EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCJAG00000005671 (Gene tree)
Gene ID: -
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Callithrix_jacchus
Status: putative
Strand: Minus strand
Length: 17263 bases
Position: chrNTIC01011113.1:7446727-7463989
Accession: 30296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCJAP00000010446	RRM_1	PF00076.22	3.1e-28	1	3
ENSCJAP00000010446	RRM_1	PF00076.22	3.1e-28	2	3
ENSCJAP00000010446	RRM_1	PF00076.22	3.1e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCJAT00000011040	RAVER1-201	2274	-	ENSCJAP00000010446	757 (aa)	-	F7HU97

Gene Model

Click here to download ENSCJAG00000005671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCJAG00000005671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCJAG00000005671	RAVER1	64	45.539	ENSCJAG00000016724	RAVER2	79	45.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCJAG00000005671	RAVER1	100	95.905	ENSG00000161847	RAVER1	100	96.081	Homo_sapiens
ENSCJAG00000005671	RAVER1	66	59.325	ENSAPOG00000017267	raver1	62	59.325	Acanthochromis_polyacanthus
ENSCJAG00000005671	RAVER1	100	90.514	ENSAMEG00000011738	RAVER1	100	89.855	Ailuropoda_melanoleuca
ENSCJAG00000005671	RAVER1	66	59.200	ENSAOCG00000005128	raver1	65	59.200	Amphiprion_ocellaris
ENSCJAG00000005671	RAVER1	73	75.439	ENSAPEG00000010854	raver1	82	78.846	Amphiprion_percula
ENSCJAG00000005671	RAVER1	98	50.728	ENSATEG00000021004	raver1	94	50.000	Anabas_testudineus
ENSCJAG00000005671	RAVER1	82	60.714	ENSACAG00000008386	-	94	58.515	Anolis_carolinensis
ENSCJAG00000005671	RAVER1	100	97.886	ENSANAG00000028226	RAVER1	100	97.886	Aotus_nancymaae
ENSCJAG00000005671	RAVER1	70	85.417	ENSACLG00000018492	raver1	75	85.417	Astatotilapia_calliptera
ENSCJAG00000005671	RAVER1	97	51.265	ENSAMXG00000005132	raver1	75	56.239	Astyanax_mexicanus
ENSCJAG00000005671	RAVER1	100	89.432	ENSBTAG00000015721	RAVER1	100	94.484	Bos_taurus
ENSCJAG00000005671	RAVER1	100	89.564	ENSCAFG00000017861	RAVER1	100	89.564	Canis_familiaris
ENSCJAG00000005671	RAVER1	98	89.595	ENSCAFG00020024449	RAVER1	100	89.595	Canis_lupus_dingo
ENSCJAG00000005671	RAVER1	98	89.084	ENSCHIG00000006718	RAVER1	100	89.353	Capra_hircus
ENSCJAG00000005671	RAVER1	89	85.103	ENSTSYG00000027107	RAVER1	100	83.876	Carlito_syrichta
ENSCJAG00000005671	RAVER1	97	78.003	ENSCAPG00000002269	RAVER1	100	85.778	Cavia_aperea
ENSCJAG00000005671	RAVER1	98	89.204	ENSCPOG00000001008	RAVER1	100	88.124	Cavia_porcellus
ENSCJAG00000005671	RAVER1	100	98.018	ENSCCAG00000031723	RAVER1	100	98.018	Cebus_capucinus
ENSCJAG00000005671	RAVER1	100	95.509	ENSCATG00000043863	RAVER1	100	95.509	Cercocebus_atys
ENSCJAG00000005671	RAVER1	98	90.444	ENSCLAG00000009336	RAVER1	100	89.367	Chinchilla_lanigera
