EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000005135 (Gene tree)
Gene ID: 100399275
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 79629 bases
Position: chrNTIC01013335.1:11451903-11531531
Accession: 100399275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000009539	EST1	PF10374.9	1e-24	1	1
ENSCJAP00000047343	EST1	PF10374.9	1e-24	1	1
ENSCJAP00000043658	EST1	PF10374.9	1e-24	1	1
ENSCJAP00000009554	EST1	PF10374.9	1e-24	1	1
ENSCJAP00000042448	EST1	PF10374.9	1.1e-24	1	1
ENSCJAP00000061719	EST1	PF10374.9	2.6e-22	1	1
ENSCJAP00000009539	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSCJAP00000047343	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSCJAP00000043658	EST1_DNA_bind	PF10373.9	1.5e-55	1	1
ENSCJAP00000009554	EST1_DNA_bind	PF10373.9	1.5e-55	1	1
ENSCJAP00000042448	EST1_DNA_bind	PF10373.9	1.5e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000068361	SMG7-207	219	-	ENSCJAP00000057694	73 (aa)	-	A0A2R8N1T5
ENSCJAT00000061694	SMG7-204	3529	-	ENSCJAP00000047343	1165 (aa)	XP_017821502	F7HX25
ENSCJAT00000010098	SMG7-201	3531	-	ENSCJAP00000009554	1176 (aa)	-	F7HCX4
ENSCJAT00000060825	SMG7-203	3507	-	ENSCJAP00000043658	1168 (aa)	-	F7I7R1
ENSCJAT00000061397	SMG7-205	3558	-	ENSCJAP00000042448	1185 (aa)	-	F7A748
ENSCJAT00000079397	SMG7-206	552	-	ENSCJAP00000061719	183 (aa)	-	A0A2R8PE15
ENSCJAT00000010081	SMG7-202	3411	-	ENSCJAP00000009539	1136 (aa)	XP_002760326	F7HI83

Gene Model

Click here to download ENSCJAG00000005135's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000005135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000005135	SMG7	100	98.370	ENSG00000116698	SMG7	99	100.000	Homo_sapiens
ENSCJAG00000005135	SMG7	90	90.244	ENSAPOG00000009611	smg7	95	74.281	Acanthochromis_polyacanthus
ENSCJAG00000005135	SMG7	99	96.634	ENSAMEG00000002357	SMG7	100	96.594	Ailuropoda_melanoleuca
ENSCJAG00000005135	SMG7	70	94.574	ENSACIG00000015152	smg7	97	67.580	Amphilophus_citrinellus
ENSCJAG00000005135	SMG7	85	94.194	ENSAOCG00000013538	smg7	99	66.354	Amphiprion_ocellaris
ENSCJAG00000005135	SMG7	85	94.194	ENSAPEG00000007851	smg7	99	66.355	Amphiprion_percula
ENSCJAG00000005135	SMG7	89	91.975	ENSATEG00000006931	smg7	99	66.043	Anabas_testudineus
ENSCJAG00000005135	SMG7	100	88.967	ENSAPLG00000015811	SMG7	100	88.967	Anas_platyrhynchos
ENSCJAG00000005135	SMG7	99	87.364	ENSACAG00000014989	SMG7	99	87.866	Anolis_carolinensis
ENSCJAG00000005135	SMG7	100	98.768	ENSANAG00000028114	SMG7	100	98.768	Aotus_nancymaae
ENSCJAG00000005135	SMG7	89	91.358	ENSACLG00000022079	smg7	99	65.952	Astatotilapia_calliptera
ENSCJAG00000005135	SMG7	87	91.875	ENSAMXG00000020809	smg7	99	67.854	Astyanax_mexicanus
ENSCJAG00000005135	SMG7	100	96.055	ENSBTAG00000008003	SMG7	100	95.778	Bos_taurus
