39.815	Caenorhabditis_elegans
ENSCJAG00000004566	TRMT1	99	84.615	ENSCAFG00000017070	TRMT1	99	84.992	Canis_familiaris
ENSCJAG00000004566	TRMT1	99	84.863	ENSCAFG00020005397	TRMT1	98	84.863	Canis_lupus_dingo
ENSCJAG00000004566	TRMT1	99	82.844	ENSCHIG00000013569	TRMT1	97	82.844	Capra_hircus
ENSCJAG00000004566	TRMT1	99	79.289	ENSTSYG00000003207	TRMT1	99	79.141	Carlito_syrichta
ENSCJAG00000004566	TRMT1	87	75.528	ENSCAPG00000003355	TRMT1	99	75.696	Cavia_aperea
ENSCJAG00000004566	TRMT1	100	78.254	ENSCPOG00000011754	TRMT1	98	78.254	Cavia_porcellus
ENSCJAG00000004566	TRMT1	99	91.935	ENSCCAG00000022263	TRMT1	99	93.408	Cebus_capucinus
ENSCJAG00000004566	TRMT1	86	74.134	ENSCATG00000038220	-	98	74.134	Cercocebus_atys
ENSCJAG00000004566	TRMT1	99	89.676	ENSCATG00000039850	TRMT1	98	89.676	Cercocebus_atys
ENSCJAG00000004566	TRMT1	99	81.988	ENSCLAG00000015295	TRMT1	99	78.527	Chinchilla_lanigera
ENSCJAG00000004566	TRMT1	80	91.969	ENSCSAG00000006500	TRMT1	99	91.969	Chlorocebus_sabaeus
ENSCJAG00000004566	TRMT1	96	64.263	ENSCPBG00000023866	TRMT1	94	64.890	Chrysemys_picta_bellii
ENSCJAG00000004566	TRMT1	85	45.310	ENSCING00000002884	-	99	45.310	Ciona_intestinalis
ENSCJAG00000004566	TRMT1	84	45.570	ENSCSAVG00000010927	-	100	45.251	Ciona_savignyi
ENSCJAG00000004566	TRMT1	96	68.730	ENSCANG00000031650	-	96	68.661	Colobus_angolensis_palliatus
ENSCJAG00000004566	TRMT1	99	73.611	ENSCANG00000040631	TRMT1	98	73.611	Colobus_angolensis_palliatus
ENSCJAG00000004566	TRMT1	98	80.125	ENSCGRG00001022594	Trmt1	96	80.125	Cricetulus_griseus_chok1gshd
ENSCJAG00000004566	TRMT1	98	80.125	ENSCGRG00000017732	Trmt1	96	80.125	Cricetulus_griseus_crigri
ENSCJAG00000004566	TRMT1	88	64.460	ENSCSEG00000001643	trmt1	84	67.773	Cynoglossus_semilaevis
ENSCJAG00000004566	TRMT1	88	64.808	ENSCVAG00000011886	trmt1	85	64.808	Cyprinodon_variegatus
ENSCJAG00000004566	TRMT1	88	64.261	ENSDARG00000010978	trmt1	85	64.433	Danio_rerio
ENSCJAG00000004566	TRMT1	84	57.554	ENSDNOG00000048240	-	94	57.554	Dasypus_novemcinctus
ENSCJAG00000004566	TRMT1	99	80.186	ENSDORG00000014298	Trmt1	98	80.186	Dipodomys_ordii
ENSCJAG00000004566	TRMT1	80	46.125	FBgn0032430	CG6388	89	46.125	Drosophila_melanogaster
ENSCJAG00000004566	TRMT1	55	78.322	ENSETEG00000015483	-	52	78.322	Echinops_telfairi
ENSCJAG00000004566	TRMT1	79	54.102	ENSEBUG00000003449	trmt1	74	54.175	Eptatretus_burgeri
ENSCJAG00000004566	TRMT1	96	82.456	ENSEASG00005004050	TRMT1	99	82.278	Equus_asinus_asinus
ENSCJAG00000004566	TRMT1	96	82.616	ENSECAG00000016149	TRMT1	99	82.437	Equus_caballus
ENSCJAG00000004566	TRMT1	60	69.036	ENSEEUG00000014102	-	99	69.036	Erinaceus_europaeus
ENSCJAG00000004566	TRMT1	88	63.149	ENSELUG00000021659	trmt1	85	63.149	Esox_lucius
ENSCJAG00000004566	TRMT1	99	83.280	ENSFCAG00000000483	TRMT1	98	83.280	Felis_catus
ENSCJAG00000004566	TRMT1	99	81.169	ENSFDAG00000007386	TRMT1	97	81.169	Fukomys_damarensis
