EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000005045 (Gene tree)
Gene ID: 100389343
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Plus strand
Length: 75080 bases
Position: chrNTIC01004446.1:68980237-69055316
Accession: 100389343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000046560	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSCJAP00000046560	RRM_1	PF00076.22	9.5e-40	1	3
ENSCJAP00000046560	RRM_1	PF00076.22	9.5e-40	2	3
ENSCJAP00000046560	RRM_1	PF00076.22	9.5e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000062687	A1CF-201	1889	XM_002756358	ENSCJAP00000046560	594 (aa)	XP_002756404	F7I3P8

Gene Model

Click here to download ENSCJAG00000005045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000005045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000005045	A1CF	88	69.841	ENSCJAG00000001768	RBM46	99	69.841
ENSCJAG00000005045	A1CF	52	52.427	ENSCJAG00000015352	SYNCRIP	57	50.987
ENSCJAG00000005045	A1CF	53	51.724	ENSCJAG00000005512	HNRNPR	50	51.724
ENSCJAG00000005045	A1CF	75	58.901	ENSCJAG00000019385	RBM47	87	68.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000005045	A1CF	100	98.655	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSCJAG00000005045	A1CF	100	73.754	ENSAPOG00000008259	a1cf	100	73.754	Acanthochromis_polyacanthus
ENSCJAG00000005045	A1CF	100	96.128	ENSAMEG00000000523	A1CF	100	96.128	Ailuropoda_melanoleuca
ENSCJAG00000005045	A1CF	100	75.530	ENSACIG00000008632	a1cf	100	76.835	Amphilophus_citrinellus
ENSCJAG00000005045	A1CF	100	74.426	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSCJAG00000005045	A1CF	100	75.410	ENSAPEG00000009537	a1cf	100	76.230	Amphiprion_percula
ENSCJAG00000005045	A1CF	100	76.221	ENSATEG00000013720	a1cf	100	77.524	Anabas_testudineus
ENSCJAG00000005045	A1CF	100	89.076	ENSAPLG00000002964	A1CF	100	89.076	Anas_platyrhynchos
ENSCJAG00000005045	A1CF	100	83.361	ENSACAG00000015269	A1CF	100	83.361	Anolis_carolinensis
ENSCJAG00000005045	A1CF	100	98.316	ENSANAG00000019974	A1CF	100	98.316	Aotus_nancymaae
ENSCJAG00000005045	A1CF	100	73.322	ENSACLG00000017428	a1cf	100	75.286	Astatotilapia_calliptera
ENSCJAG00000005045	A1CF	100	74.876	ENSAMXG00000018180	a1cf	100	75.041	Astyanax_mexicanus
ENSCJAG00000005045	A1CF	100	94.454	ENSBTAG00000021195	A1CF	100	95.604	Bos_taurus
ENSCJAG00000005045	A1CF	100	96.128	ENSCAFG00000015581	A1CF	100	96.128	Canis_familiaris
ENSCJAG00000005045	A1CF	100	96.128	ENSCAFG00020026421	A1CF	100	96.128	Canis_lupus_dingo
ENSCJAG00000005045	A1CF	100	95.294	ENSCHIG00000020411	A1CF	100	95.630	Capra_hircus
ENSCJAG00000005045	A1CF	95	97.158	ENSTSYG00000001755	A1CF	100	96.078	Carlito_syrichta