ENSCJAG00000005135	SMG7	100	97.084	ENSCAFG00000013276	SMG7	99	97.089	Canis_familiaris
ENSCJAG00000005135	SMG7	100	97.084	ENSCAFG00020015475	SMG7	99	97.089	Canis_lupus_dingo
ENSCJAG00000005135	SMG7	97	96.117	ENSCHIG00000018192	SMG7	99	96.117	Capra_hircus
ENSCJAG00000005135	SMG7	100	97.186	ENSTSYG00000002667	SMG7	100	97.186	Carlito_syrichta
ENSCJAG00000005135	SMG7	100	97.170	ENSCPOG00000008906	SMG7	100	97.170	Cavia_porcellus
ENSCJAG00000005135	SMG7	100	99.120	ENSCCAG00000028596	SMG7	100	99.126	Cebus_capucinus
ENSCJAG00000005135	SMG7	100	98.542	ENSCATG00000011063	SMG7	100	98.515	Cercocebus_atys
ENSCJAG00000005135	SMG7	100	96.827	ENSCLAG00000010751	SMG7	100	96.780	Chinchilla_lanigera
ENSCJAG00000005135	SMG7	100	98.456	ENSCSAG00000012654	SMG7	99	98.459	Chlorocebus_sabaeus
ENSCJAG00000005135	SMG7	95	87.556	ENSCHOG00000010522	SMG7	99	87.914	Choloepus_hoffmanni
ENSCJAG00000005135	SMG7	100	91.674	ENSCPBG00000015724	SMG7	100	91.674	Chrysemys_picta_bellii
ENSCJAG00000005135	SMG7	87	51.497	ENSCING00000006953	-	96	53.376	Ciona_intestinalis
ENSCJAG00000005135	SMG7	99	98.404	ENSCANG00000015680	SMG7	100	98.428	Colobus_angolensis_palliatus
ENSCJAG00000005135	SMG7	100	95.712	ENSCGRG00001013705	Smg7	100	95.712	Cricetulus_griseus_chok1gshd
ENSCJAG00000005135	SMG7	99	95.648	ENSCGRG00000018401	Smg7	100	95.648	Cricetulus_griseus_crigri
ENSCJAG00000005135	SMG7	85	89.744	ENSCSEG00000007392	-	90	88.125	Cynoglossus_semilaevis
ENSCJAG00000005135	SMG7	81	88.000	ENSCVAG00000011842	smg7	98	69.500	Cyprinodon_variegatus
ENSCJAG00000005135	SMG7	85	94.839	ENSDARG00000060767	smg7	99	67.502	Danio_rerio
ENSCJAG00000005135	SMG7	99	95.997	ENSDORG00000007331	Smg7	100	95.997	Dipodomys_ordii
ENSCJAG00000005135	SMG7	94	96.105	ENSETEG00000002654	SMG7	100	96.105	Echinops_telfairi
ENSCJAG00000005135	SMG7	100	97.341	ENSEASG00005006524	SMG7	99	97.346	Equus_asinus_asinus
ENSCJAG00000005135	SMG7	100	97.427	ENSECAG00000004313	SMG7	99	97.432	Equus_caballus
ENSCJAG00000005135	SMG7	100	92.954	ENSEEUG00000002024	SMG7	100	92.954	Erinaceus_europaeus
ENSCJAG00000005135	SMG7	87	93.125	ENSELUG00000010293	smg7	99	66.284	Esox_lucius
ENSCJAG00000005135	SMG7	100	97.170	ENSFCAG00000010900	SMG7	99	97.329	Felis_catus
ENSCJAG00000005135	SMG7	99	85.872	ENSFALG00000003047	SMG7	100	86.298	Ficedula_albicollis
ENSCJAG00000005135	SMG7	97	96.817	ENSFDAG00000012121	SMG7	99	96.702	Fukomys_damarensis
ENSCJAG00000005135	SMG7	86	89.809	ENSFHEG00000011073	smg7	99	64.024	Fundulus_heteroclitus
ENSCJAG00000005135	SMG7	86	90.446	ENSGMOG00000004916	smg7	88	74.102	Gadus_morhua
ENSCJAG00000005135	SMG7	100	88.976	ENSGALG00000004667	SMG7	100	89.326	Gallus_gallus
ENSCJAG00000005135	SMG7	98	84.153	ENSGAFG00000019000	smg7	99	64.286	Gambusia_affinis
ENSCJAG00000005135	SMG7	86	91.720	ENSGACG00000001634	smg7	99	64.680	Gasterosteus_aculeatus
