EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCJAG00000005393 (Gene tree)
Gene ID: 100387101
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 15815 bases
Position: chrNTIC01034389.1:24780793-24796607
Accession: 100387101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000045531	HAT	PF02184.16	6.9e-43	1	2
ENSCJAP00000045531	HAT	PF02184.16	6.9e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000060073	CRNKL1-201	2064	XM_002747484	ENSCJAP00000045531	687 (aa)	XP_002747530	F6T4W4

Gene Model

Click here to download ENSCJAG00000005393's gene model file

Pathways

Pathway ID	Pathway Name	Source
cjc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000005393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000005393	CRNKL1	100	99.127	ENSG00000101343	CRNKL1	100	99.127	Homo_sapiens
ENSCJAG00000005393	CRNKL1	99	86.131	ENSAPOG00000009705	crnkl1	97	86.478	Acanthochromis_polyacanthus
ENSCJAG00000005393	CRNKL1	100	97.234	ENSAMEG00000000270	CRNKL1	83	97.234	Ailuropoda_melanoleuca
ENSCJAG00000005393	CRNKL1	97	86.787	ENSACIG00000015267	crnkl1	89	86.787	Amphilophus_citrinellus
ENSCJAG00000005393	CRNKL1	99	86.277	ENSAOCG00000021964	crnkl1	91	86.277	Amphiprion_ocellaris
ENSCJAG00000005393	CRNKL1	99	86.131	ENSAPEG00000015041	crnkl1	91	86.131	Amphiprion_percula
ENSCJAG00000005393	CRNKL1	99	85.882	ENSATEG00000001068	crnkl1	89	85.882	Anabas_testudineus
ENSCJAG00000005393	CRNKL1	99	90.247	ENSAPLG00000013105	CRNKL1	99	90.247	Anas_platyrhynchos
ENSCJAG00000005393	CRNKL1	99	92.533	ENSACAG00000005284	CRNKL1	99	92.533	Anolis_carolinensis
ENSCJAG00000005393	CRNKL1	92	99.842	ENSANAG00000024889	CRNKL1	100	99.842	Aotus_nancymaae
ENSCJAG00000005393	CRNKL1	99	87.297	ENSACLG00000010813	crnkl1	90	87.297	Astatotilapia_calliptera
ENSCJAG00000005393	CRNKL1	97	87.500	ENSAMXG00000018334	crnkl1	92	86.277	Astyanax_mexicanus
ENSCJAG00000005393	CRNKL1	100	96.652	ENSBTAG00000008472	CRNKL1	99	96.652	Bos_taurus
ENSCJAG00000005393	CRNKL1	93	62.986	WBGene00019762	M03F8.3	90	62.500	Caenorhabditis_elegans
ENSCJAG00000005393	CRNKL1	100	96.943	ENSCAFG00000005333	CRNKL1	94	96.943	Canis_familiaris
ENSCJAG00000005393	CRNKL1	100	96.943	ENSCAFG00020027488	CRNKL1	100	96.943	Canis_lupus_dingo
ENSCJAG00000005393	CRNKL1	100	95.488	ENSCHIG00000013171	CRNKL1	99	95.488	Capra_hircus
ENSCJAG00000005393	CRNKL1	100	98.253	ENSTSYG00000004197	CRNKL1	100	98.253	Carlito_syrichta
ENSCJAG00000005393	CRNKL1	95	94.992	ENSCAPG00000010501	CRNKL1	99	94.992	Cavia_aperea