ENSCJAG00000005671	RAVER1	100	95.509	ENSCSAG00000007317	RAVER1	86	95.509	Chlorocebus_sabaeus
ENSCJAG00000005671	RAVER1	94	62.758	ENSCPBG00000005349	-	96	61.598	Chrysemys_picta_bellii
ENSCJAG00000005671	RAVER1	100	95.244	ENSCANG00000008337	RAVER1	100	95.244	Colobus_angolensis_palliatus
ENSCJAG00000005671	RAVER1	98	89.353	ENSCGRG00001013260	-	100	89.218	Cricetulus_griseus_chok1gshd
ENSCJAG00000005671	RAVER1	98	89.353	ENSCGRG00000015138	-	100	89.218	Cricetulus_griseus_crigri
ENSCJAG00000005671	RAVER1	95	48.473	ENSCSEG00000021092	raver1	78	78.846	Cynoglossus_semilaevis
ENSCJAG00000005671	RAVER1	95	50.205	ENSCVAG00000013971	raver1	68	57.371	Cyprinodon_variegatus
ENSCJAG00000005671	RAVER1	98	82.299	ENSDORG00000010106	-	100	81.110	Dipodomys_ordii
ENSCJAG00000005671	RAVER1	64	87.879	ENSETEG00000008201	-	75	86.441	Echinops_telfairi
ENSCJAG00000005671	RAVER1	64	94.789	ENSEASG00005010544	-	84	94.789	Equus_asinus_asinus
ENSCJAG00000005671	RAVER1	100	91.700	ENSECAG00000024966	RAVER1	100	91.700	Equus_caballus
ENSCJAG00000005671	RAVER1	96	51.701	ENSELUG00000023287	raver1	93	52.459	Esox_lucius
ENSCJAG00000005671	RAVER1	100	91.831	ENSFCAG00000009435	RAVER1	100	91.173	Felis_catus
ENSCJAG00000005671	RAVER1	98	89.637	ENSFDAG00000015113	RAVER1	100	88.829	Fukomys_damarensis
ENSCJAG00000005671	RAVER1	76	60.366	ENSGMOG00000003649	raver1	80	60.366	Gadus_morhua
ENSCJAG00000005671	RAVER1	65	46.293	ENSGALG00000050608	-	53	45.898	Gallus_gallus
ENSCJAG00000005671	RAVER1	99	50.461	ENSGAFG00000015944	raver1	70	57.795	Gambusia_affinis
ENSCJAG00000005671	RAVER1	94	63.102	ENSGAGG00000011748	-	96	76.344	Gopherus_agassizii
ENSCJAG00000005671	RAVER1	100	95.641	ENSGGOG00000006015	RAVER1	100	94.452	Gorilla_gorilla
ENSCJAG00000005671	RAVER1	98	89.098	ENSHGLG00000015460	RAVER1	100	88.291	Heterocephalus_glaber_female
ENSCJAG00000005671	RAVER1	98	89.098	ENSHGLG00100000812	RAVER1	100	88.291	Heterocephalus_glaber_male
ENSCJAG00000005671	RAVER1	96	50.000	ENSHCOG00000000449	raver1	66	58.268	Hippocampus_comes
ENSCJAG00000005671	RAVER1	95	53.224	ENSIPUG00000013153	raver1	89	57.195	Ictalurus_punctatus
ENSCJAG00000005671	RAVER1	98	91.509	ENSSTOG00000003241	RAVER1	100	90.836	Ictidomys_tridecemlineatus
ENSCJAG00000005671	RAVER1	98	90.336	ENSJJAG00000018219	-	100	89.128	Jaculus_jaculus
ENSCJAG00000005671	RAVER1	96	51.220	ENSKMAG00000017355	raver1	93	50.202	Kryptolebias_marmoratus
ENSCJAG00000005671	RAVER1	66	59.449	ENSLBEG00000008268	raver1	70	59.449	Labrus_bergylta
ENSCJAG00000005671	RAVER1	88	60.258	ENSLACG00000005809	-	99	60.028	Latimeria_chalumnae
ENSCJAG00000005671	RAVER1	94	55.930	ENSLOCG00000007500	raver1	94	52.949	Lepisosteus_oculatus
ENSCJAG00000005671	RAVER1	98	90.310	ENSLAFG00000003664	-	100	90.310	Loxodonta_africana
ENSCJAG00000005671	RAVER1	100	94.980	ENSMFAG00000037977	RAVER1	100	94.980	Macaca_fascicularis