ENSCJAG00000005045	A1CF	100	83.436	ENSCAPG00000017386	A1CF	100	83.436	Cavia_aperea
ENSCJAG00000005045	A1CF	100	96.801	ENSCPOG00000009807	A1CF	100	96.801	Cavia_porcellus
ENSCJAG00000005045	A1CF	100	99.663	ENSCCAG00000018168	A1CF	100	99.663	Cebus_capucinus
ENSCJAG00000005045	A1CF	100	97.306	ENSCATG00000043715	A1CF	100	97.306	Cercocebus_atys
ENSCJAG00000005045	A1CF	100	96.309	ENSCLAG00000010424	A1CF	100	96.309	Chinchilla_lanigera
ENSCJAG00000005045	A1CF	100	98.485	ENSCSAG00000007032	A1CF	100	98.485	Chlorocebus_sabaeus
ENSCJAG00000005045	A1CF	98	90.339	ENSCHOG00000009089	A1CF	98	90.355	Choloepus_hoffmanni
ENSCJAG00000005045	A1CF	100	88.908	ENSCPBG00000026464	A1CF	100	88.926	Chrysemys_picta_bellii
ENSCJAG00000005045	A1CF	100	98.485	ENSCANG00000038032	A1CF	100	98.485	Colobus_angolensis_palliatus
ENSCJAG00000005045	A1CF	100	94.622	ENSCGRG00001017413	A1cf	100	94.790	Cricetulus_griseus_chok1gshd
ENSCJAG00000005045	A1CF	100	93.782	ENSCGRG00000017332	A1cf	100	94.454	Cricetulus_griseus_crigri
ENSCJAG00000005045	A1CF	100	75.124	ENSCSEG00000002361	a1cf	100	76.412	Cynoglossus_semilaevis
ENSCJAG00000005045	A1CF	100	75.081	ENSCVAG00000010520	a1cf	100	76.547	Cyprinodon_variegatus
ENSCJAG00000005045	A1CF	100	78.333	ENSDARG00000002968	a1cf	100	79.667	Danio_rerio
ENSCJAG00000005045	A1CF	100	95.462	ENSDNOG00000002829	A1CF	100	95.462	Dasypus_novemcinctus
ENSCJAG00000005045	A1CF	81	93.116	ENSETEG00000012527	A1CF	81	93.116	Echinops_telfairi
ENSCJAG00000005045	A1CF	100	97.320	ENSEASG00005012924	A1CF	100	97.320	Equus_asinus_asinus
ENSCJAG00000005045	A1CF	100	96.817	ENSECAG00000010424	A1CF	100	96.817	Equus_caballus
ENSCJAG00000005045	A1CF	78	80.472	ENSEEUG00000000013	A1CF	100	80.472	Erinaceus_europaeus
ENSCJAG00000005045	A1CF	100	79.000	ENSELUG00000003159	a1cf	100	79.833	Esox_lucius
ENSCJAG00000005045	A1CF	100	93.434	ENSFCAG00000011179	A1CF	100	93.603	Felis_catus
ENSCJAG00000005045	A1CF	100	86.218	ENSFALG00000013183	A1CF	100	86.218	Ficedula_albicollis
ENSCJAG00000005045	A1CF	100	94.286	ENSFDAG00000019371	A1CF	100	94.286	Fukomys_damarensis
ENSCJAG00000005045	A1CF	100	70.358	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSCJAG00000005045	A1CF	100	72.231	ENSGMOG00000018943	a1cf	100	72.231	Gadus_morhua
ENSCJAG00000005045	A1CF	95	88.298	ENSGALG00000003765	A1CF	97	88.298	Gallus_gallus
ENSCJAG00000005045	A1CF	100	70.395	ENSGAFG00000014868	a1cf	100	71.382	Gambusia_affinis
ENSCJAG00000005045	A1CF	100	74.342	ENSGACG00000010241	a1cf	100	75.000	Gasterosteus_aculeatus
ENSCJAG00000005045	A1CF	94	88.434	ENSGAGG00000016508	A1CF	97	88.455	Gopherus_agassizii
ENSCJAG00000005045	A1CF	100	98.824	ENSGGOG00000009670	A1CF	100	98.824	Gorilla_gorilla