ENSCJAG00000005393	CRNKL1	100	95.342	ENSCPOG00000004418	CRNKL1	100	95.342	Cavia_porcellus
ENSCJAG00000005393	CRNKL1	100	99.709	ENSCCAG00000027037	CRNKL1	100	99.709	Cebus_capucinus
ENSCJAG00000005393	CRNKL1	100	99.418	ENSCATG00000034247	CRNKL1	100	99.418	Cercocebus_atys
ENSCJAG00000005393	CRNKL1	100	95.779	ENSCLAG00000013859	CRNKL1	100	95.779	Chinchilla_lanigera
ENSCJAG00000005393	CRNKL1	100	99.418	ENSCSAG00000011434	CRNKL1	100	99.418	Chlorocebus_sabaeus
ENSCJAG00000005393	CRNKL1	100	96.361	ENSCHOG00000006371	CRNKL1	84	96.361	Choloepus_hoffmanni
ENSCJAG00000005393	CRNKL1	99	92.847	ENSCPBG00000023501	CRNKL1	99	92.847	Chrysemys_picta_bellii
ENSCJAG00000005393	CRNKL1	96	69.789	ENSCING00000002709	-	99	68.421	Ciona_intestinalis
ENSCJAG00000005393	CRNKL1	100	99.272	ENSCANG00000038789	CRNKL1	100	99.272	Colobus_angolensis_palliatus
ENSCJAG00000005393	CRNKL1	100	96.215	ENSCGRG00001001115	-	99	96.215	Cricetulus_griseus_chok1gshd
ENSCJAG00000005393	CRNKL1	100	96.215	ENSCGRG00001000687	-	99	96.215	Cricetulus_griseus_chok1gshd
ENSCJAG00000005393	CRNKL1	100	96.215	ENSCGRG00000007854	Crnkl1	99	96.215	Cricetulus_griseus_crigri
ENSCJAG00000005393	CRNKL1	98	86.310	ENSCSEG00000005594	crnkl1	85	86.310	Cynoglossus_semilaevis
ENSCJAG00000005393	CRNKL1	97	86.937	ENSCVAG00000015172	crnkl1	92	85.109	Cyprinodon_variegatus
ENSCJAG00000005393	CRNKL1	96	86.858	ENSDARG00000007901	crnkl1	91	85.234	Danio_rerio
ENSCJAG00000005393	CRNKL1	99	96.637	ENSDNOG00000016226	CRNKL1	95	96.637	Dasypus_novemcinctus
ENSCJAG00000005393	CRNKL1	100	94.517	ENSDORG00000000394	-	100	94.517	Dipodomys_ordii
ENSCJAG00000005393	CRNKL1	97	87.463	ENSDORG00000023724	-	99	87.463	Dipodomys_ordii
ENSCJAG00000005393	CRNKL1	97	87.015	ENSDORG00000030174	-	99	87.015	Dipodomys_ordii
ENSCJAG00000005393	CRNKL1	97	69.083	FBgn0000377	crn	97	68.567	Drosophila_melanogaster
ENSCJAG00000005393	CRNKL1	100	83.988	ENSETEG00000003711	CRNKL1	84	83.988	Echinops_telfairi
ENSCJAG00000005393	CRNKL1	99	58.396	ENSEBUG00000013461	crnkl1	96	58.126	Eptatretus_burgeri
ENSCJAG00000005393	CRNKL1	100	96.943	ENSEASG00005002072	CRNKL1	100	96.943	Equus_asinus_asinus
ENSCJAG00000005393	CRNKL1	100	96.943	ENSECAG00000022215	CRNKL1	100	96.943	Equus_caballus
ENSCJAG00000005393	CRNKL1	99	93.824	ENSEEUG00000000413	CRNKL1	92	93.886	Erinaceus_europaeus
ENSCJAG00000005393	CRNKL1	97	85.629	ENSELUG00000015424	crnkl1	97	84.649	Esox_lucius
ENSCJAG00000005393	CRNKL1	100	97.234	ENSFCAG00000000714	CRNKL1	100	97.234	Felis_catus