ENSCJAG00000005671	RAVER1	100	95.244	ENSMMUG00000014897	RAVER1	100	95.244	Macaca_mulatta
ENSCJAG00000005671	RAVER1	100	95.244	ENSMNEG00000028390	RAVER1	100	95.244	Macaca_nemestrina
ENSCJAG00000005671	RAVER1	100	95.509	ENSMLEG00000041959	RAVER1	100	95.509	Mandrillus_leucophaeus
ENSCJAG00000005671	RAVER1	73	77.358	ENSMAMG00000012059	raver1	78	77.358	Mastacembelus_armatus
ENSCJAG00000005671	RAVER1	70	85.417	ENSMZEG00005019002	raver1	75	85.417	Maylandia_zebra
ENSCJAG00000005671	RAVER1	98	88.844	ENSMAUG00000017948	-	100	88.710	Mesocricetus_auratus
ENSCJAG00000005671	RAVER1	99	91.138	ENSMICG00000010326	RAVER1	99	90.528	Microcebus_murinus
ENSCJAG00000005671	RAVER1	98	89.757	ENSMOCG00000015553	-	100	89.623	Microtus_ochrogaster
ENSCJAG00000005671	RAVER1	96	51.421	ENSMMOG00000012093	raver1	67	59.046	Mola_mola
ENSCJAG00000005671	RAVER1	96	76.902	ENSMODG00000005584	-	91	76.351	Monodelphis_domestica
ENSCJAG00000005671	RAVER1	96	49.933	ENSMALG00000016569	raver1	82	58.869	Monopterus_albus
ENSCJAG00000005671	RAVER1	98	87.433	MGP_CAROLIEiJ_G0031860	-	100	87.299	Mus_caroli
ENSCJAG00000005671	RAVER1	98	87.433	ENSMUSG00000010205	Raver1	100	87.433	Mus_musculus
ENSCJAG00000005671	RAVER1	98	86.303	MGP_PahariEiJ_G0014726	-	100	87.101	Mus_pahari
ENSCJAG00000005671	RAVER1	98	87.299	MGP_SPRETEiJ_G0032984	-	100	87.299	Mus_spretus
ENSCJAG00000005671	RAVER1	100	92.358	ENSMPUG00000006712	RAVER1	100	91.436	Mustela_putorius_furo
ENSCJAG00000005671	RAVER1	98	89.189	ENSMLUG00000012328	RAVER1	100	88.919	Myotis_lucifugus
ENSCJAG00000005671	RAVER1	98	87.989	ENSNGAG00000001260	-	100	86.505	Nannospalax_galili
ENSCJAG00000005671	RAVER1	64	50.920	ENSNBRG00000010139	raver1	65	52.449	Neolamprologus_brichardi
ENSCJAG00000005671	RAVER1	99	94.562	ENSNLEG00000012181	RAVER1	100	94.320	Nomascus_leucogenys
ENSCJAG00000005671	RAVER1	88	75.708	ENSMEUG00000003281	-	100	73.591	Notamacropus_eugenii
ENSCJAG00000005671	RAVER1	98	90.040	ENSODEG00000016260	RAVER1	100	88.964	Octodon_degus
ENSCJAG00000005671	RAVER1	94	50.765	ENSONIG00000001559	raver1	99	51.676	Oreochromis_niloticus
ENSCJAG00000005671	RAVER1	100	84.676	ENSOCUG00000020918	RAVER1	100	83.223	Oryctolagus_cuniculus
ENSCJAG00000005671	RAVER1	67	66.423	ENSORLG00000005458	raver1	68	66.423	Oryzias_latipes
ENSCJAG00000005671	RAVER1	70	66.667	ENSORLG00020004392	raver1	68	66.667	Oryzias_latipes_hni
ENSCJAG00000005671	RAVER1	67	66.423	ENSORLG00015017222	raver1	68	66.423	Oryzias_latipes_hsok
ENSCJAG00000005671	RAVER1	60	81.633	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSCJAG00000005671	RAVER1	100	91.413	ENSOGAG00000011071	RAVER1	100	90.092	Otolemur_garnettii
ENSCJAG00000005671	RAVER1	100	87.879	ENSOARG00000015886	RAVER1	100	87.879	Ovis_aries