ENSCJAG00000005045	A1CF	100	74.551	ENSHBUG00000021959	a1cf	100	76.509	Haplochromis_burtoni
ENSCJAG00000005045	A1CF	100	96.471	ENSHGLG00000008955	A1CF	100	96.471	Heterocephalus_glaber_female
ENSCJAG00000005045	A1CF	100	95.462	ENSHGLG00100000518	A1CF	100	95.462	Heterocephalus_glaber_male
ENSCJAG00000005045	A1CF	100	70.147	ENSHCOG00000017669	a1cf	100	72.964	Hippocampus_comes
ENSCJAG00000005045	A1CF	89	83.209	ENSIPUG00000010367	a1cf	96	83.209	Ictalurus_punctatus
ENSCJAG00000005045	A1CF	100	77.073	ENSKMAG00000006568	a1cf	100	77.886	Kryptolebias_marmoratus
ENSCJAG00000005045	A1CF	99	75.817	ENSLBEG00000020994	a1cf	98	77.467	Labrus_bergylta
ENSCJAG00000005045	A1CF	100	81.605	ENSLACG00000008061	A1CF	100	81.438	Latimeria_chalumnae
ENSCJAG00000005045	A1CF	100	82.471	ENSLOCG00000006302	a1cf	100	82.304	Lepisosteus_oculatus
ENSCJAG00000005045	A1CF	100	95.126	ENSLAFG00000015462	A1CF	100	95.126	Loxodonta_africana
ENSCJAG00000005045	A1CF	100	97.475	ENSMFAG00000035948	A1CF	100	97.475	Macaca_fascicularis
ENSCJAG00000005045	A1CF	100	97.475	ENSMMUG00000007077	A1CF	100	97.475	Macaca_mulatta
ENSCJAG00000005045	A1CF	100	97.306	ENSMNEG00000031454	A1CF	100	97.306	Macaca_nemestrina
ENSCJAG00000005045	A1CF	100	98.653	ENSMLEG00000037223	A1CF	100	98.653	Mandrillus_leucophaeus
ENSCJAG00000005045	A1CF	100	73.650	ENSMAMG00000010402	a1cf	100	76.144	Mastacembelus_armatus
ENSCJAG00000005045	A1CF	100	75.960	ENSMZEG00005013245	a1cf	100	76.962	Maylandia_zebra
ENSCJAG00000005045	A1CF	100	88.423	ENSMGAG00000001507	A1CF	100	88.423	Meleagris_gallopavo
ENSCJAG00000005045	A1CF	100	93.782	ENSMAUG00000007422	A1cf	100	94.622	Mesocricetus_auratus
ENSCJAG00000005045	A1CF	100	95.485	ENSMICG00000003377	A1CF	100	95.485	Microcebus_murinus
ENSCJAG00000005045	A1CF	100	94.454	ENSMOCG00000021536	A1cf	100	94.286	Microtus_ochrogaster
ENSCJAG00000005045	A1CF	100	67.541	ENSMMOG00000009422	a1cf	100	69.672	Mola_mola
ENSCJAG00000005045	A1CF	89	91.115	ENSMODG00000016478	A1CF	97	91.115	Monodelphis_domestica
ENSCJAG00000005045	A1CF	100	72.287	ENSMALG00000012992	a1cf	100	71.953	Monopterus_albus
ENSCJAG00000005045	A1CF	100	93.613	MGP_CAROLIEiJ_G0022873	A1cf	100	93.950	Mus_caroli
ENSCJAG00000005045	A1CF	100	93.613	ENSMUSG00000052595	A1cf	99	96.316	Mus_musculus
ENSCJAG00000005045	A1CF	100	93.109	MGP_PahariEiJ_G0014366	A1cf	100	93.109	Mus_pahari
ENSCJAG00000005045	A1CF	100	93.109	MGP_SPRETEiJ_G0023792	A1cf	100	93.445	Mus_spretus
ENSCJAG00000005045	A1CF	100	90.404	ENSMPUG00000016971	A1CF	100	90.404	Mustela_putorius_furo
ENSCJAG00000005045	A1CF	100	94.958	ENSMLUG00000016071	A1CF	100	94.958	Myotis_lucifugus