ENSCJAG00000004566	TRMT1	82	66.419	ENSFHEG00000012865	trmt1	90	66.419	Fundulus_heteroclitus
ENSCJAG00000004566	TRMT1	88	59.201	ENSGMOG00000006564	trmt1	98	59.722	Gadus_morhua
ENSCJAG00000004566	TRMT1	88	65.217	ENSGAFG00000011862	trmt1	88	65.993	Gambusia_affinis
ENSCJAG00000004566	TRMT1	90	61.186	ENSGACG00000000227	trmt1	99	59.236	Gasterosteus_aculeatus
ENSCJAG00000004566	TRMT1	90	67.682	ENSGAGG00000016432	TRMT1	86	67.682	Gopherus_agassizii
ENSCJAG00000004566	TRMT1	99	90.994	ENSGGOG00000014007	TRMT1	98	90.755	Gorilla_gorilla
ENSCJAG00000004566	TRMT1	86	57.706	ENSHBUG00000008821	trmt1	92	57.706	Haplochromis_burtoni
ENSCJAG00000004566	TRMT1	99	81.748	ENSHGLG00000015972	TRMT1	98	81.748	Heterocephalus_glaber_female
ENSCJAG00000004566	TRMT1	99	75.957	ENSHGLG00100018112	TRMT1	98	75.957	Heterocephalus_glaber_male
ENSCJAG00000004566	TRMT1	88	61.565	ENSHCOG00000009447	trmt1	88	61.565	Hippocampus_comes
ENSCJAG00000004566	TRMT1	88	63.435	ENSIPUG00000002899	trmt1	85	63.481	Ictalurus_punctatus
ENSCJAG00000004566	TRMT1	98	84.615	ENSSTOG00000012531	TRMT1	96	84.615	Ictidomys_tridecemlineatus
ENSCJAG00000004566	TRMT1	95	80.776	ENSJJAG00000017154	Trmt1	94	80.435	Jaculus_jaculus
ENSCJAG00000004566	TRMT1	88	65.445	ENSKMAG00000011809	trmt1	95	64.572	Kryptolebias_marmoratus
ENSCJAG00000004566	TRMT1	88	64.572	ENSLBEG00000012703	trmt1	84	64.572	Labrus_bergylta
ENSCJAG00000004566	TRMT1	89	55.137	ENSLACG00000014585	TRMT1	99	53.846	Latimeria_chalumnae
ENSCJAG00000004566	TRMT1	74	69.792	ENSLOCG00000006479	trmt1	84	69.792	Lepisosteus_oculatus
ENSCJAG00000004566	TRMT1	99	82.743	ENSLAFG00000014072	TRMT1	99	82.743	Loxodonta_africana
ENSCJAG00000004566	TRMT1	99	89.831	ENSMFAG00000033143	TRMT1	98	89.831	Macaca_fascicularis
ENSCJAG00000004566	TRMT1	99	86.452	ENSMMUG00000001167	TRMT1	99	86.452	Macaca_mulatta
ENSCJAG00000004566	TRMT1	99	89.985	ENSMNEG00000037867	TRMT1	98	89.985	Macaca_nemestrina
ENSCJAG00000004566	TRMT1	99	89.677	ENSMLEG00000016142	TRMT1	98	89.677	Mandrillus_leucophaeus
ENSCJAG00000004566	TRMT1	88	65.620	ENSMAMG00000004357	trmt1	85	65.620	Mastacembelus_armatus
ENSCJAG00000004566	TRMT1	88	63.002	ENSMZEG00005014510	trmt1	85	63.002	Maylandia_zebra
ENSCJAG00000004566	TRMT1	99	78.947	ENSMAUG00000011134	Trmt1	97	78.947	Mesocricetus_auratus
ENSCJAG00000004566	TRMT1	99	86.133	ENSMICG00000000793	TRMT1	98	86.133	Microcebus_murinus
ENSCJAG00000004566	TRMT1	98	79.658	ENSMOCG00000015895	Trmt1	96	79.658	Microtus_ochrogaster
ENSCJAG00000004566	TRMT1	88	63.002	ENSMMOG00000011097	trmt1	92	63.002	Mola_mola
ENSCJAG00000004566	TRMT1	94	71.729	ENSMODG00000011619	TRMT1	99	71.729	Monodelphis_domestica
ENSCJAG00000004566	TRMT1	98	79.969	MGP_CAROLIEiJ_G0031304	Trmt1	99	81.298	Mus_caroli
ENSCJAG00000004566	TRMT1	98	79.503	ENSMUSG00000001909	Trmt1	99	80.534	Mus_musculus