ENSCJAG00000005671	RAVER1	100	95.905	ENSPPAG00000002611	RAVER1	100	94.716	Pan_paniscus
ENSCJAG00000005671	RAVER1	100	92.227	ENSPPRG00000009912	RAVER1	100	91.568	Panthera_pardus
ENSCJAG00000005671	RAVER1	100	95.905	ENSPTRG00000010466	RAVER1	100	94.716	Pan_troglodytes
ENSCJAG00000005671	RAVER1	100	96.169	ENSPANG00000004122	RAVER1	100	96.169	Papio_anubis
ENSCJAG00000005671	RAVER1	98	89.367	ENSPEMG00000016411	-	100	89.502	Peromyscus_maniculatus_bairdii
ENSCJAG00000005671	RAVER1	98	77.912	ENSPCIG00000018695	-	100	77.510	Phascolarctos_cinereus
ENSCJAG00000005671	RAVER1	72	80.000	ENSPLAG00000020793	raver1	76	80.000	Poecilia_latipinna
ENSCJAG00000005671	RAVER1	95	52.174	ENSPMEG00000011220	raver1	68	67.734	Poecilia_mexicana
ENSCJAG00000005671	RAVER1	71	88.372	ENSPREG00000006864	raver1	77	88.372	Poecilia_reticulata
ENSCJAG00000005671	RAVER1	100	94.584	ENSPPYG00000010514	RAVER1	85	94.584	Pongo_abelii
ENSCJAG00000005671	RAVER1	100	91.853	ENSPCOG00000026605	RAVER1	100	91.327	Propithecus_coquereli
ENSCJAG00000005671	RAVER1	98	91.216	ENSPVAG00000003689	RAVER1	100	89.865	Pteropus_vampyrus
ENSCJAG00000005671	RAVER1	59	82.353	ENSPNYG00000013284	raver1	64	82.353	Pundamilia_nyererei
ENSCJAG00000005671	RAVER1	98	50.195	ENSPNAG00000015476	raver1	75	56.631	Pygocentrus_nattereri
ENSCJAG00000005671	RAVER1	98	87.701	ENSRNOG00000020710	Raver1	100	87.299	Rattus_norvegicus
ENSCJAG00000005671	RAVER1	100	95.773	ENSRBIG00000034702	RAVER1	100	94.716	Rhinopithecus_bieti
ENSCJAG00000005671	RAVER1	100	93.131	ENSRROG00000031186	RAVER1	100	92.338	Rhinopithecus_roxellana
ENSCJAG00000005671	RAVER1	100	94.452	ENSSBOG00000023423	RAVER1	100	94.452	Saimiri_boliviensis_boliviensis
ENSCJAG00000005671	RAVER1	88	76.662	ENSSHAG00000008181	-	90	76.219	Sarcophilus_harrisii
ENSCJAG00000005671	RAVER1	95	52.174	ENSSDUG00000021063	raver1	79	82.000	Seriola_dumerili
ENSCJAG00000005671	RAVER1	66	59.961	ENSSLDG00000014505	raver1	67	59.961	Seriola_lalandi_dorsalis
ENSCJAG00000005671	RAVER1	95	52.276	ENSSPAG00000000688	raver1	67	60.279	Stegastes_partitus
ENSCJAG00000005671	RAVER1	100	92.470	ENSSSCG00000013650	-	100	92.206	Sus_scrofa
ENSCJAG00000005671	RAVER1	96	50.946	ENSTRUG00000025641	raver1	67	59.566	Takifugu_rubripes
ENSCJAG00000005671	RAVER1	98	91.081	ENSTTRG00000009552	RAVER1	100	90.270	Tursiops_truncatus
ENSCJAG00000005671	RAVER1	100	92.490	ENSUAMG00000020385	RAVER1	100	91.831	Ursus_americanus
ENSCJAG00000005671	RAVER1	100	89.564	ENSVVUG00000028976	RAVER1	100	89.564	Vulpes_vulpes
ENSCJAG00000005671	RAVER1	98	55.397	ENSXETG00000011622	raver1	100	53.525	Xenopus_tropicalis
ENSCJAG00000005671	RAVER1	97	50.802	ENSXCOG00000016368	raver1	71	62.642	Xiphophorus_couchianus
ENSCJAG00000005671	RAVER1	97	50.602	ENSXMAG00000000217	raver1	80	59.332	Xiphophorus_maculatus