ENSCJAG00000005045	A1CF	100	95.462	ENSNGAG00000015136	A1cf	100	95.462	Nannospalax_galili
ENSCJAG00000005045	A1CF	100	74.878	ENSNBRG00000001712	a1cf	100	76.835	Neolamprologus_brichardi
ENSCJAG00000005045	A1CF	100	99.496	ENSNLEG00000012028	A1CF	100	99.496	Nomascus_leucogenys
ENSCJAG00000005045	A1CF	94	90.036	ENSMEUG00000015909	A1CF	100	90.036	Notamacropus_eugenii
ENSCJAG00000005045	A1CF	88	85.524	ENSOPRG00000010667	A1CF	98	85.553	Ochotona_princeps
ENSCJAG00000005045	A1CF	100	75.204	ENSONIG00000019105	a1cf	100	76.346	Oreochromis_niloticus
ENSCJAG00000005045	A1CF	78	88.865	ENSOANG00000007360	A1CF	99	88.865	Ornithorhynchus_anatinus
ENSCJAG00000005045	A1CF	100	93.456	ENSOCUG00000011587	A1CF	100	94.799	Oryctolagus_cuniculus
ENSCJAG00000005045	A1CF	100	74.230	ENSORLG00000013342	a1cf	100	74.230	Oryzias_latipes
ENSCJAG00000005045	A1CF	100	75.817	ENSORLG00020000586	a1cf	100	76.346	Oryzias_latipes_hni
ENSCJAG00000005045	A1CF	100	75.654	ENSORLG00015018569	a1cf	100	76.183	Oryzias_latipes_hsok
ENSCJAG00000005045	A1CF	100	74.959	ENSOMEG00000013531	a1cf	100	74.795	Oryzias_melastigma
ENSCJAG00000005045	A1CF	100	96.296	ENSOGAG00000012884	A1CF	100	96.296	Otolemur_garnettii
ENSCJAG00000005045	A1CF	100	95.294	ENSOARG00000013695	A1CF	100	95.630	Ovis_aries
ENSCJAG00000005045	A1CF	97	96.880	ENSPPAG00000028115	A1CF	100	99.190	Pan_paniscus
ENSCJAG00000005045	A1CF	100	95.118	ENSPPRG00000012180	A1CF	100	95.286	Panthera_pardus
ENSCJAG00000005045	A1CF	100	95.118	ENSPTIG00000021223	A1CF	100	95.286	Panthera_tigris_altaica
ENSCJAG00000005045	A1CF	100	98.655	ENSPTRG00000002508	A1CF	100	98.655	Pan_troglodytes
ENSCJAG00000005045	A1CF	100	97.475	ENSPANG00000021988	A1CF	100	97.475	Papio_anubis
ENSCJAG00000005045	A1CF	100	80.333	ENSPKIG00000025176	a1cf	100	80.333	Paramormyrops_kingsleyae
ENSCJAG00000005045	A1CF	100	87.395	ENSPSIG00000010318	A1CF	100	87.395	Pelodiscus_sinensis
ENSCJAG00000005045	A1CF	88	71.238	ENSPMGG00000013359	a1cf	99	67.061	Periophthalmus_magnuspinnatus
ENSCJAG00000005045	A1CF	100	95.126	ENSPEMG00000015021	A1cf	100	95.126	Peromyscus_maniculatus_bairdii
ENSCJAG00000005045	A1CF	100	89.916	ENSPCIG00000002175	A1CF	100	89.916	Phascolarctos_cinereus
ENSCJAG00000005045	A1CF	100	76.221	ENSPFOG00000007437	-	100	78.013	Poecilia_formosa
ENSCJAG00000005045	A1CF	100	76.384	ENSPFOG00000006683	a1cf	100	78.176	Poecilia_formosa
ENSCJAG00000005045	A1CF	100	75.081	ENSPLAG00000000026	a1cf	100	76.873	Poecilia_latipinna
ENSCJAG00000005045	A1CF	100	75.081	ENSPLAG00000001210	-	100	76.873	Poecilia_latipinna
ENSCJAG00000005045	A1CF	100	67.484	ENSPMEG00000000921	a1cf	100	69.281	Poecilia_mexicana
ENSCJAG00000005045	A1CF	100	68.627	ENSPMEG00000015529	-	100	70.425	Poecilia_mexicana