ENSCJAG00000005135	SMG7	97	87.845	ENSGAGG00000024208	-	88	93.939	Gopherus_agassizii
ENSCJAG00000005135	SMG7	100	98.285	ENSGGOG00000002342	SMG7	100	98.253	Gorilla_gorilla
ENSCJAG00000005135	SMG7	90	90.244	ENSHBUG00000003726	smg7	96	72.589	Haplochromis_burtoni
ENSCJAG00000005135	SMG7	100	96.746	ENSHGLG00000009353	SMG7	100	96.791	Heterocephalus_glaber_female
ENSCJAG00000005135	SMG7	100	96.834	ENSHGLG00100009637	-	100	96.834	Heterocephalus_glaber_male
ENSCJAG00000005135	SMG7	97	88.879	ENSHGLG00100004878	-	99	88.879	Heterocephalus_glaber_male
ENSCJAG00000005135	SMG7	96	79.096	ENSHCOG00000012804	-	89	84.337	Hippocampus_comes
ENSCJAG00000005135	SMG7	85	94.194	ENSIPUG00000016997	smg7	99	67.976	Ictalurus_punctatus
ENSCJAG00000005135	SMG7	99	97.737	ENSSTOG00000000401	SMG7	100	97.737	Ictidomys_tridecemlineatus
ENSCJAG00000005135	SMG7	97	95.318	ENSJJAG00000012351	Smg7	99	95.318	Jaculus_jaculus
ENSCJAG00000005135	SMG7	97	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSCJAG00000005135	SMG7	72	93.182	ENSKMAG00000004900	smg7	96	70.500	Kryptolebias_marmoratus
ENSCJAG00000005135	SMG7	87	91.250	ENSLBEG00000002983	smg7	99	66.149	Labrus_bergylta
ENSCJAG00000005135	SMG7	52	62.500	ENSLBEG00000005220	-	75	64.098	Labrus_bergylta
ENSCJAG00000005135	SMG7	89	93.210	ENSLACG00000000972	SMG7	99	75.847	Latimeria_chalumnae
ENSCJAG00000005135	SMG7	88	93.789	ENSLOCG00000002010	smg7	99	70.241	Lepisosteus_oculatus
ENSCJAG00000005135	SMG7	99	96.954	ENSLAFG00000008186	SMG7	100	96.954	Loxodonta_africana
ENSCJAG00000005135	SMG7	100	98.456	ENSMFAG00000031653	SMG7	100	98.428	Macaca_fascicularis
ENSCJAG00000005135	SMG7	100	98.542	ENSMMUG00000018458	SMG7	100	97.878	Macaca_mulatta
ENSCJAG00000005135	SMG7	100	98.505	ENSMNEG00000034798	SMG7	100	98.515	Macaca_nemestrina
ENSCJAG00000005135	SMG7	100	98.542	ENSMLEG00000037170	SMG7	100	98.515	Mandrillus_leucophaeus
ENSCJAG00000005135	SMG7	86	92.357	ENSMAMG00000018733	smg7	85	65.205	Mastacembelus_armatus
ENSCJAG00000005135	SMG7	89	91.358	ENSMZEG00005015247	smg7	99	65.952	Maylandia_zebra
ENSCJAG00000005135	SMG7	97	88.669	ENSMGAG00000001561	SMG7	98	89.119	Meleagris_gallopavo
ENSCJAG00000005135	SMG7	99	96.084	ENSMAUG00000019484	Smg7	100	96.084	Mesocricetus_auratus
ENSCJAG00000005135	SMG7	100	97.977	ENSMICG00000007145	SMG7	100	97.977	Microcebus_murinus
ENSCJAG00000005135	SMG7	99	95.909	ENSMOCG00000020748	Smg7	100	95.909	Microtus_ochrogaster
ENSCJAG00000005135	SMG7	89	89.506	ENSMMOG00000001524	smg7	99	64.533	Mola_mola
ENSCJAG00000005135	SMG7	92	92.979	ENSMODG00000007139	SMG7	99	92.979	Monodelphis_domestica
ENSCJAG00000005135	SMG7	86	92.994	ENSMALG00000000061	smg7	93	69.652	Monopterus_albus
ENSCJAG00000005135	SMG7	99	95.648	MGP_CAROLIEiJ_G0014704	Smg7	100	95.387	Mus_caroli