ENSCJAG00000004566	TRMT1	98	79.658	MGP_SPRETEiJ_G0032422	Trmt1	99	80.534	Mus_spretus
ENSCJAG00000004566	TRMT1	99	84.025	ENSMPUG00000004210	TRMT1	93	84.025	Mustela_putorius_furo
ENSCJAG00000004566	TRMT1	99	82.462	ENSMLUG00000012809	TRMT1	96	82.462	Myotis_lucifugus
ENSCJAG00000004566	TRMT1	98	79.844	ENSNGAG00000022486	Trmt1	96	79.844	Nannospalax_galili
ENSCJAG00000004566	TRMT1	76	65.680	ENSNBRG00000024376	trmt1	85	65.680	Neolamprologus_brichardi
ENSCJAG00000004566	TRMT1	83	89.851	ENSNLEG00000013019	-	98	89.851	Nomascus_leucogenys
ENSCJAG00000004566	TRMT1	92	73.544	ENSMEUG00000013756	TRMT1	100	73.544	Notamacropus_eugenii
ENSCJAG00000004566	TRMT1	83	80.813	ENSOPRG00000009471	-	81	80.813	Ochotona_princeps
ENSCJAG00000004566	TRMT1	99	81.260	ENSODEG00000010323	TRMT1	98	81.260	Octodon_degus
ENSCJAG00000004566	TRMT1	95	62.440	ENSONIG00000000400	trmt1	99	62.440	Oreochromis_niloticus
ENSCJAG00000004566	TRMT1	80	85.660	ENSOCUG00000021934	TRMT1	99	85.660	Oryctolagus_cuniculus
ENSCJAG00000004566	TRMT1	88	60.517	ENSORLG00000020074	trmt1	90	60.517	Oryzias_latipes
ENSCJAG00000004566	TRMT1	88	63.525	ENSORLG00020007561	trmt1	89	63.525	Oryzias_latipes_hni
ENSCJAG00000004566	TRMT1	88	63.700	ENSORLG00015006547	trmt1	86	63.700	Oryzias_latipes_hsok
ENSCJAG00000004566	TRMT1	88	64.223	ENSOMEG00000019343	trmt1	86	64.223	Oryzias_melastigma
ENSCJAG00000004566	TRMT1	95	82.880	ENSOGAG00000025576	TRMT1	97	83.040	Otolemur_garnettii
ENSCJAG00000004566	TRMT1	99	70.353	ENSOARG00000009397	TRMT1	91	70.541	Ovis_aries
ENSCJAG00000004566	TRMT1	99	74.768	ENSPPRG00000012117	TRMT1	99	74.768	Panthera_pardus
ENSCJAG00000004566	TRMT1	81	86.103	ENSPTIG00000008833	TRMT1	96	86.322	Panthera_tigris_altaica
ENSCJAG00000004566	TRMT1	99	66.718	ENSPTRG00000050421	-	98	66.718	Pan_troglodytes
ENSCJAG00000004566	TRMT1	99	90.994	ENSPTRG00000010557	TRMT1	98	90.755	Pan_troglodytes
ENSCJAG00000004566	TRMT1	96	62.698	ENSPANG00000034058	-	96	62.698	Papio_anubis
ENSCJAG00000004566	TRMT1	99	90.000	ENSPANG00000009247	TRMT1	98	90.000	Papio_anubis
ENSCJAG00000004566	TRMT1	88	65.565	ENSPKIG00000005309	trmt1	84	65.565	Paramormyrops_kingsleyae
ENSCJAG00000004566	TRMT1	85	58.423	ENSPSIG00000008762	TRMT1	80	58.423	Pelodiscus_sinensis
ENSCJAG00000004566	TRMT1	88	63.130	ENSPMGG00000019764	trmt1	90	63.130	Periophthalmus_magnuspinnatus
ENSCJAG00000004566	TRMT1	98	81.566	ENSPEMG00000016247	Trmt1	96	81.566	Peromyscus_maniculatus_bairdii
ENSCJAG00000004566	TRMT1	89	57.586	ENSPMAG00000004329	trmt1	90	57.586	Petromyzon_marinus
ENSCJAG00000004566	TRMT1	97	71.184	ENSPCIG00000019273	TRMT1	98	71.184	Phascolarctos_cinereus
ENSCJAG00000004566	TRMT1	88	66.435	ENSPFOG00000008527	trmt1	88	66.435	Poecilia_formosa
ENSCJAG00000004566	TRMT1	88	66.261	ENSPLAG00000018788	trmt1	87	70.213	Poecilia_latipinna
ENSCJAG00000004566	TRMT1	88	66.261	ENSPMEG00000013120	trmt1	88	66.261	Poecilia_mexicana