ENSCJAG00000005045	A1CF	100	76.384	ENSPREG00000016298	a1cf	100	77.850	Poecilia_reticulata
ENSCJAG00000005045	A1CF	100	97.983	ENSPPYG00000002819	A1CF	100	97.983	Pongo_abelii
ENSCJAG00000005045	A1CF	79	73.941	ENSPCAG00000006463	A1CF	79	73.941	Procavia_capensis
ENSCJAG00000005045	A1CF	100	96.980	ENSPCOG00000024172	A1CF	100	96.980	Propithecus_coquereli
ENSCJAG00000005045	A1CF	100	75.856	ENSPNYG00000017944	a1cf	100	77.814	Pundamilia_nyererei
ENSCJAG00000005045	A1CF	100	79.967	ENSPNAG00000007704	a1cf	100	79.967	Pygocentrus_nattereri
ENSCJAG00000005045	A1CF	100	92.605	ENSRNOG00000033195	A1cf	100	92.941	Rattus_norvegicus
ENSCJAG00000005045	A1CF	100	92.114	ENSRBIG00000042892	A1CF	100	95.882	Rhinopithecus_bieti
ENSCJAG00000005045	A1CF	100	98.822	ENSRROG00000041398	A1CF	100	98.822	Rhinopithecus_roxellana
ENSCJAG00000005045	A1CF	100	99.328	ENSSBOG00000021930	A1CF	100	99.328	Saimiri_boliviensis_boliviensis
ENSCJAG00000005045	A1CF	100	89.916	ENSSHAG00000005096	A1CF	100	89.916	Sarcophilus_harrisii
ENSCJAG00000005045	A1CF	100	78.939	ENSSFOG00015011774	a1cf	100	79.104	Scleropages_formosus
ENSCJAG00000005045	A1CF	100	75.570	ENSSMAG00000013271	a1cf	100	75.896	Scophthalmus_maximus
ENSCJAG00000005045	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.446	Seriola_dumerili
ENSCJAG00000005045	A1CF	100	69.637	ENSSLDG00000004290	a1cf	100	70.297	Seriola_lalandi_dorsalis
ENSCJAG00000005045	A1CF	95	84.276	ENSSARG00000005940	A1CF	96	84.629	Sorex_araneus
ENSCJAG00000005045	A1CF	95	87.852	ENSSPUG00000006797	A1CF	95	87.522	Sphenodon_punctatus
ENSCJAG00000005045	A1CF	100	96.471	ENSSSCG00000010431	A1CF	100	96.471	Sus_scrofa
ENSCJAG00000005045	A1CF	100	87.625	ENSTGUG00000005090	A1CF	100	86.899	Taeniopygia_guttata
ENSCJAG00000005045	A1CF	100	74.551	ENSTRUG00000001982	a1cf	100	74.878	Takifugu_rubripes
ENSCJAG00000005045	A1CF	100	75.447	ENSTNIG00000003580	a1cf	100	75.447	Tetraodon_nigroviridis
ENSCJAG00000005045	A1CF	97	87.522	ENSTTRG00000013190	A1CF	95	87.868	Tursiops_truncatus
ENSCJAG00000005045	A1CF	100	94.781	ENSUAMG00000020065	A1CF	100	94.781	Ursus_americanus
ENSCJAG00000005045	A1CF	100	95.623	ENSUMAG00000011162	A1CF	100	95.791	Ursus_maritimus
ENSCJAG00000005045	A1CF	87	90.019	ENSVPAG00000006130	A1CF	86	90.019	Vicugna_pacos
ENSCJAG00000005045	A1CF	100	94.613	ENSVVUG00000002504	A1CF	100	94.613	Vulpes_vulpes
ENSCJAG00000005045	A1CF	100	79.132	ENSXETG00000006611	a1cf	100	78.965	Xenopus_tropicalis
ENSCJAG00000005045	A1CF	100	76.393	ENSXCOG00000003302	a1cf	100	77.705	Xiphophorus_couchianus
ENSCJAG00000005045	A1CF	100	77.541	ENSXMAG00000016703	a1cf	100	78.852	Xiphophorus_maculatus