ENSCJAG00000005393	CRNKL1	98	91.518	ENSFALG00000004611	CRNKL1	100	91.518	Ficedula_albicollis
ENSCJAG00000005393	CRNKL1	100	95.488	ENSFDAG00000000604	CRNKL1	100	95.488	Fukomys_damarensis
ENSCJAG00000005393	CRNKL1	98	86.330	ENSFHEG00000013163	crnkl1	88	86.330	Fundulus_heteroclitus
ENSCJAG00000005393	CRNKL1	97	85.778	ENSGMOG00000007609	crnkl1	94	84.457	Gadus_morhua
ENSCJAG00000005393	CRNKL1	99	93.285	ENSGALG00000008429	CRNKL1	99	93.285	Gallus_gallus
ENSCJAG00000005393	CRNKL1	97	86.486	ENSGAFG00000014249	crnkl1	91	84.470	Gambusia_affinis
ENSCJAG00000005393	CRNKL1	99	84.571	ENSGACG00000011852	crnkl1	92	84.571	Gasterosteus_aculeatus
ENSCJAG00000005393	CRNKL1	95	91.616	ENSGAGG00000021233	CRNKL1	100	91.667	Gopherus_agassizii
ENSCJAG00000005393	CRNKL1	100	99.127	ENSGGOG00000014176	CRNKL1	100	99.127	Gorilla_gorilla
ENSCJAG00000005393	CRNKL1	99	87.149	ENSHBUG00000005246	crnkl1	90	87.149	Haplochromis_burtoni
ENSCJAG00000005393	CRNKL1	100	95.633	ENSHGLG00000010856	CRNKL1	100	95.633	Heterocephalus_glaber_female
ENSCJAG00000005393	CRNKL1	100	95.633	ENSHGLG00100011521	CRNKL1	100	95.633	Heterocephalus_glaber_male
ENSCJAG00000005393	CRNKL1	97	84.408	ENSHCOG00000006420	crnkl1	98	82.991	Hippocampus_comes
ENSCJAG00000005393	CRNKL1	94	87.057	ENSIPUG00000006751	crnkl1	93	85.373	Ictalurus_punctatus
ENSCJAG00000005393	CRNKL1	93	68.760	ENSIPUG00000000315	-	100	69.969	Ictalurus_punctatus
ENSCJAG00000005393	CRNKL1	97	75.489	ENSIPUG00000006836	-	98	75.261	Ictalurus_punctatus
ENSCJAG00000005393	CRNKL1	100	96.943	ENSSTOG00000014747	CRNKL1	100	96.943	Ictidomys_tridecemlineatus
ENSCJAG00000005393	CRNKL1	100	94.452	ENSJJAG00000016926	Crnkl1	100	94.452	Jaculus_jaculus
ENSCJAG00000005393	CRNKL1	98	86.667	ENSKMAG00000003620	crnkl1	86	86.667	Kryptolebias_marmoratus
ENSCJAG00000005393	CRNKL1	97	71.174	ENSLBEG00000003543	crnkl1	93	70.827	Labrus_bergylta
ENSCJAG00000005393	CRNKL1	99	87.737	ENSLACG00000001129	CRNKL1	99	87.737	Latimeria_chalumnae
ENSCJAG00000005393	CRNKL1	97	88.705	ENSLOCG00000016889	crnkl1	94	87.740	Lepisosteus_oculatus
ENSCJAG00000005393	CRNKL1	100	96.948	ENSLAFG00000004512	CRNKL1	100	96.948	Loxodonta_africana
ENSCJAG00000005393	CRNKL1	100	99.418	ENSMFAG00000039893	CRNKL1	100	99.418	Macaca_fascicularis
ENSCJAG00000005393	CRNKL1	100	99.418	ENSMMUG00000007709	CRNKL1	100	99.418	Macaca_mulatta
ENSCJAG00000005393	CRNKL1	100	99.418	ENSMNEG00000037490	CRNKL1	100	99.418	Macaca_nemestrina