ENSCJAG00000004566	TRMT1	88	65.391	ENSPREG00000000211	trmt1	85	65.913	Poecilia_reticulata
ENSCJAG00000004566	TRMT1	99	90.217	ENSPPYG00000009622	TRMT1	98	89.985	Pongo_abelii
ENSCJAG00000004566	TRMT1	99	74.962	ENSPCAG00000003698	TRMT1	99	74.962	Procavia_capensis
ENSCJAG00000004566	TRMT1	99	86.935	ENSPCOG00000008653	TRMT1	98	86.935	Propithecus_coquereli
ENSCJAG00000004566	TRMT1	99	83.538	ENSPVAG00000015076	TRMT1	98	83.538	Pteropus_vampyrus
ENSCJAG00000004566	TRMT1	88	61.955	ENSPNYG00000013960	trmt1	92	61.955	Pundamilia_nyererei
ENSCJAG00000004566	TRMT1	82	66.390	ENSPNAG00000024859	trmt1	88	66.390	Pygocentrus_nattereri
ENSCJAG00000004566	TRMT1	96	80.960	ENSRNOG00000002914	Trmt1	97	80.960	Rattus_norvegicus
ENSCJAG00000004566	TRMT1	99	89.368	ENSRBIG00000038324	TRMT1	98	89.368	Rhinopithecus_bieti
ENSCJAG00000004566	TRMT1	96	68.463	ENSRBIG00000037505	-	97	68.396	Rhinopithecus_bieti
ENSCJAG00000004566	TRMT1	96	67.829	ENSRROG00000031847	-	97	67.767	Rhinopithecus_roxellana
ENSCJAG00000004566	TRMT1	99	89.214	ENSRROG00000028599	TRMT1	98	89.214	Rhinopithecus_roxellana
ENSCJAG00000004566	TRMT1	78	37.453	YDR120C	-	92	37.453	Saccharomyces_cerevisiae
ENSCJAG00000004566	TRMT1	97	92.703	ENSSBOG00000028861	TRMT1	99	92.765	Saimiri_boliviensis_boliviensis
ENSCJAG00000004566	TRMT1	88	75.436	ENSSHAG00000014381	TRMT1	99	72.920	Sarcophilus_harrisii
ENSCJAG00000004566	TRMT1	88	65.739	ENSSFOG00015004139	trmt1	84	65.739	Scleropages_formosus
ENSCJAG00000004566	TRMT1	88	64.931	ENSSMAG00000021136	trmt1	85	64.931	Scophthalmus_maximus
ENSCJAG00000004566	TRMT1	88	64.921	ENSSDUG00000012740	trmt1	84	64.921	Seriola_dumerili
ENSCJAG00000004566	TRMT1	88	64.398	ENSSLDG00000005971	trmt1	84	64.398	Seriola_lalandi_dorsalis
ENSCJAG00000004566	TRMT1	86	81.915	ENSSARG00000005138	TRMT1	99	81.915	Sorex_araneus
ENSCJAG00000004566	TRMT1	80	57.985	ENSSPUG00000001084	TRMT1	89	58.555	Sphenodon_punctatus
ENSCJAG00000004566	TRMT1	89	62.630	ENSSPAG00000007153	trmt1	94	62.630	Stegastes_partitus
ENSCJAG00000004566	TRMT1	97	84.360	ENSSSCG00000013744	TRMT1	99	84.360	Sus_scrofa
ENSCJAG00000004566	TRMT1	86	61.955	ENSTRUG00000010700	trmt1	85	62.129	Takifugu_rubripes
ENSCJAG00000004566	TRMT1	88	63.763	ENSTNIG00000018808	trmt1	97	63.763	Tetraodon_nigroviridis
ENSCJAG00000004566	TRMT1	98	81.591	ENSTTRG00000006379	TRMT1	98	81.692	Tursiops_truncatus
ENSCJAG00000004566	TRMT1	99	83.172	ENSUAMG00000022911	TRMT1	99	83.172	Ursus_americanus
ENSCJAG00000004566	TRMT1	97	82.780	ENSUMAG00000006027	TRMT1	99	82.780	Ursus_maritimus
ENSCJAG00000004566	TRMT1	99	84.923	ENSVVUG00000024177	TRMT1	98	84.923	Vulpes_vulpes
ENSCJAG00000004566	TRMT1	71	69.414	ENSXETG00000033863	TRMT1	92	69.414	Xenopus_tropicalis
ENSCJAG00000004566	TRMT1	88	65.565	ENSXCOG00000015733	trmt1	88	66.087	Xiphophorus_couchianus
ENSCJAG00000004566	TRMT1	88	65.052	ENSXMAG00000013823	trmt1	98	65.571	Xiphophorus_maculatus