ENSCJAG00000005135	SMG7	99	95.561	ENSMUSG00000042772	Smg7	100	95.561	Mus_musculus
ENSCJAG00000005135	SMG7	99	95.735	MGP_PahariEiJ_G0027940	Smg7	100	95.735	Mus_pahari
ENSCJAG00000005135	SMG7	99	95.648	MGP_SPRETEiJ_G0015511	Smg7	100	95.648	Mus_spretus
ENSCJAG00000005135	SMG7	96	96.970	ENSMPUG00000011732	SMG7	97	96.970	Mustela_putorius_furo
ENSCJAG00000005135	SMG7	97	96.293	ENSMLUG00000015417	SMG7	99	96.293	Myotis_lucifugus
ENSCJAG00000005135	SMG7	100	95.954	ENSNGAG00000009836	Smg7	100	96.258	Nannospalax_galili
ENSCJAG00000005135	SMG7	98	60.923	ENSNBRG00000024343	smg7	96	70.476	Neolamprologus_brichardi
ENSCJAG00000005135	SMG7	100	98.542	ENSNLEG00000018018	SMG7	100	98.515	Nomascus_leucogenys
ENSCJAG00000005135	SMG7	81	86.421	ENSMEUG00000004681	SMG7	82	86.611	Notamacropus_eugenii
ENSCJAG00000005135	SMG7	86	96.178	ENSOPRG00000013942	SMG7	96	84.384	Ochotona_princeps
ENSCJAG00000005135	SMG7	100	96.746	ENSODEG00000010390	SMG7	100	96.867	Octodon_degus
ENSCJAG00000005135	SMG7	85	94.194	ENSONIG00000000277	smg7	99	65.497	Oreochromis_niloticus
ENSCJAG00000005135	SMG7	96	91.135	ENSOANG00000000994	SMG7	100	91.223	Ornithorhynchus_anatinus
ENSCJAG00000005135	SMG7	100	89.708	ENSOCUG00000005887	SMG7	95	89.880	Oryctolagus_cuniculus
ENSCJAG00000005135	SMG7	98	84.444	ENSORLG00000007314	smg7	81	84.444	Oryzias_latipes
ENSCJAG00000005135	SMG7	87	91.250	ENSORLG00020015779	smg7	82	83.607	Oryzias_latipes_hni
ENSCJAG00000005135	SMG7	90	89.091	ENSORLG00015012289	smg7	99	63.488	Oryzias_latipes_hsok
ENSCJAG00000005135	SMG7	89	88.889	ENSOMEG00000002328	smg7	99	63.366	Oryzias_melastigma
ENSCJAG00000005135	SMG7	99	93.713	ENSOGAG00000003107	SMG7	100	93.628	Otolemur_garnettii
ENSCJAG00000005135	SMG7	100	95.969	ENSOARG00000001352	SMG7	99	95.976	Ovis_aries
ENSCJAG00000005135	SMG7	100	98.505	ENSPPAG00000031619	SMG7	100	98.515	Pan_paniscus
ENSCJAG00000005135	SMG7	100	97.449	ENSPPRG00000011222	SMG7	100	97.449	Panthera_pardus
ENSCJAG00000005135	SMG7	97	97.380	ENSPTIG00000007242	SMG7	100	97.380	Panthera_tigris_altaica
ENSCJAG00000005135	SMG7	100	98.505	ENSPTRG00000001764	SMG7	100	98.515	Pan_troglodytes
ENSCJAG00000005135	SMG7	100	98.542	ENSPANG00000004520	SMG7	100	98.505	Papio_anubis
ENSCJAG00000005135	SMG7	89	89.571	ENSPKIG00000007242	smg7	99	68.317	Paramormyrops_kingsleyae
ENSCJAG00000005135	SMG7	97	91.821	ENSPSIG00000012201	SMG7	99	91.733	Pelodiscus_sinensis
ENSCJAG00000005135	SMG7	89	84.568	ENSPMGG00000002179	-	92	82.635	Periophthalmus_magnuspinnatus
ENSCJAG00000005135	SMG7	57	59.896	ENSPMGG00000021833	smg7	79	71.681	Periophthalmus_magnuspinnatus
ENSCJAG00000005135	SMG7	99	94.778	ENSPEMG00000011315	Smg7	100	94.778	Peromyscus_maniculatus_bairdii
ENSCJAG00000005135	SMG7	100	93.322	ENSPCIG00000003786	SMG7	100	93.322	Phascolarctos_cinereus