ENSCJAG00000005393	CRNKL1	100	99.418	ENSMLEG00000034885	CRNKL1	100	99.418	Mandrillus_leucophaeus
ENSCJAG00000005393	CRNKL1	99	85.547	ENSMAMG00000008757	crnkl1	89	86.905	Mastacembelus_armatus
ENSCJAG00000005393	CRNKL1	99	87.297	ENSMZEG00005022345	crnkl1	90	87.297	Maylandia_zebra
ENSCJAG00000005393	CRNKL1	99	92.566	ENSMGAG00000003452	CRNKL1	94	92.566	Meleagris_gallopavo
ENSCJAG00000005393	CRNKL1	100	96.070	ENSMAUG00000020764	Crnkl1	99	96.070	Mesocricetus_auratus
ENSCJAG00000005393	CRNKL1	100	98.544	ENSMICG00000006048	CRNKL1	100	98.544	Microcebus_murinus
ENSCJAG00000005393	CRNKL1	100	88.126	ENSMOCG00000000681	-	99	88.126	Microtus_ochrogaster
ENSCJAG00000005393	CRNKL1	97	69.670	ENSMOCG00000004179	-	98	68.850	Microtus_ochrogaster
ENSCJAG00000005393	CRNKL1	92	85.578	ENSMMOG00000017601	crnkl1	97	85.578	Mola_mola
ENSCJAG00000005393	CRNKL1	100	91.379	ENSMODG00000005961	-	99	91.379	Monodelphis_domestica
ENSCJAG00000005393	CRNKL1	100	86.317	ENSMODG00000010857	-	99	86.317	Monodelphis_domestica
ENSCJAG00000005393	CRNKL1	98	63.429	ENSMALG00000011211	crnkl1	88	63.353	Monopterus_albus
ENSCJAG00000005393	CRNKL1	100	96.215	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.215	Mus_caroli
ENSCJAG00000005393	CRNKL1	100	96.215	ENSMUSG00000001767	Crnkl1	99	96.215	Mus_musculus
ENSCJAG00000005393	CRNKL1	100	94.760	MGP_PahariEiJ_G0025838	Crnkl1	99	94.760	Mus_pahari
ENSCJAG00000005393	CRNKL1	100	96.070	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.070	Mus_spretus
ENSCJAG00000005393	CRNKL1	100	97.380	ENSMPUG00000001226	CRNKL1	100	97.380	Mustela_putorius_furo
ENSCJAG00000005393	CRNKL1	100	96.221	ENSMLUG00000016513	CRNKL1	89	96.221	Myotis_lucifugus
ENSCJAG00000005393	CRNKL1	100	94.429	ENSNGAG00000023097	Crnkl1	100	94.429	Nannospalax_galili
ENSCJAG00000005393	CRNKL1	99	87.445	ENSNBRG00000007867	crnkl1	89	87.445	Neolamprologus_brichardi
ENSCJAG00000005393	CRNKL1	100	95.779	ENSNLEG00000009862	CRNKL1	100	95.779	Nomascus_leucogenys
ENSCJAG00000005393	CRNKL1	98	94.328	ENSMEUG00000012167	-	100	94.328	Notamacropus_eugenii
ENSCJAG00000005393	CRNKL1	100	84.884	ENSMEUG00000002361	-	99	84.884	Notamacropus_eugenii
ENSCJAG00000005393	CRNKL1	75	66.795	ENSOPRG00000009242	-	61	66.795	Ochotona_princeps
ENSCJAG00000005393	CRNKL1	100	95.488	ENSODEG00000012175	CRNKL1	100	95.488	Octodon_degus
ENSCJAG00000005393	CRNKL1	99	87.740	ENSONIG00000018728	crnkl1	89	87.740	Oreochromis_niloticus
ENSCJAG00000005393	CRNKL1	99	96.210	ENSOCUG00000015484	CRNKL1	83	96.210	Oryctolagus_cuniculus