ENSCJAG00000005135	SMG7	85	91.613	ENSPFOG00000019219	smg7	99	64.115	Poecilia_formosa
ENSCJAG00000005135	SMG7	86	90.446	ENSPLAG00000001446	smg7	99	64.402	Poecilia_latipinna
ENSCJAG00000005135	SMG7	86	90.446	ENSPMEG00000005218	smg7	99	63.677	Poecilia_mexicana
ENSCJAG00000005135	SMG7	86	89.809	ENSPREG00000019039	smg7	92	61.466	Poecilia_reticulata
ENSCJAG00000005135	SMG7	100	98.593	ENSPPYG00000000427	SMG7	100	98.593	Pongo_abelii
ENSCJAG00000005135	SMG7	98	83.578	ENSPCAG00000008360	SMG7	100	83.578	Procavia_capensis
ENSCJAG00000005135	SMG7	100	97.856	ENSPCOG00000011996	SMG7	99	97.860	Propithecus_coquereli
ENSCJAG00000005135	SMG7	99	85.532	ENSPVAG00000000851	SMG7	100	85.532	Pteropus_vampyrus
ENSCJAG00000005135	SMG7	89	91.358	ENSPNYG00000007643	smg7	99	65.722	Pundamilia_nyererei
ENSCJAG00000005135	SMG7	87	93.711	ENSPNAG00000011374	smg7	98	72.222	Pygocentrus_nattereri
ENSCJAG00000005135	SMG7	100	95.458	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSCJAG00000005135	SMG7	100	98.456	ENSRBIG00000036316	SMG7	100	98.428	Rhinopithecus_bieti
ENSCJAG00000005135	SMG7	100	98.456	ENSRROG00000035719	SMG7	100	98.428	Rhinopithecus_roxellana
ENSCJAG00000005135	SMG7	97	99.038	ENSSBOG00000023454	SMG7	100	99.038	Saimiri_boliviensis_boliviensis
ENSCJAG00000005135	SMG7	100	92.801	ENSSHAG00000013147	SMG7	100	92.801	Sarcophilus_harrisii
ENSCJAG00000005135	SMG7	85	92.903	ENSSFOG00015017252	smg7	99	75.263	Scleropages_formosus
ENSCJAG00000005135	SMG7	86	92.994	ENSSMAG00000006067	smg7	99	65.862	Scophthalmus_maximus
ENSCJAG00000005135	SMG7	90	90.244	ENSSDUG00000017543	smg7	99	65.690	Seriola_dumerili
ENSCJAG00000005135	SMG7	86	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSCJAG00000005135	SMG7	99	90.371	ENSSPUG00000002064	SMG7	99	90.371	Sphenodon_punctatus
ENSCJAG00000005135	SMG7	77	94.326	ENSSPAG00000008733	smg7	100	65.464	Stegastes_partitus
ENSCJAG00000005135	SMG7	100	97.084	ENSSSCG00000015558	SMG7	99	97.087	Sus_scrofa
ENSCJAG00000005135	SMG7	99	88.801	ENSTGUG00000003928	SMG7	100	89.242	Taeniopygia_guttata
ENSCJAG00000005135	SMG7	95	83.333	ENSTRUG00000003612	-	95	83.333	Takifugu_rubripes
ENSCJAG00000005135	SMG7	85	89.103	ENSTNIG00000002802	smg7	99	63.889	Tetraodon_nigroviridis
ENSCJAG00000005135	SMG7	78	96.186	ENSTBEG00000003220	SMG7	81	93.562	Tupaia_belangeri
ENSCJAG00000005135	SMG7	99	95.047	ENSTTRG00000014778	SMG7	100	95.474	Tursiops_truncatus
ENSCJAG00000005135	SMG7	96	93.059	ENSUAMG00000017473	SMG7	100	93.059	Ursus_americanus
ENSCJAG00000005135	SMG7	94	97.088	ENSUMAG00000016389	SMG7	100	97.088	Ursus_maritimus
ENSCJAG00000005135	SMG7	100	97.170	ENSVVUG00000008976	SMG7	99	97.213	Vulpes_vulpes
ENSCJAG00000005135	SMG7	89	88.889	ENSXETG00000012528	smg7	100	71.057	Xenopus_tropicalis
ENSCJAG00000005135	SMG7	85	92.258	ENSXMAG00000007123	smg7	99	64.366	Xiphophorus_maculatus