ENSCJAG00000005393	CRNKL1	97	85.435	ENSORLG00000017240	crnkl1	94	81.724	Oryzias_latipes
ENSCJAG00000005393	CRNKL1	99	83.796	ENSORLG00020001742	crnkl1	89	85.586	Oryzias_latipes_hni
ENSCJAG00000005393	CRNKL1	97	85.586	ENSORLG00015019564	crnkl1	89	85.586	Oryzias_latipes_hsok
ENSCJAG00000005393	CRNKL1	99	84.526	ENSOMEG00000019895	crnkl1	91	84.526	Oryzias_melastigma
ENSCJAG00000005393	CRNKL1	100	98.399	ENSOGAG00000011544	CRNKL1	100	98.399	Otolemur_garnettii
ENSCJAG00000005393	CRNKL1	100	96.652	ENSOARG00000002150	CRNKL1	89	96.652	Ovis_aries
ENSCJAG00000005393	CRNKL1	100	97.817	ENSPPAG00000027847	CRNKL1	83	97.817	Pan_paniscus
ENSCJAG00000005393	CRNKL1	100	97.234	ENSPPRG00000001955	CRNKL1	100	97.234	Panthera_pardus
ENSCJAG00000005393	CRNKL1	100	97.234	ENSPTIG00000007393	CRNKL1	100	97.234	Panthera_tigris_altaica
ENSCJAG00000005393	CRNKL1	100	98.981	ENSPTRG00000030609	CRNKL1	100	98.981	Pan_troglodytes
ENSCJAG00000005393	CRNKL1	100	99.418	ENSPANG00000017420	CRNKL1	100	99.418	Papio_anubis
ENSCJAG00000005393	CRNKL1	96	81.955	ENSPKIG00000017093	crnkl1	88	81.657	Paramormyrops_kingsleyae
ENSCJAG00000005393	CRNKL1	99	91.654	ENSPSIG00000012705	CRNKL1	99	91.654	Pelodiscus_sinensis
ENSCJAG00000005393	CRNKL1	99	79.118	ENSPMGG00000006263	crnkl1	96	79.118	Periophthalmus_magnuspinnatus
ENSCJAG00000005393	CRNKL1	100	96.361	ENSPEMG00000000073	-	99	96.361	Peromyscus_maniculatus_bairdii
ENSCJAG00000005393	CRNKL1	99	81.395	ENSPMAG00000002250	crnkl1	99	81.395	Petromyzon_marinus
ENSCJAG00000005393	CRNKL1	100	93.595	ENSPCIG00000025825	CRNKL1	96	93.595	Phascolarctos_cinereus
ENSCJAG00000005393	CRNKL1	97	86.336	ENSPFOG00000005102	crnkl1	94	84.370	Poecilia_formosa
ENSCJAG00000005393	CRNKL1	97	86.336	ENSPLAG00000007288	crnkl1	90	84.249	Poecilia_latipinna
ENSCJAG00000005393	CRNKL1	97	86.486	ENSPMEG00000008865	crnkl1	94	84.515	Poecilia_mexicana
ENSCJAG00000005393	CRNKL1	97	86.036	ENSPREG00000012615	crnkl1	92	84.357	Poecilia_reticulata
ENSCJAG00000005393	CRNKL1	100	99.127	ENSPPYG00000010747	CRNKL1	81	99.127	Pongo_abelii
ENSCJAG00000005393	CRNKL1	99	90.735	ENSPCAG00000003296	CRNKL1	85	90.830	Procavia_capensis
ENSCJAG00000005393	CRNKL1	100	97.234	ENSPCOG00000017608	CRNKL1	83	97.234	Propithecus_coquereli
ENSCJAG00000005393	CRNKL1	100	97.234	ENSPVAG00000006207	CRNKL1	83	97.234	Pteropus_vampyrus
ENSCJAG00000005393	CRNKL1	99	87.149	ENSPNYG00000001977	crnkl1	90	87.149	Pundamilia_nyererei
ENSCJAG00000005393	CRNKL1	98	88.060	ENSPNAG00000001507	crnkl1	98	83.406	Pygocentrus_nattereri
ENSCJAG00000005393	CRNKL1	100	96.215	ENSRNOG00000010587	Crnkl1	99	96.215	Rattus_norvegicus
ENSCJAG00000005393	CRNKL1	100	95.779	ENSRNOG00000040045	Crnkl1	99	95.779	Rattus_norvegicus
ENSCJAG00000005393	CRNKL1	100	99.272	ENSRBIG00000031770	CRNKL1	100	99.272	Rhinopithecus_bieti
ENSCJAG00000005393	CRNKL1	100	99.127	ENSRROG00000040450	CRNKL1	100	99.127	Rhinopithecus_roxellana
ENSCJAG00000005393	CRNKL1	94	37.536	YLR117C	CLF1	99	37.627	Saccharomyces_cerevisiae
ENSCJAG00000005393	CRNKL1	100	99.709	ENSSBOG00000029672	CRNKL1	100	99.709	Saimiri_boliviensis_boliviensis
ENSCJAG00000005393	CRNKL1	96	74.810	ENSSHAG00000011199	CRNKL1	99	74.810	Sarcophilus_harrisii
ENSCJAG00000005393	CRNKL1	96	87.009	ENSSFOG00015000946	crnkl1	89	85.234	Scleropages_formosus
ENSCJAG00000005393	CRNKL1	99	84.548	ENSSMAG00000007933	crnkl1	89	84.548	Scophthalmus_maximus
ENSCJAG00000005393	CRNKL1	99	79.009	ENSSDUG00000012625	crnkl1	87	79.794	Seriola_dumerili
ENSCJAG00000005393	CRNKL1	99	85.693	ENSSLDG00000021413	crnkl1	88	86.558	Seriola_lalandi_dorsalis
ENSCJAG00000005393	CRNKL1	100	96.215	ENSSARG00000006443	CRNKL1	82	96.215	Sorex_araneus
ENSCJAG00000005393	CRNKL1	99	92.094	ENSSPUG00000005254	CRNKL1	99	92.094	Sphenodon_punctatus
ENSCJAG00000005393	CRNKL1	99	85.985	ENSSPAG00000016150	crnkl1	89	85.985	Stegastes_partitus
ENSCJAG00000005393	CRNKL1	100	97.089	ENSSSCG00000038587	CRNKL1	99	97.089	Sus_scrofa
ENSCJAG00000005393	CRNKL1	99	91.691	ENSTGUG00000007645	CRNKL1	98	91.691	Taeniopygia_guttata
ENSCJAG00000005393	CRNKL1	98	80.448	ENSTRUG00000015417	crnkl1	90	79.823	Takifugu_rubripes
ENSCJAG00000005393	CRNKL1	97	84.858	ENSTNIG00000010710	crnkl1	99	83.382	Tetraodon_nigroviridis
ENSCJAG00000005393	CRNKL1	92	96.835	ENSTBEG00000001304	CRNKL1	82	96.835	Tupaia_belangeri
ENSCJAG00000005393	CRNKL1	91	93.280	ENSTTRG00000000484	CRNKL1	81	93.354	Tursiops_truncatus
ENSCJAG00000005393	CRNKL1	100	97.234	ENSUAMG00000018586	CRNKL1	100	97.234	Ursus_americanus
ENSCJAG00000005393	CRNKL1	100	97.234	ENSUMAG00000024957	CRNKL1	100	97.234	Ursus_maritimus
ENSCJAG00000005393	CRNKL1	100	96.943	ENSVVUG00000012559	CRNKL1	82	96.943	Vulpes_vulpes
ENSCJAG00000005393	CRNKL1	99	90.102	ENSXETG00000009698	crnkl1	99	90.102	Xenopus_tropicalis
ENSCJAG00000005393	CRNKL1	97	85.607	ENSXCOG00000000824	crnkl1	91	84.041	Xiphophorus_couchianus
ENSCJAG00000005393	CRNKL1	97	86.486	ENSXMAG00000006896	crnkl1	91	84.897	Xiphophorus_maculatus